| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY926792 |
Definition |
Propionibacterium phage PacnesP1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29533 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
54.01 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASJ79900.1 | KY926792_p4 | hypothetical protein | phrog_1908 | unknown function | unknown function | 1 | 3328 | 3942 |
| ASJ79923.1 | KY926792_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15137 | 15277 |
| ASJ79920.1 | KY926792_p24 | amidase | phrog_670 | endolysin | lysis | -1 | 13261 | 14118 |
| ASJ79906.1 | KY926792_p10 | hypothetical protein | phrog_1288 | unknown function | unknown function | 1 | 6147 | 6713 |
| ASJ79916.1 | KY926792_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11591 | 12109 |
| ASJ79940.1 | KY926792_p44 | exonuclease | phrog_1897 | terminase small subunit | head and packaging | -1 | 29155 | 29484 |
| ASJ79899.1 | KY926792_p3 | hypothetical protein | phrog_919 | unknown function | unknown function | 1 | 2971 | 3282 |
| ASJ79902.1 | KY926792_p6 | hypothetical protein | phrog_1937 | unknown function | unknown function | 1 | 4189 | 4389 |
| ASJ79907.1 | KY926792_p11 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 6757 | 7620 |
| ASJ79909.1 | KY926792_p13 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 8120 | 8845 |
| ASJ79919.1 | KY926792_p23 | holin | phrog_443 | holin | lysis | -1 | 12850 | 13248 |
| ASJ79922.1 | KY926792_p26 | hypothetical protein | phrog_34778 | unknown function | unknown function | -1 | 14959 | 15129 |
| ASJ79898.1 | KY926792_p2 | hypothetical protein | phrog_919 | unknown function | unknown function | 1 | 2630 | 2938 |
| ASJ79935.1 | KY926792_p39 | capsid protein | phrog_10 | major head protein | head and packaging | -1 | 23940 | 24887 |
| ASJ79931.1 | KY926792_p35 | hypothetical protein | phrog_1892 | minor tail protein | tail | -1 | 22421 | 22792 |
| ASJ79926.1 | KY926792_p30 | minor tail protein | phrog_106 | minor tail protein | tail | -1 | 17288 | 18235 |
| ASJ79938.1 | KY926792_p42 | portal protein | phrog_104 | portal protein | head and packaging | -1 | 26317 | 27642 |
| ASJ79933.1 | KY926792_p37 | hypothetical protein | phrog_501 | head closure Hc1 | connector | -1 | 23085 | 23432 |
| ASJ79932.1 | KY926792_p36 | hypothetical protein | phrog_387 | neck protein | connector | -1 | 22789 | 23079 |
| ASJ79912.1 | KY926792_p16 | hypothetical protein | phrog_2548 | unknown function | unknown function | 1 | 9554 | 10009 |
| ASJ79928.1 | KY926792_p32 | tail assembly chaperone | phrog_3166 | unknown function | unknown function | -1 | 21025 | 21312 |
| ASJ79914.1 | KY926792_p18 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 10187 | 11233 |
| ASJ79921.1 | KY926792_p25 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | -1 | 14165 | 14962 |
| ASJ79934.1 | KY926792_p38 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | -1 | 23434 | 23913 |
| ASJ79917.1 | KY926792_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12134 | 12529 |
| ASJ79910.1 | KY926792_p14 | hypothetical protein | phrog_1881 | unknown function | unknown function | 1 | 8889 | 9455 |
| ASJ79936.1 | KY926792_p40 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | -1 | 24894 | 25445 |
| ASJ79903.1 | KY926792_p7 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 4495 | 4848 |
| ASJ79918.1 | KY926792_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12528 | 12764 |
| ASJ79911.1 | KY926792_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9424 | 9549 |
| ASJ79927.1 | KY926792_p31 | tape measure protein | phrog_58 | tail length tape measure protein | tail | -1 | 18252 | 21017 |
| ASJ79915.1 | KY926792_p19 | hypothetical protein | phrog_1340 | unknown function | unknown function | 1 | 11243 | 11563 |
| ASJ79929.1 | KY926792_p33 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | -1 | 21411 | 21662 |
| ASJ79905.1 | KY926792_p9 | hypothetical protein | phrog_1890 | unknown function | unknown function | 1 | 5786 | 6196 |
| ASJ79939.1 | KY926792_p43 | terminase | phrog_9 | terminase large subunit | head and packaging | -1 | 27639 | 29150 |
| ASJ79937.1 | KY926792_p41 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | -1 | 25555 | 26310 |
| ASJ79908.1 | KY926792_p12 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 7677 | 7976 |
| ASJ79901.1 | KY926792_p5 | hypothetical protein | phrog_1884 | unknown function | unknown function | 1 | 3965 | 4192 |
| ASJ79924.1 | KY926792_p28 | minor tail protein | phrog_1910 | lectin | other | -1 | 15278 | 16108 |
| ASJ79913.1 | KY926792_p17 | hypothetical protein | phrog_1923 | unknown function | unknown function | 1 | 9993 | 10190 |
| ASJ79904.1 | KY926792_p8 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4848 | 5789 |
| ASJ79925.1 | KY926792_p29 | minor tail protein | phrog_110 | minor tail protein | tail | -1 | 16123 | 17280 |
| ASJ79930.1 | KY926792_p34 | major tail subunit | phrog_117 | major tail protein | tail | -1 | 21735 | 22400 |
| ASJ79897.1 | KY926792_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16 | 387 |