Genomic map of Vibrio phage JSF27 (KY883658)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY883658
Definition
Vibrio phage JSF27, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
48690
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
42.45
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASV43857.1 KY883658_p67 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 47438 47776
ASV43839.1 KY883658_p49 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 37462 38274
ASV43834.1 KY883658_p44 aerobic cobaltochelatase CobT subunit phrog_17276 aerobic cobaltochelatase CobT subunit moron, auxiliary metabolic gene and host takeover 1 33719 35461
ASV43808.1 KY883658_p18 hypothetical protein phrog_18422 unknown function unknown function -1 15579 16088
ASV43849.1 KY883658_p59 hypothetical protein phrog_18273 unknown function unknown function 1 44258 44476
ASV43829.1 KY883658_p39 hypothetical protein phrog_1965 unknown function unknown function 1 31417 32010
ASV43827.1 KY883658_p37 hypothetical protein phrog_18100 unknown function unknown function 1 30465 30797
ASV43813.1 KY883658_p23 terminase large subunit phrog_38 terminase large subunit head and packaging -1 19948 21474
ASV43811.1 KY883658_p21 hypothetical protein phrog_8956 unknown function unknown function -1 17953 18192
ASV43797.1 KY883658_p7 hypothetical protein phrog_21136 unknown function unknown function -1 2331 2627
ASV43806.1 KY883658_p16 hypothetical protein phrog_18064 unknown function unknown function -1 13260 13673
ASV43818.1 KY883658_p28 tail fiber protein phrog_17587 tail fiber protein tail -1 24523 26448
ASV43799.1 KY883658_p9 hypothetical protein phrog_12003 internal virion protein head and packaging -1 4619 8869
ASV43836.1 KY883658_p46 hypothetical protein phrog_17083 unknown function unknown function 1 36602 36904
ASV43815.1 KY883658_p25 hypothetical protein phrog_2432 unknown function unknown function -1 22023 22301
ASV43859.1 KY883658_p69 hypothetical protein phrog_20277 unknown function unknown function 1 48369 48581
ASV43816.1 KY883658_p26 PE family protein phrog_10745 unknown function unknown function -1 22311 23360
ASV43826.1 KY883658_p36 hypothetical protein phrog_21997 unknown function unknown function 1 30250 30444
ASV43828.1 KY883658_p38 hypothetical protein phrog_16974 unknown function unknown function 1 30852 31349
ASV43796.1 KY883658_p6 hypothetical protein phrog_3899 unknown function unknown function -1 2063 2362
ASV43791.1 KY883658_p1 hypothetical protein phrog_11040 unknown function unknown function 1 428 646
ASV43820.1 KY883658_p30 hypothetical protein phrog_14737 unknown function unknown function 1 28461 28952
ASV43844.1 KY883658_p54 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41733 42182
ASV43854.1 KY883658_p64 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 46076 46513
ASV43817.1 KY883658_p27 hypothetical protein phrog_14064 tail fiber protein tail -1 23370 24512
ASV43804.1 KY883658_p14 hypothetical protein phrog_7592 tail protein tail -1 12179 12973
ASV43838.1 KY883658_p48 hypothetical protein phrog_19971 unknown function unknown function 1 37203 37493
ASV43802.1 KY883658_p12 hypothetical protein phrog_8094 tail appendage tail -1 9783 11987
ASV43795.1 KY883658_p5 hypothetical protein phrog_16830 unknown function unknown function -1 1753 2082
ASV43858.1 KY883658_p68 thymidine kinase phrog_592 thymidine kinase other 1 47776 48372
ASV43814.1 KY883658_p24 hypothetical protein phrog_8035 unknown function unknown function -1 21467 21970
ASV43805.1 KY883658_p15 hypothetical protein phrog_4590 unknown function unknown function -1 12973 13260
ASV43856.1 KY883658_p66 hypothetical protein phrog_19822 unknown function unknown function 1 47199 47441
