Genomic map of Salmonella phage SE1 (in:P22virus) (KY926791)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY926791
Definition
Salmonella phage SE1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus SE1Spa.
DB of origin
NUCCORE
Length
60030
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
43.38
Number of singletons
10
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM70075.1 KY926791_p20 hypothetical protein phrog_206 head scaffolding protein head and packaging -1 14827 15705
ARM70129.1 KY926791_p74 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 41900 43903
ARM70087.1 KY926791_p32 hypothetical protein phrog_4049 unknown function unknown function -1 22463 22903
ARM70104.1 KY926791_p49 hypothetical protein phrog_5321 unknown function unknown function 1 29319 29588
ARM70080.1 KY926791_p25 hypothetical protein phrog_785 holin lysis -1 19842 20099
ARM70135.1 KY926791_p80 glutamine amidotransferases class-II (GATase) / 7-cyano-7-deazaguanine synthase phrog_10428 L-glutamine-D-fructose-6-phosphate aminotransferase other 1 47448 48863
ARM70093.1 KY926791_p38 hypothetical protein phrog_17772 unknown function unknown function 1 24968 25447
ARM70069.1 KY926791_p14 hypothetical protein phrog_161 head closure Hc1 connector -1 11141 11515
ARM70126.1 KY926791_p71 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39229 39975
ARM70074.1 KY926791_p19 hypothetical protein phrog_247 major head protein head and packaging -1 13585 14688
ARM70091.1 KY926791_p36 hypothetical protein phrog_21392 unknown function unknown function -1 23693 23980
ARM70059.1 KY926791_p4 hypothetical protein phrog_2048 tail protein tail -1 3781 4365
ARM70057.1 KY926791_p2 tail fiber protein phrog_31 central tail fiber J tail -1 733 3372
ARM70116.1 KY926791_p61 hypothetical protein phrog_2993 unknown function unknown function 1 34757 35065
ARM70121.1 KY926791_p66 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 36310 36819
ARM70108.1 KY926791_p53 hypothetical protein singleton unknown function unknown function 1 30836 31885
ARM70143.1 KY926791_p88 hypothetical protein phrog_7239 unknown function unknown function -1 55127 55396
ARM70122.1 KY926791_p67 hypothetical protein phrog_32702 unknown function unknown function 1 36890 37207
ARM70066.1 KY926791_p11 hypothetical protein phrog_290 minor tail protein tail -1 9311 10255
ARM70106.1 KY926791_p51 hypothetical protein phrog_19703 unknown function unknown function 1 30091 30327
ARM70095.1 KY926791_p40 hypothetical protein phrog_3199 unknown function unknown function 1 25717 25965
ARM70133.1 KY926791_p78 queuosine biosynthesis protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 45863 46627
ARM70130.1 KY926791_p75 hypothetical protein phrog_24889 unknown function unknown function 1 43911 44150
ARM70148.1 KY926791_p93 hypothetical protein phrog_2636 tail fiber protein tail -1 58358 59647
ARM70137.1 KY926791_p82 GTP cyclohydrolase I type 1 phrog_2197 GTP cyclohydrolase other 1 49425 50024
ARM70081.1 KY926791_p26 hypothetical protein phrog_873 endolysin head and packaging -1 20164 20598
ARM70062.1 KY926791_p7 tail length tape-measure protein 1 phrog_3519 tail length tape measure protein tail -1 6413 8221
ARM70138.1 KY926791_p83 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 50094 50582
ARM70140.1 KY926791_p85 hypothetical protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 51537 52529
ARM70077.1 KY926791_p22 terminase large subunit phrog_2 terminase large subunit head and packaging -1 17355 18953
ARM70102.1 KY926791_p47 hypothetical protein phrog_1972 unknown function unknown function 1 28722 29108
ARM70118.1 KY926791_p63 hypothetical protein phrog_20894 unknown function unknown function 1 35238 35513
ARM70094.1 KY926791_p39 hypothetical protein phrog_5461 unknown function unknown function 1 25526 25711
ARM70123.1 KY926791_p68 hypothetical protein phrog_2480 unknown function unknown function 1 37217 37642
ARM70128.1 KY926791_p73 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 40949 41899
ARM70131.1 KY926791_p76 hypothetical protein phrog_7864 unknown function unknown function 1 44151 44873
ARM70060.1 KY926791_p5 hypothetical protein singleton unknown function unknown function -1 4582 4956
ARM70082.1 KY926791_p27 hypothetical protein phrog_312 Rz-like spanin lysis -1 20721 21221
ARM70103.1 KY926791_p48 hypothetical protein phrog_18528 unknown function unknown function 1 29101 29316
ARM70117.1 KY926791_p62 hypothetical protein phrog_11457 unknown function unknown function 1 35062 35241
ARM70132.1 KY926791_p77 hypothetical protein phrog_11298 unknown function unknown function 1 44970 45794
ARM70083.1 KY926791_p28 hypothetical protein phrog_19774 unknown function unknown function -1 21203 21430
ARM70101.1 KY926791_p46 hypothetical protein phrog_17615 unknown function unknown function 1 28382 28732
ARM70078.1 KY926791_p23 hypothetical protein phrog_5334 terminase small subunit head and packaging -1 18922 19473
ARM70105.1 KY926791_p50 hypothetical protein phrog_17122 unknown function unknown function 1 29604 30017
