Genomic map of Mycobacterium phage Journey13 (KY798216)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY798216
Definition
Mycobacterium phage Journey13, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
48502
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
62.66
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ94603.1 KY798216_p64 hypothetical protein phrog_1562 unknown function unknown function -1 40975 41400
ARQ94662.1 KY798216_p11 portal protein phrog_104 portal protein head and packaging 1 8338 9777
ARQ94617.1 KY798216_p10 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6587 8341
ARQ94634.1 KY798216_p61 hypothetical protein phrog_12205 unknown function unknown function -1 39678 39806
ARQ94660.1 KY798216_p7 lysin A phrog_317 endolysin lysis 1 4346 5233
ARQ94628.1 KY798216_p60 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 38855 39544
ARQ94637.1 KY798216_p65 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 41458 42021
ARQ94592.1 KY798216_p42 hypothetical protein phrog_690 unknown function unknown function -1 30526 30735
ARQ94616.1 KY798216_p8 holin phrog_526 holin lysis 1 5230 5628
ARQ94666.1 KY798216_p17 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 12883 13074
ARQ94597.1 KY798216_p46 hypothetical protein phrog_2046 unknown function unknown function -1 34077 34280
ARQ94610.1 KY798216_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14965 15797
ARQ94614.1 KY798216_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 522 1331
ARQ94599.1 KY798216_p51 hypothetical protein phrog_1167 phosphofructokinase other -1 36054 36542
ARQ94659.1 KY798216_p6 tail protein phrog_1260 minor tail protein tail 1 3300 4268
ARQ94652.1 KY798216_p35 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 26959 27306
ARQ94595.1 KY798216_p41 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30176 30529
ARQ94593.1 KY798216_p43 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30737 31444
ARQ94626.1 KY798216_p58 hypothetical protein phrog_16665 unknown function unknown function -1 38400 38549
ARQ94636.1 KY798216_p63 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 40169 40978
ARQ94663.1 KY798216_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9807 10661
ARQ94650.1 KY798216_p31 integrase phrog_1 integrase integration and excision -1 24464 25582
ARQ94661.1 KY798216_p9 lysin B phrog_102 endolysin lysis 1 5628 6563
ARQ94658.1 KY798216_p5 terminase small subunit phrog_226 minor tail protein tail 1 2757 3224
ARQ94622.1 KY798216_p47 hypothetical protein phrog_499 unknown function unknown function -1 34277 34459
ARQ94600.1 KY798216_p52 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 36539 36811
ARQ94623.1 KY798216_p49 hypothetical protein phrog_2436 unknown function unknown function -1 35132 35290
ARQ94625.1 KY798216_p56 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 37796 38287
ARQ94633.1 KY798216_p81 hypothetical protein phrog_1676 unknown function unknown function -1 46915 47229
ARQ94631.1 KY798216_p79 hypothetical protein phrog_31763 unknown function unknown function -1 46546 46773
ARQ94656.1 KY798216_p21 major tail protein phrog_117 major tail protein tail 1 14241 14840
ARQ94630.1 KY798216_p78 hypothetical protein phrog_21975 unknown function unknown function -1 46335 46526
ARQ94651.1 KY798216_p32 membrane protein phrog_733 excisionase integration and excision 1 25973 26401
ARQ94602.1 KY798216_p55 hypothetical protein phrog_10918 unknown function unknown function -1 37657 37776
ARQ94672.1 KY798216_p68 membrane protein singleton unknown function unknown function -1 42879 43259
ARQ94605.1 KY798216_p27 minor tail protein phrog_352 minor tail protein tail 1 21141 21584
ARQ94646.1 KY798216_p75 hypothetical protein phrog_3207 unknown function unknown function -1 45438 45698
ARQ94612.1 KY798216_p25 minor tail protein phrog_106 minor tail protein tail 1 18317 19327
ARQ94619.1 KY798216_p14 major capsid protein phrog_10 major head protein head and packaging 1 11269 12270
