| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY821088 |
Definition |
Bacillus phage Harambe, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
21684 |
Host Name |
Bacillus thuringiensis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
33 |
%GC |
35.29 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARM70151.1 | KY821088_p2 | ssDNA binding protein | phrog_6243 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 1271 | 1798 |
| ARM70161.1 | KY821088_p12 | uracil-DNA glycosylase inhibitor | phrog_13823 | unknown function | unknown function | 1 | 6735 | 6902 |
| ARM70180.1 | KY821088_p31 | hypothetical protein | phrog_31470 | unknown function | unknown function | -1 | 19961 | 20170 |
| ARM70181.1 | KY821088_p32 | early protein | phrog_6682 | GP16.7-like replication protein | DNA, RNA and nucleotide metabolism | -1 | 20167 | 20571 |
| ARM70150.1 | KY821088_p1 | hypothetical protein | phrog_6370 | dsDNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 466 | 786 |
| ARM70174.1 | KY821088_p25 | holin | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 17322 | 17552 |
| ARM70167.1 | KY821088_p18 | hypothetical protein | phrog_30573 | unknown function | unknown function | 1 | 9373 | 9555 |
| ARM70162.1 | KY821088_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6933 | 7061 |
| ARM70158.1 | KY821088_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5661 | 5798 |
| ARM70164.1 | KY821088_p15 | hypothetical protein | phrog_8978 | unknown function | unknown function | 1 | 7516 | 7719 |
| ARM70176.1 | KY821088_p27 | DNA encapsidation protein | phrog_2150 | terminase | head and packaging | 1 | 18280 | 19299 |
| ARM70152.1 | KY821088_p3 | transcription regulator | phrog_10365 | late transcriptional activator | transcription regulation | 1 | 1810 | 2208 |
| ARM70170.1 | KY821088_p21 | upper collar protein | phrog_2038 | upper collar connector | connector | 1 | 11900 | 12826 |
| ARM70153.1 | KY821088_p4 | terminal protein | phrog_6358 | DNA terminal protein | DNA, RNA and nucleotide metabolism | 1 | 2136 | 2888 |
| ARM70159.1 | KY821088_p10 | hypothetical protein | phrog_38557 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5805 | 6035 |
| ARM70175.1 | KY821088_p26 | endolysin | phrog_7 | endolysin | lysis | 1 | 17549 | 18283 |
| ARM70173.1 | KY821088_p24 | morphogenesis protein | phrog_9066 | endolysin | lysis | 1 | 16092 | 17309 |
| ARM70171.1 | KY821088_p22 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | 1 | 12802 | 13893 |
| ARM70165.1 | KY821088_p16 | scaffolding protein | phrog_10439 | head scaffolding protein | head and packaging | 1 | 7874 | 8182 |
| ARM70163.1 | KY821088_p14 | hypothetical protein | phrog_35801 | unknown function | unknown function | 1 | 7148 | 7513 |
| ARM70166.1 | KY821088_p17 | major capsid protein | phrog_2006 | major head protein | head and packaging | 1 | 8186 | 9346 |
| ARM70157.1 | KY821088_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5428 | 5661 |
| ARM70172.1 | KY821088_p23 | pre-neck appendage protein | phrog_7458 | tail spike protein | tail | 1 | 13906 | 16092 |
| ARM70177.1 | KY821088_p28 | hypothetical protein | phrog_27104 | unknown function | unknown function | -1 | 19313 | 19513 |
| ARM70156.1 | KY821088_p7 | hypothetical protein | phrog_30430 | unknown function | unknown function | 1 | 5141 | 5431 |
| ARM70182.1 | KY821088_p33 | hypothetical protein | phrog_33870 | unknown function | unknown function | -1 | 20596 | 21354 |
| ARM70155.1 | KY821088_p6 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 4796 | 5080 |
| ARM70178.1 | KY821088_p29 | hypothetical protein | phrog_38325 | unknown function | unknown function | -1 | 19510 | 19638 |
| ARM70169.1 | KY821088_p20 | tail knob protein | phrog_2248 | tail protein | tail | 1 | 10110 | 11900 |
| ARM70160.1 | KY821088_p11 | hypothetical protein | phrog_8992 | unknown function | unknown function | 1 | 6148 | 6738 |
| ARM70179.1 | KY821088_p30 | hypothetical protein | phrog_26935 | unknown function | unknown function | -1 | 19613 | 19768 |
| ARM70168.1 | KY821088_p19 | hypothetical protein | phrog_37759 | unknown function | unknown function | 1 | 9701 | 10096 |
| ARM70154.1 | KY821088_p5 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2956 | 4782 |