Genomic map of Vibrio phage JSF33 (KY883647)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY883647
Definition
Vibrio phage JSF33, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
NUCCORE
Length
39661
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
50.64
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASV43043.1 KY883647_p6 hypothetical protein phrog_9131 unknown function unknown function 1 4820 5110
ASV43061.1 KY883647_p24 hypothetical protein phrog_9860 unknown function unknown function 1 18985 19245
ASV43064.1 KY883647_p27 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 19907 20344
ASV43056.1 KY883647_p19 hypothetical protein phrog_2402 unknown function unknown function 1 12371 13180
ASV43051.1 KY883647_p14 hypothetical protein phrog_4049 unknown function unknown function 1 8572 8991
ASV43052.1 KY883647_p15 hypothetical protein phrog_8941 unknown function unknown function 1 9141 9833
ASV43039.1 KY883647_p2 hypothetical protein phrog_9836 unknown function unknown function -1 2358 2579
ASV43079.1 KY883647_p42 hypothetical protein phrog_3437 major head protein head and packaging -1 35539 36507
ASV43058.1 KY883647_p21 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13764 15632
ASV43042.1 KY883647_p5 hypothetical protein phrog_9346 unknown function unknown function 1 4474 4713
ASV43045.1 KY883647_p8 hypothetical protein phrog_9495 unknown function unknown function 1 5409 5783
ASV43044.1 KY883647_p7 hypothetical protein phrog_9197 unknown function unknown function 1 5188 5412
ASV43054.1 KY883647_p17 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 10251 11720
ASV43048.1 KY883647_p11 hypothetical protein phrog_9688 unknown function unknown function 1 6974 7744
ASV43041.1 KY883647_p4 hypothetical protein phrog_8878 unknown function unknown function 1 3873 4463
ASV43074.1 KY883647_p37 hypothetical protein phrog_8910 unknown function unknown function -1 33208 33510
ASV43078.1 KY883647_p41 hypothetical protein phrog_8977 unknown function unknown function -1 35203 35472
ASV43046.1 KY883647_p9 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover 1 5886 6380
ASV43076.1 KY883647_p39 hypothetical protein phrog_8135 unknown function unknown function -1 33978 34343
ASV43047.1 KY883647_p10 hypothetical protein phrog_9060 unknown function unknown function 1 6390 6875
ASV43063.1 KY883647_p26 hypothetical protein phrog_10658 unknown function unknown function 1 19756 19917
ASV43071.1 KY883647_p34 hypothetical protein phrog_9290 unknown function unknown function -1 28759 29157
ASV43049.1 KY883647_p12 hypothetical protein phrog_9382 unknown function unknown function 1 7792 8118
ASV43073.1 KY883647_p36 PE family protein phrog_9239 tail tubular protein tail -1 30953 33184
ASV43075.1 KY883647_p38 hypothetical protein phrog_894 endolysin lysis -1 33503 33976
ASV43068.1 KY883647_p31 hypothetical protein phrog_684 virion structural protein head and packaging -1 23156 25504
ASV43057.1 KY883647_p20 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 13246 13722
ASV43066.1 KY883647_p29 EF hand domain/PKD domain protein phrog_8700 unknown function unknown function -1 20764 22077
ASV43077.1 KY883647_p40 hypothetical protein phrog_8869 unknown function unknown function -1 34340 35146
ASV43055.1 KY883647_p18 hypothetical protein phrog_2378 unknown function unknown function 1 11783 12250
ASV43069.1 KY883647_p32 hypothetical protein phrog_8824 unknown function unknown function -1 25506 26678
ASV43040.1 KY883647_p3 hypothetical protein phrog_12668 unknown function unknown function 1 3023 3292
ASV43067.1 KY883647_p30 tail fibers protein phrog_4440 tail fiber protein tail -1 22079 23152
ASV43081.1 KY883647_p44 hypothetical protein phrog_5977 unknown function unknown function -1 37531 37788
ASV43082.1 KY883647_p45 hypothetical protein phrog_9429 unknown function unknown function -1 37801 38028
ASV43080.1 KY883647_p43 hypothetical protein phrog_3742 unknown function unknown function -1 36675 37526
ASV43050.1 KY883647_p13 hypothetical protein phrog_3392 unknown function unknown function 1 8120 8530
ASV43065.1 KY883647_p28 hypothetical protein phrog_474 phosphofructokinase other 1 20364 20738
ASV43038.1 KY883647_p1 hypothetical protein phrog_8823 terminase small subunit head and packaging -1 1841 2341
ASV43072.1 KY883647_p35 exonuclease SbcC phrog_376 tail protein tail -1 29160 30944
ASV43053.1 KY883647_p16 hypothetical protein phrog_9940 unknown function unknown function 1 9833 10186
ASV43062.1 KY883647_p25 hydrolase phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism 1 19247 19759
ASV43083.1 KY883647_p46 hypothetical protein phrog_332 head-tail adaptor connector -1 38028 39635
ASV43070.1 KY883647_p33 hypothetical protein phrog_9153 unknown function unknown function -1 26678 28762
ASV43059.1 KY883647_p22 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 15622 17910
ASV43060.1 KY883647_p23 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism 1 17952 18983