ARM70136.1 KY926791_p81 6-carboxytetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 48865 49398
ARM70098.1 KY926791_p43 hypothetical protein singleton unknown function unknown function 1 27107 27211
ARM70100.1 KY926791_p45 hypothetical protein phrog_16944 unknown function unknown function 1 28113 28382
ARM70149.1 KY926791_p1 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover 1 59764 60030
ARM70149.1 KY926791_p1 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover 1 1 699
ARM70114.1 KY926791_p59 hypothetical protein phrog_9414 unknown function unknown function 1 34318 34527
ARM70063.1 KY926791_p8 hypothetical protein phrog_4966 unknown function unknown function -1 8221 8559
ARM70096.1 KY926791_p41 hypothetical protein phrog_18706 unknown function unknown function 1 25975 26139
ARM70058.1 KY926791_p3 hypothetical protein phrog_2134 unknown function unknown function -1 3372 3806
ARM70085.1 KY926791_p30 hypothetical protein phrog_1040 peptidase HslV family other -1 21615 22109
ARM70139.1 KY926791_p84 hypothetical protein phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 50575 51528
ARM70141.1 KY926791_p86 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52526 53086
ARM70067.1 KY926791_p12 hypothetical protein phrog_179 tail terminator connector -1 10258 10725
ARM70076.1 KY926791_p21 hypothetical protein phrog_145 portal protein head and packaging -1 15816 17342
ARM70090.1 KY926791_p35 hypothetical protein singleton unknown function unknown function -1 23604 23693
ARM70079.1 KY926791_p24 hypothetical protein phrog_16688 unknown function unknown function -1 19603 19839
ARM70109.1 KY926791_p54 hypothetical protein singleton unknown function unknown function 1 31893 32888
ARM70125.1 KY926791_p70 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 38220 39164
ARM70084.1 KY926791_p29 hypothetical protein phrog_12090 unknown function unknown function -1 21427 21618
ARM70112.1 KY926791_p57 hypothetical protein phrog_9346 unknown function unknown function 1 33542 33739
ARM70092.1 KY926791_p37 hypothetical protein phrog_13865 unknown function unknown function 1 24586 24891
ARM70061.1 KY926791_p6 hypothetical protein singleton unknown function unknown function -1 4959 6362
ARM70127.1 KY926791_p72 hypothetical protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 39975 40886
ARM70110.1 KY926791_p55 hypothetical protein phrog_17131 unknown function unknown function -1 32917 33147
ARM70113.1 KY926791_p58 hypothetical protein singleton unknown function unknown function 1 33754 34317
ARM70144.1 KY926791_p89 hypothetical protein phrog_8329 unknown function unknown function -1 55393 55941
ARM70086.1 KY926791_p31 hypothetical protein phrog_17085 unknown function unknown function -1 22106 22459
ARM70119.1 KY926791_p64 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35700 36161
ARM70072.1 KY926791_p17 hypothetical protein phrog_10966 unknown function unknown function -1 12361 13032
ARM70070.1 KY926791_p15 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 11512 12015
ARM70145.1 KY926791_p90 hypothetical protein phrog_9157 unknown function unknown function -1 55958 56323
ARM70142.1 KY926791_p87 hypothetical protein phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism 1 53083 55056
ARM70065.1 KY926791_p10 tail fiber protein singleton unknown function unknown function -1 9073 9342
ARM70089.1 KY926791_p34 hypothetical protein phrog_17838 unknown function unknown function -1 23242 23607
ARM70120.1 KY926791_p65 hypothetical protein phrog_1312 unknown function unknown function 1 36174 36317
ARM70146.1 KY926791_p91 hypothetical protein phrog_9288 unknown function unknown function -1 56389 57096
ARM70068.1 KY926791_p13 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 10722 11141
ARM70115.1 KY926791_p60 hypothetical protein phrog_18974 unknown function unknown function 1 34539 34757
ARM70124.1 KY926791_p69 hypothetical protein phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 37643 38233
ARM70147.1 KY926791_p92 tail fibers protein phrog_14572 tail fiber protein tail -1 57334 58398
ARM70088.1 KY926791_p33 hypothetical protein singleton unknown function unknown function -1 22903 23091
ARM70073.1 KY926791_p18 hypothetical protein phrog_18016 unknown function unknown function -1 13102 13527
ARM70097.1 KY926791_p42 hypothetical protein phrog_3199 unknown function unknown function 1 26208 26453
ARM70107.1 KY926791_p52 hypothetical protein singleton unknown function unknown function 1 30337 30873
ARM70134.1 KY926791_p79 hypothetical protein phrog_18443 unknown function unknown function 1 46691 47446
ARM70111.1 KY926791_p56 hypothetical protein phrog_17339 protease other 1 33246 33524
ARM70099.1 KY926791_p44 hypothetical protein phrog_18014 unknown function unknown function 1 27491 28111
ARM70064.1 KY926791_p9 hypothetical protein phrog_569 tail length tape measure protein tail -1 8604 9032
ARM70071.1 KY926791_p16 hypothetical protein phrog_17875 unknown function unknown function -1 12023 12352