Genomic map of Vibrio phage JSF15 (KY883642)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY883642
Definition
Vibrio phage JSF15, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
NUCCORE
Length
39643
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
50.71
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASV42823.1 KY883642_p23 hypothetical protein phrog_9197 unknown function unknown function -1 17009 17233
ASV42812.1 KY883642_p12 hypothetical protein phrog_2378 unknown function unknown function -1 10171 10638
ASV42839.1 KY883642_p39 hypothetical protein phrog_894 endolysin lysis 1 27974 28447
ASV42804.1 KY883642_p4 hypothetical protein phrog_10658 unknown function unknown function -1 2504 2665
ASV42808.1 KY883642_p8 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 4511 6799
ASV42842.1 KY883642_p42 hypothetical protein phrog_376 tail protein tail 1 31009 32793
ASV42831.1 KY883642_p31 hypothetical protein phrog_332 head-tail adaptor connector 1 22288 23931
ASV42815.1 KY883642_p15 hypothetical protein phrog_8941 unknown function unknown function -1 12588 13280
ASV42807.1 KY883642_p7 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 3438 4469
ASV42838.1 KY883642_p38 hypothetical protein phrog_8135 unknown function unknown function 1 27607 27972
ASV42803.1 KY883642_p3 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 2077 2514
ASV42801.1 KY883642_p1 EF hand domain/PKD domain protein phrog_8700 unknown function unknown function 1 345 1658
ASV42830.1 KY883642_p30 terminase phrog_2 terminase large subunit head and packaging 1 20571 22277
ASV42832.1 KY883642_p32 hypothetical protein phrog_9429 unknown function unknown function 1 23931 24158
ASV42845.1 KY883642_p45 hypothetical protein phrog_8824 unknown function unknown function 1 35284 36456
ASV42836.1 KY883642_p36 hypothetical protein phrog_8977 unknown function unknown function 1 26478 26747
ASV42840.1 KY883642_p40 hypothetical protein phrog_8910 unknown function unknown function 1 28440 28742
ASV42814.1 KY883642_p14 hypothetical protein phrog_9940 unknown function unknown function -1 12235 12588
ASV42810.1 KY883642_p10 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 8699 9175
ASV42846.1 KY883642_p46 hypothetical protein phrog_684 virion structural protein head and packaging 1 36458 38806
ASV42802.1 KY883642_p2 hypothetical protein phrog_474 phosphofructokinase other -1 1683 2000
ASV42819.1 KY883642_p19 hypothetical protein phrog_9688 unknown function unknown function -1 14677 15477
ASV42816.1 KY883642_p16 hypothetical protein phrog_4049 unknown function unknown function -1 13430 13849
ASV42813.1 KY883642_p13 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 10701 12170
ASV42818.1 KY883642_p18 hypothetical protein phrog_9382 unknown function unknown function -1 14303 14629
ASV42805.1 KY883642_p5 hydrolase phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 2662 3174
ASV42817.1 KY883642_p17 hypothetical protein phrog_3392 unknown function unknown function -1 13891 14301
ASV42828.1 KY883642_p28 hypothetical protein phrog_9836 unknown function unknown function 1 19846 20067
ASV42824.1 KY883642_p24 hypothetical protein phrog_9131 unknown function unknown function -1 17311 17601
ASV42820.1 KY883642_p20 hypothetical protein phrog_9060 unknown function unknown function -1 15546 16031
ASV42844.1 KY883642_p44 hypothetical protein phrog_9153 unknown function unknown function 1 33200 35284
ASV42825.1 KY883642_p25 hypothetical protein phrog_9346 unknown function unknown function -1 17708 17947
ASV42829.1 KY883642_p29 hypothetical protein phrog_8823 terminase small subunit head and packaging 1 20084 20584
ASV42835.1 KY883642_p35 hypothetical protein phrog_3437 major head protein head and packaging 1 25443 26411
ASV42841.1 KY883642_p41 PE family protein phrog_9239 tail tubular protein tail 1 28766 31000
ASV42827.1 KY883642_p27 hypothetical protein phrog_29496 unknown function unknown function -1 19137 19406
ASV42811.1 KY883642_p11 hypothetical protein phrog_2402 unknown function unknown function -1 9241 10050
ASV42826.1 KY883642_p26 hypothetical protein phrog_8878 unknown function unknown function -1 17958 18548
ASV42821.1 KY883642_p21 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 16041 16535
ASV42806.1 KY883642_p6 hypothetical protein phrog_9860 unknown function unknown function -1 3176 3436
ASV42837.1 KY883642_p37 hypothetical protein phrog_8869 unknown function unknown function 1 26762 27610
ASV42843.1 KY883642_p43 hypothetical protein phrog_9290 unknown function unknown function 1 32799 33203
ASV42833.1 KY883642_p33 hypothetical protein phrog_5977 unknown function unknown function 1 24171 24428
ASV42834.1 KY883642_p34 hypothetical protein phrog_3742 unknown function unknown function 1 24433 25275
ASV42809.1 KY883642_p9 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 6789 8690
ASV42822.1 KY883642_p22 hypothetical protein phrog_9495 unknown function unknown function -1 16638 17012