Genomic map of Vibrio phage JSF20 (KY883651)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Vibrio phage JSF20, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; unclassified Chatterjeevirus.
DB of origin
Host Name
Vibrio cholerae
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASV43251.1 KY883651_p26 nucleotide reductase subunit C phrog_2294 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 24121 24534
ASV43261.1 KY883651_p36 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 28948 30669
ASV43232.1 KY883651_p7 tail fibers protein phrog_6256 tail fiber protein tail -1 4062 5801
ASV43233.1 KY883651_p8 protein inside capsid D phrog_342 internal virion protein with endolysin domain head and packaging -1 5881 9264
ASV43259.1 KY883651_p34 hypothetical protein phrog_10620 unknown function unknown function -1 28029 28487
ASV43255.1 KY883651_p30 hypothetical protein phrog_10513 unknown function unknown function -1 25045 25437
ASV43236.1 KY883651_p11 protein inside capsid A phrog_308 internal virion protein head and packaging -1 12099 12617
ASV43245.1 KY883651_p20 hypothetical protein phrog_1391 unknown function unknown function -1 20920 21171
ASV43252.1 KY883651_p27 HNS binding protein phrog_1334 unknown function unknown function -1 24534 24731
ASV43248.1 KY883651_p23 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism -1 22038 22490
ASV43227.1 KY883651_p2 hypothetical protein phrog_10167 unknown function unknown function -1 2694 2891
ASV43247.1 KY883651_p22 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis -1 21604 22038
ASV43263.1 KY883651_p38 hypothetical protein phrog_5138 unknown function unknown function -1 30953 31348
ASV43249.1 KY883651_p24 ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22490 23161
ASV43254.1 KY883651_p29 hypothetical protein phrog_11673 unknown function unknown function -1 24867 25058
ASV43231.1 KY883651_p6 class II holin phrog_920 holin lysis -1 3846 4040
ASV43240.1 KY883651_p15 capsid and scaffold protein phrog_267 major head protein head and packaging -1 16385 17512
ASV43273.1 KY883651_p48 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other -1 38247 38678
ASV43250.1 KY883651_p25 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 23253 24128
ASV43234.1 KY883651_p9 protein inside capsid C phrog_1339 internal virion protein head and packaging -1 9277 11454
ASV43267.1 KY883651_p42 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 32222 32905
ASV43241.1 KY883651_p16 capsid and scaffold protein phrog_1052 head assembly head and packaging -1 17631 18491
ASV43242.1 KY883651_p17 head-to-tail joining protein phrog_449 head-tail adaptor connector -1 18571 20169
ASV43266.1 KY883651_p41 host RNA polymerase inhibitory protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism -1 32007 32180
ASV43230.1 KY883651_p5 hypothetical protein phrog_12315 unknown function unknown function -1 3298 3729
ASV43253.1 KY883651_p28 hypothetical protein phrog_14683 unknown function unknown function -1 24743 24913
ASV43256.1 KY883651_p31 hypothetical protein phrog_10985 unknown function unknown function -1 25567 25731
ASV43270.1 KY883651_p45 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 34693 37344
ASV43257.1 KY883651_p32 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 25742 27778
ASV43269.1 KY883651_p44 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 33527 34507
ASV43260.1 KY883651_p35 hypothetical protein phrog_10688 unknown function unknown function -1 28573 28887
ASV43229.1 KY883651_p4 DNA packaging protein A phrog_1351 terminase small subunit head and packaging -1 3053 3286
ASV43268.1 KY883651_p43 hypothetical protein phrog_11350 unknown function unknown function -1 32917 33243
ASV43262.1 KY883651_p37 hypothetical protein phrog_11152 unknown function unknown function -1 30651 30848
ASV43237.1 KY883651_p12 proton/sodium-glutamate symport protein phrog_761 thymidylate kinase other -1 12610 13242
ASV43246.1 KY883651_p21 hypothetical protein phrog_1447 unknown function unknown function -1 21187 21468
ASV43265.1 KY883651_p40 hypothetical protein phrog_11648 unknown function unknown function -1 31684 31836
ASV43226.1 KY883651_p1 DNA packaging protein phrog_38 terminase large subunit head and packaging -1 859 2619
ASV43239.1 KY883651_p14 tail tubular protein A phrog_446 tail protein tail -1 15726 16319
ASV43238.1 KY883651_p13 tail tubular protein B phrog_457 tail protein tail -1 13330 15714
ASV43258.1 KY883651_p33 hypothetical protein phrog_10848 unknown function unknown function -1 27785 28042
ASV43272.1 KY883651_p47 hypothetical protein phrog_11474 unknown function unknown function -1 37935 38126
ASV43243.1 KY883651_p18 host specificity protein B phrog_10099 unknown function unknown function -1 20187 20477
ASV43228.1 KY883651_p3 hypothetical protein phrog_4712 holin lysis -1 2891 3034
ASV43264.1 KY883651_p39 hypothetical protein phrog_10197 unknown function unknown function -1 31364 31645
ASV43271.1 KY883651_p46 hypothetical protein phrog_13599 unknown function unknown function -1 37738 37938
ASV43235.1 KY883651_p10 protein inside capsid B phrog_805 internal virion protein head and packaging -1 11522 12106
ASV43244.1 KY883651_p19 host specificity protein A phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover -1 20477 20884