ASV43850.1 KY883658_p60 hypothetical protein phrog_16403 unknown function unknown function 1 44640 44906
ASV43848.1 KY883658_p58 hypothetical protein phrog_19119 unknown function unknown function 1 44013 44255
ASV43837.1 KY883658_p47 hypothetical protein phrog_16777 unknown function unknown function 1 36885 37148
ASV43846.1 KY883658_p56 endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 43125 43415
ASV43841.1 KY883658_p51 hypothetical protein phrog_16700 unknown function unknown function 1 38801 39220
ASV43801.1 KY883658_p11 hypothetical protein phrog_1249 acetyltransferase other -1 9334 9786
ASV43852.1 KY883658_p62 hypothetical protein phrog_19549 unknown function unknown function 1 45729 45971
ASV43822.1 KY883658_p32 hypothetical protein phrog_14633 unknown function unknown function 1 29154 29384
ASV43794.1 KY883658_p4 hypothetical protein phrog_2452 unknown function unknown function 1 1380 1676
ASV43793.1 KY883658_p3 hypothetical protein phrog_19358 unknown function unknown function 1 954 1202
ASV43835.1 KY883658_p45 aerobic cobaltochelatase CobS subunit phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 35477 36592
ASV43830.1 KY883658_p40 hypothetical protein phrog_17353 unknown function unknown function 1 32014 32382
ASV43855.1 KY883658_p65 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 46510 47199
ASV43847.1 KY883658_p57 hypothetical protein phrog_18140 unknown function unknown function 1 43461 43955
ASV43853.1 KY883658_p63 hypothetical protein phrog_25943 unknown function unknown function 1 45964 46095
ASV43832.1 KY883658_p42 hypothetical protein phrog_18043 unknown function unknown function 1 33240 33416
ASV43792.1 KY883658_p2 hypothetical protein phrog_21384 unknown function unknown function 1 646 957
ASV43819.1 KY883658_p29 hypothetical protein phrog_15513 unknown function unknown function 1 28201 28443
ASV43823.1 KY883658_p33 hypothetical protein phrog_22803 unknown function unknown function 1 29461 29664
ASV43803.1 KY883658_p13 hypothetical protein phrog_9082 unknown function unknown function -1 11968 12168
ASV43824.1 KY883658_p34 hypothetical protein phrog_18025 unknown function unknown function 1 29722 29973
ASV43810.1 KY883658_p20 hypothetical protein phrog_7931 unknown function unknown function -1 17150 17899
ASV43798.1 KY883658_p8 hypothetical protein phrog_17082 unknown function unknown function -1 2630 4612
ASV43840.1 KY883658_p50 hypothetical protein phrog_18510 unknown function unknown function 1 38265 38798
ASV43851.1 KY883658_p61 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 44908 45759
ASV43821.1 KY883658_p31 hypothetical protein phrog_21943 unknown function unknown function 1 29026 29157
ASV43825.1 KY883658_p35 hypothetical protein phrog_17158 unknown function unknown function 1 29992 30180
ASV43845.1 KY883658_p55 DNA polymerase I phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 42209 43042
ASV43831.1 KY883658_p41 hypothetical protein phrog_17022 unknown function unknown function 1 32448 33167
ASV43809.1 KY883658_p19 hypothetical protein phrog_267 major head protein head and packaging -1 16158 17129
ASV43807.1 KY883658_p17 hypothetical protein phrog_17462 unknown function unknown function -1 13866 15494
ASV43800.1 KY883658_p10 hypothetical protein phrog_8168 unknown function unknown function -1 8886 9332
ASV43833.1 KY883658_p43 hypothetical protein phrog_33597 unknown function unknown function 1 33505 33717
ASV43842.1 KY883658_p52 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 39217 40473
ASV43843.1 KY883658_p53 DNA polymerase I phrog_9556 DNA polymerase DNA, RNA and nucleotide metabolism 1 40474 41673
ASV43812.1 KY883658_p22 portal (connector) protein phrog_332 head-tail adaptor connector -1 18203 19948