| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY962008 |
Definition |
Escherichia phage ST31, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus ST31. |
DB of origin |
NUCCORE |
Length |
39693 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
49.98 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARW56864.1 | KY962008_p28 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 17018 | 17428 |
| ARW56880.1 | KY962008_p44 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 38055 | 38213 |
| ARW56875.1 | KY962008_p39 | tail fiber protein | singleton | unknown function | unknown function | 1 | 32386 | 34851 |
| ARW56845.1 | KY962008_p9 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 5509 | 6579 |
| ARW56851.1 | KY962008_p15 | hypothetical protein | phrog_16385 | unknown function | unknown function | 1 | 8833 | 9303 |
| ARW56856.1 | KY962008_p20 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12119 | 14290 |
| ARW56877.1 | KY962008_p41 | DNA packaging protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35184 | 35447 |
| ARW56870.1 | KY962008_p34 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 22157 | 24514 |
| ARW56859.1 | KY962008_p23 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 14783 | 15649 |
| ARW56858.1 | KY962008_p22 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 14577 | 14786 |
| ARW56881.1 | KY962008_p45 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 39347 | 39601 |
| ARW56867.1 | KY962008_p31 | hypothetical protein | phrog_267 | major head protein | head and packaging | 1 | 20116 | 21159 |
| ARW56849.1 | KY962008_p13 | ssDNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7683 | 8381 |
| ARW56876.1 | KY962008_p40 | holin | phrog_920 | holin | lysis | 1 | 34993 | 35187 |
| ARW56846.1 | KY962008_p10 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 6695 | 6955 |
| ARW56869.1 | KY962008_p33 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 21920 | 22147 |
| ARW56879.1 | KY962008_p43 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 36028 | 37758 |
| ARW56839.1 | KY962008_p3 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 980 | 1177 |
| ARW56878.1 | KY962008_p42 | hypothetical protein | phrog_1327 | Rz-like spanin | lysis | 1 | 35549 | 35998 |
| ARW56853.1 | KY962008_p17 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 9776 | 9991 |
| ARW56842.1 | KY962008_p6 | hypothetical protein | phrog_8082 | unknown function | unknown function | 1 | 4230 | 4430 |
| ARW56868.1 | KY962008_p32 | tail tube | phrog_446 | tail protein | tail | 1 | 21354 | 21920 |
| ARW56872.1 | KY962008_p36 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 25046 | 25633 |
| ARW56861.1 | KY962008_p25 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 16147 | 16371 |
| ARW56866.1 | KY962008_p30 | capsid and scaffold protein | phrog_1052 | head assembly | head and packaging | 1 | 19105 | 19989 |
| ARW56863.1 | KY962008_p27 | virion assembly protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 16773 | 17021 |
| ARW56854.1 | KY962008_p18 | primase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10148 | 11848 |
| ARW56865.1 | KY962008_p29 | hypothetical protein | phrog_449 | head-tail adaptor | connector | 1 | 17421 | 18989 |
| ARW56843.1 | KY962008_p7 | hypothetical protein | phrog_8103 | unknown function | unknown function | 1 | 4509 | 4979 |
| ARW56837.1 | KY962008_p1 | hypothetical protein | phrog_11084 | unknown function | unknown function | 1 | 85 | 513 |
| ARW56838.1 | KY962008_p2 | hypothetical protein | phrog_5058 | unknown function | unknown function | 1 | 507 | 656 |
| ARW56871.1 | KY962008_p35 | internal virion protein | phrog_308 | internal virion protein | head and packaging | 1 | 24762 | 25079 |
| ARW56874.1 | KY962008_p38 | internal core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 27932 | 32320 |
| ARW56848.1 | KY962008_p12 | inhibitor of host bacterial RNA polymerase | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 7467 | 7625 |
| ARW56844.1 | KY962008_p8 | hypothetical protein | phrog_4383 | unknown function | unknown function | 1 | 5075 | 5254 |
| ARW56847.1 | KY962008_p11 | hypothetical protein | phrog_4943 | unknown function | unknown function | 1 | 6948 | 7388 |
| ARW56857.1 | KY962008_p21 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 14290 | 14580 |
| ARW56852.1 | KY962008_p16 | N-acetyl-anhydromuranmyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 9293 | 9751 |
| ARW56840.1 | KY962008_p4 | hypothetical protein | phrog_7066 | unknown function | unknown function | 1 | 1177 | 1437 |
| ARW56855.1 | KY962008_p19 | hypothetical protein | phrog_13039 | unknown function | unknown function | 1 | 11891 | 12055 |
| ARW56873.1 | KY962008_p37 | core protein | phrog_1339 | internal virion protein | head and packaging | 1 | 25645 | 27927 |
| ARW56862.1 | KY962008_p26 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 16376 | 16780 |
| ARW56850.1 | KY962008_p14 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8381 | 8833 |
| ARW56860.1 | KY962008_p24 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 15860 | 16132 |
| ARW56841.1 | KY962008_p5 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1536 | 4217 |