ARQ94642.1 KY798216_p71 hypothetical protein phrog_2223 unknown function unknown function -1 43536 43844
ARQ94604.1 KY798216_p26 minor tail protein phrog_110 minor tail protein tail 1 19324 21123
ARQ94655.1 KY798216_p39 hypothetical protein singleton unknown function unknown function -1 28092 28370
ARQ94670.1 KY798216_p57 hypothetical protein singleton unknown function unknown function -1 38287 38403
ARQ94615.1 KY798216_p3 hypothetical protein phrog_4491 unknown function unknown function 1 2107 2421
ARQ94669.1 KY798216_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2424 2720
ARQ94649.1 KY798216_p30 hypothetical protein phrog_356 minor tail protein tail 1 23737 24387
ARQ94645.1 KY798216_p74 HTH DNA binding protein phrog_3906 unknown function unknown function -1 44666 45508
ARQ94648.1 KY798216_p29 minor tail protein phrog_737 minor tail protein tail 1 21908 23737
ARQ94640.1 KY798216_p69 membrane protein phrog_828 unknown function unknown function -1 43256 43468
ARQ94611.1 KY798216_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 15775 18291
ARQ94620.1 KY798216_p19 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13442 13795
ARQ94644.1 KY798216_p73 hypothetical protein phrog_3963 unknown function unknown function -1 44249 44569
ARQ94624.1 KY798216_p50 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 35287 36057
ARQ94657.1 KY798216_p2 VIP2-like toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1187 2110
ARQ94643.1 KY798216_p72 hypothetical protein phrog_586 unknown function unknown function -1 43841 44230
ARQ94632.1 KY798216_p80 hypothetical protein phrog_1445 unknown function unknown function -1 46808 46885
ARQ94594.1 KY798216_p40 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28380 30167
ARQ94627.1 KY798216_p59 hypothetical protein phrog_397 unknown function unknown function -1 38584 38823
ARQ94668.1 KY798216_p20 head-to-tail connector protein phrog_123 tail terminator connector 1 13804 14223
ARQ94638.1 KY798216_p66 hypothetical protein singleton unknown function unknown function -1 42278 42673
ARQ94618.1 KY798216_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10712 11236
ARQ94654.1 KY798216_p38 hypothetical protein phrog_896 unknown function unknown function -1 27874 28092
ARQ94653.1 KY798216_p37 hypothetical protein phrog_383 unknown function unknown function -1 27470 27874
ARQ94647.1 KY798216_p76 hypothetical protein phrog_3831 unknown function unknown function -1 45698 45895
ARQ94667.1 KY798216_p18 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13074 13442
ARQ94635.1 KY798216_p62 HTH DNA binding protein phrog_520 unknown function unknown function -1 39803 40039
ARQ94629.1 KY798216_p77 hypothetical protein phrog_7225 unknown function unknown function -1 46024 46254
ARQ94665.1 KY798216_p16 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 12509 12886
ARQ94601.1 KY798216_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 36811 37443
ARQ94596.1 KY798216_p45 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32026 34077
ARQ94664.1 KY798216_p15 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 12341 12505
ARQ94609.1 KY798216_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14965 15369
ARQ94608.1 KY798216_p36 hypothetical protein phrog_542 unknown function unknown function -1 27315 27473
ARQ94641.1 KY798216_p70 hypothetical protein phrog_9713 unknown function unknown function -1 43465 43539
ARQ94671.1 KY798216_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 37271 37660
ARQ94598.1 KY798216_p48 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 34443 35135
ARQ94621.1 KY798216_p44 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31511 32029
ARQ94607.1 KY798216_p33 membrane protein phrog_2697 unknown function unknown function -1 26510 26731
ARQ94606.1 KY798216_p28 minor tail protein phrog_404 minor tail protein tail 1 21581 21907
ARQ94639.1 KY798216_p67 hypothetical protein phrog_3351 unknown function unknown function -1 42670 42879
ARQ94613.1 KY798216_p34 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 26771 26962