Genomic map of Escherichia phage ST31 (KY962008)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY962008
Definition
Escherichia phage ST31, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus ST31.
DB of origin
NUCCORE
Length
39693
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
49.98
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARW56864.1 KY962008_p28 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17018 17428
ARW56880.1 KY962008_p44 hypothetical protein phrog_2193 unknown function unknown function 1 38055 38213
ARW56875.1 KY962008_p39 tail fiber protein singleton unknown function unknown function 1 32386 34851
ARW56845.1 KY962008_p9 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 5509 6579
ARW56851.1 KY962008_p15 hypothetical protein phrog_16385 unknown function unknown function 1 8833 9303
ARW56856.1 KY962008_p20 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 12119 14290
ARW56877.1 KY962008_p41 DNA packaging protein phrog_1351 terminase small subunit head and packaging 1 35184 35447
ARW56870.1 KY962008_p34 hypothetical protein phrog_457 tail protein tail 1 22157 24514
ARW56859.1 KY962008_p23 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 14783 15649
ARW56858.1 KY962008_p22 hypothetical protein phrog_1334 unknown function unknown function 1 14577 14786
ARW56881.1 KY962008_p45 hypothetical protein phrog_10124 unknown function unknown function 1 39347 39601
ARW56867.1 KY962008_p31 hypothetical protein phrog_267 major head protein head and packaging 1 20116 21159
ARW56849.1 KY962008_p13 ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7683 8381
ARW56876.1 KY962008_p40 holin phrog_920 holin lysis 1 34993 35187
ARW56846.1 KY962008_p10 hypothetical protein phrog_1777 unknown function unknown function 1 6695 6955
ARW56869.1 KY962008_p33 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 21920 22147
ARW56879.1 KY962008_p43 hypothetical protein phrog_38 terminase large subunit head and packaging 1 36028 37758
ARW56839.1 KY962008_p3 hypothetical protein phrog_2385 unknown function unknown function 1 980 1177
ARW56878.1 KY962008_p42 hypothetical protein phrog_1327 Rz-like spanin lysis 1 35549 35998
ARW56853.1 KY962008_p17 hypothetical protein phrog_1950 unknown function unknown function 1 9776 9991
ARW56842.1 KY962008_p6 hypothetical protein phrog_8082 unknown function unknown function 1 4230 4430
ARW56868.1 KY962008_p32 tail tube phrog_446 tail protein tail 1 21354 21920
ARW56872.1 KY962008_p36 hypothetical protein phrog_805 internal virion protein head and packaging 1 25046 25633
ARW56861.1 KY962008_p25 hypothetical protein phrog_1391 unknown function unknown function 1 16147 16371
ARW56866.1 KY962008_p30 capsid and scaffold protein phrog_1052 head assembly head and packaging 1 19105 19989
ARW56863.1 KY962008_p27 virion assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 16773 17021
ARW56854.1 KY962008_p18 primase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10148 11848
ARW56865.1 KY962008_p29 hypothetical protein phrog_449 head-tail adaptor connector 1 17421 18989
ARW56843.1 KY962008_p7 hypothetical protein phrog_8103 unknown function unknown function 1 4509 4979
ARW56837.1 KY962008_p1 hypothetical protein phrog_11084 unknown function unknown function 1 85 513
ARW56838.1 KY962008_p2 hypothetical protein phrog_5058 unknown function unknown function 1 507 656
ARW56871.1 KY962008_p35 internal virion protein phrog_308 internal virion protein head and packaging 1 24762 25079
ARW56874.1 KY962008_p38 internal core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 27932 32320
ARW56848.1 KY962008_p12 inhibitor of host bacterial RNA polymerase phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 7467 7625
ARW56844.1 KY962008_p8 hypothetical protein phrog_4383 unknown function unknown function 1 5075 5254
ARW56847.1 KY962008_p11 hypothetical protein phrog_4943 unknown function unknown function 1 6948 7388
ARW56857.1 KY962008_p21 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 14290 14580
ARW56852.1 KY962008_p16 N-acetyl-anhydromuranmyl-L-alanine amidase phrog_822 amidase lysis 1 9293 9751
ARW56840.1 KY962008_p4 hypothetical protein phrog_7066 unknown function unknown function 1 1177 1437
ARW56855.1 KY962008_p19 hypothetical protein phrog_13039 unknown function unknown function 1 11891 12055
ARW56873.1 KY962008_p37 core protein phrog_1339 internal virion protein head and packaging 1 25645 27927
ARW56862.1 KY962008_p26 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 16376 16780
ARW56850.1 KY962008_p14 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 8381 8833
ARW56860.1 KY962008_p24 hypothetical protein phrog_1447 unknown function unknown function 1 15860 16132
ARW56841.1 KY962008_p5 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 1536 4217