Genomic map of Salmonella phage LPST10 (KY860935)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY860935
Definition
Salmonella phage LPST10, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
47657
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
45.53
Number of singletons
8
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARK07798.1 KY860935_p66 hypothetical protein phrog_146 portal protein head and packaging -1 37030 38433
ARK07787.1 KY860935_p55 hypothetical protein phrog_16624 unknown function unknown function 1 31816 32124
ARK07771.1 KY860935_p39 hypothetical protein phrog_322 unknown function unknown function -1 25136 25483
ARK07803.1 KY860935_p71 hypothetical protein singleton unknown function unknown function 1 39469 39621
ARK07804.1 KY860935_p72 terminase large subunit phrog_2 terminase large subunit head and packaging -1 39650 41074
ARK07745.1 KY860935_p13 hypothetical protein phrog_384 virion structural protein head and packaging -1 11731 12204
ARK07774.1 KY860935_p42 hypothetical protein phrog_760 unknown function unknown function -1 27066 28352
ARK07759.1 KY860935_p27 hypothetical protein phrog_797 unknown function unknown function -1 21021 21362
ARK07750.1 KY860935_p18 hypothetical protein singleton unknown function unknown function 1 17328 17603
ARK07779.1 KY860935_p47 hypothetical protein phrog_1687 MarR family transcrition regulator transcription regulation -1 29679 30011
ARK07733.1 KY860935_p1 hypothetical protein singleton unknown function unknown function 1 751 903
ARK07805.1 KY860935_p73 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 41067 41579
ARK07734.1 KY860935_p2 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 890 1363
ARK07816.1 KY860935_p84 replicative DNA helicase phrog_33132 DNA primase DNA, RNA and nucleotide metabolism 1 45062 46549
ARK07763.1 KY860935_p31 hypothetical protein phrog_34767 unknown function unknown function -1 22489 22608
ARK07760.1 KY860935_p28 hypothetical protein phrog_786 unknown function unknown function -1 21359 21751
ARK07785.1 KY860935_p53 hypothetical protein phrog_17775 unknown function unknown function 1 31101 31592
ARK07748.1 KY860935_p16 tail length tape-measure protein 1 phrog_1107 tail length tape measure protein tail -1 13229 16522
ARK07739.1 KY860935_p7 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4892 5554
ARK07752.1 KY860935_p20 hypothetical protein phrog_17424 unknown function unknown function 1 18023 18166
ARK07770.1 KY860935_p38 hypothetical protein phrog_2138 unknown function unknown function -1 24946 25143
ARK07801.1 KY860935_p69 hypothetical protein phrog_13627 unknown function unknown function -1 38934 39104
ARK07761.1 KY860935_p29 hypothetical protein phrog_13738 membrane protein moron, auxiliary metabolic gene and host takeover -1 21732 21995
ARK07795.1 KY860935_p63 hypothetical protein phrog_21280 unknown function unknown function 1 34742 34885
ARK07782.1 KY860935_p50 hypothetical protein phrog_15697 unknown function unknown function -1 30401 30595
ARK07762.1 KY860935_p30 hypothetical protein phrog_14688 lipoprotein other -1 22049 22489
ARK07742.1 KY860935_p10 tail protein phrog_469 tail protein tail -1 8403 10835
ARK07757.1 KY860935_p25 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 20135 20626
ARK07755.1 KY860935_p23 hypothetical protein singleton unknown function unknown function -1 19303 19470
ARK07813.1 KY860935_p81 hypothetical protein phrog_16924 unknown function unknown function -1 43821 44003
ARK07749.1 KY860935_p17 hypothetical protein phrog_791 unknown function unknown function -1 16522 17229
ARK07743.1 KY860935_p11 tail assembly protein phrog_329 minor tail protein tail -1 10798 11268
ARK07773.1 KY860935_p41 coat protein phrog_766 head decoration head and packaging -1 26599 27066
ARK07809.1 KY860935_p77 hypothetical protein phrog_9340 unknown function unknown function -1 42578 42691
ARK07736.1 KY860935_p4 hypothetical protein phrog_824 unknown function unknown function 1 3276 3701
ARK07808.1 KY860935_p76 hypothetical protein phrog_5407 unknown function unknown function -1 42406 42585
ARK07807.1 KY860935_p75 hypothetical protein phrog_18384 unknown function unknown function -1 42246 42419
ARK07797.1 KY860935_p65 head decoration protein phrog_758 head morphogenesis head and packaging -1 36093 37049
ARK07802.1 KY860935_p70 hypothetical protein phrog_13301 unknown function unknown function -1 39108 39314
ARK07758.1 KY860935_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 20623 21021
ARK07772.1 KY860935_p40 coat protein phrog_771 virion structural protein head and packaging -1 25526 26596
ARK07783.1 KY860935_p51 hypothetical protein phrog_27614 unknown function unknown function -1 30606 30809
ARK07815.1 KY860935_p83 hypothetical protein phrog_28399 unknown function unknown function 1 44841 45062
ARK07786.1 KY860935_p54 hypothetical protein singleton unknown function unknown function 1 31589 31816
ARK07738.1 KY860935_p6 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 3918 4874
ARK07740.1 KY860935_p8 single stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 5558 6040
ARK07754.1 KY860935_p22 neck whiskers protein phrog_853 major tail protein tail -1 18388 19104
ARK07792.1 KY860935_p60 lysozyme phrog_10457 endolysin lysis -1 33426 33704
ARK07789.1 KY860935_p57 inner-membrane spanin protein Rz phrog_312 Rz-like spanin lysis -1 32264 32752
ARK07746.1 KY860935_p14 hypothetical protein singleton unknown function unknown function -1 12195 12308
ARK07799.1 KY860935_p67 hypothetical protein phrog_25285 unknown function unknown function -1 38480 38728
ARK07796.1 KY860935_p64 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 35095 35997
ARK07819.1 KY860935_p87 DNA primase/helicase singleton unknown function unknown function -1 47347 47559
ARK07793.1 KY860935_p61 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33805 34284
ARK07735.1 KY860935_p3 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 1367 3289
ARK07817.1 KY860935_p85 hypothetical protein phrog_38095 unknown function unknown function 1 46546 46905
ARK07769.1 KY860935_p37 DNA polymerase III beta subunit phrog_3007 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 24378 24914
ARK07784.1 KY860935_p52 hypothetical protein phrog_14963 unknown function unknown function 1 30910 31104
ARK07756.1 KY860935_p24 hypothetical protein phrog_782 unknown function unknown function -1 19590 19964
ARK07768.1 KY860935_p36 hypothetical protein phrog_4439 unknown function unknown function 1 24205 24378
ARK07778.1 KY860935_p46 hypothetical protein phrog_17117 unknown function unknown function -1 29537 29713
ARK07780.1 KY860935_p48 hypothetical protein phrog_34336 unknown function unknown function -1 30008 30166
ARK07776.1 KY860935_p44 hypothetical protein phrog_14549 unknown function unknown function -1 28799 29125
ARK07775.1 KY860935_p43 hypothetical protein phrog_18423 unknown function unknown function -1 28546 28692
ARK07751.1 KY860935_p19 hypothetical protein phrog_2315 unknown function unknown function 1 17720 18013
ARK07767.1 KY860935_p35 hypothetical protein singleton unknown function unknown function 1 23990 24208
ARK07812.1 KY860935_p80 hypothetical protein phrog_10786 unknown function unknown function -1 43551 43784
ARK07791.1 KY860935_p59 lysin phrog_90 endolysin lysis -1 32972 33436
ARK07747.1 KY860935_p15 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism 1 12341 13216
ARK07764.1 KY860935_p32 hypothetical protein phrog_14587 anti-restriction protein moron, auxiliary metabolic gene and host takeover 1 22725 22985
ARK07753.1 KY860935_p21 hypothetical protein phrog_924 unknown function unknown function 1 18163 18357
ARK07744.1 KY860935_p12 hypothetical protein phrog_396 minor tail protein tail -1 11261 11731
ARK07790.1 KY860935_p58 holin protein phrog_13249 holin lysis -1 32736 32975
ARK07811.1 KY860935_p79 eae protein phrog_492 unknown function unknown function -1 43093 43554
ARK07810.1 KY860935_p78 hypothetical protein phrog_3126 unknown function unknown function -1 42749 43096
ARK07806.1 KY860935_p74 hypothetical protein phrog_9747 unknown function unknown function -1 41683 42099
ARK07818.1 KY860935_p86 hypothetical protein phrog_29997 unknown function unknown function 1 46905 47315
ARK07737.1 KY860935_p5 hypothetical protein phrog_7393 unknown function unknown function 1 3741 3917
ARK07741.1 KY860935_p9 tail fibers protein phrog_1819 tail spike protein tail -1 6336 8363
ARK07794.1 KY860935_p62 hypothetical protein phrog_4334 unknown function unknown function 1 34355 34732
ARK07800.1 KY860935_p68 hypothetical protein phrog_26739 unknown function unknown function -1 38728 38934
ARK07814.1 KY860935_p82 hypothetical protein phrog_2180 unknown function unknown function -1 44184 44330
ARK07788.1 KY860935_p56 hypothetical protein phrog_1312 unknown function unknown function 1 32096 32251
ARK07781.1 KY860935_p49 zinc-binding domain of primase-helicase phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 30156 30404
ARK07777.1 KY860935_p45 hypothetical protein phrog_343 unknown function unknown function -1 29122 29553
ARK07766.1 KY860935_p34 transcriptional regulator phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 23181 23990
ARK07765.1 KY860935_p33 hypothetical protein phrog_8760 unknown function unknown function 1 22988 23179