Genomic map of Mycobacterium phage Pippy (KY965064)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY965064
Definition
Mycobacterium phage Pippy, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
56663
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
61.5
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASJ79654.1 KY965064_p56 hypothetical protein phrog_2096 unknown function unknown function 1 38312 38797
ASJ79609.1 KY965064_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6797 7093
ASJ79618.1 KY965064_p19 minor tail protein phrog_416 minor tail protein tail 1 20253 21410
ASJ79645.1 KY965064_p46 hypothetical protein phrog_18246 unknown function unknown function 1 33946 34461
ASJ79672.1 KY965064_p77 hypothetical protein phrog_722 unknown function unknown function 1 47880 48068
ASJ79611.1 KY965064_p11 major tail protein phrog_476 major tail protein tail 1 7597 8406
ASJ79638.1 KY965064_p39 ReIB-like toxin phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 30401 30712
ASJ79664.1 KY965064_p67 hypothetical protein phrog_10510 unknown function unknown function 1 44354 44554
ASJ79665.1 KY965064_p68 hypothetical protein phrog_2704 unknown function unknown function 1 44551 44700
ASJ79614.1 KY965064_p15 minor tail protein phrog_106 minor tail protein tail 1 13002 14711
ASJ79678.1 KY965064_p84 hypothetical protein phrog_13993 unknown function unknown function 1 49382 49699
ASJ79655.1 KY965064_p57 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38794 39075
ASJ79610.1 KY965064_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7086 7487
ASJ79657.1 KY965064_p59 hypothetical protein phrog_2078 unknown function unknown function 1 39437 39589
ASJ79616.1 KY965064_p17 minor tail protein phrog_732 minor tail protein tail 1 16562 17392
ASJ79613.1 KY965064_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9474 13001
ASJ79701.1 KY965064_p86 hypothetical protein phrog_4126 unknown function unknown function 1 49872 49991
ASJ79702.1 KY965064_p79 hypothetical protein phrog_10032 unknown function unknown function 1 48511 48675
ASJ79669.1 KY965064_p74 hypothetical protein phrog_1943 unknown function unknown function 1 46980 47174
ASJ79604.1 KY965064_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3585 4340
ASJ79674.1 KY965064_p80 hypothetical protein phrog_2939 unknown function unknown function 1 48672 48884
ASJ79607.1 KY965064_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5868 6434
ASJ79634.1 KY965064_p35 hypothetical protein phrog_2437 unknown function unknown function -1 27264 27386
ASJ79661.1 KY965064_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41724 42086
ASJ79668.1 KY965064_p71 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 45549 46523
ASJ79642.1 KY965064_p43 immunity repressor phrog_20450 transcriptional repressor transcription regulation -1 32085 32648
ASJ79603.1 KY965064_p3 portal protein phrog_104 portal protein head and packaging 1 2240 3598
ASJ79652.1 KY965064_p54 hypothetical protein phrog_658 unknown function unknown function 1 37474 37821
ASJ79644.1 KY965064_p45 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 33164 33943
ASJ79690.1 KY965064_p98 hypothetical protein phrog_2057 unknown function unknown function 1 53463 53624
ASJ79662.1 KY965064_p65 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 42083 43390
ASJ79602.1 KY965064_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 572 2209
ASJ79697.1 KY965064_p101 serine/threonine kinase phrog_1693 unknown function unknown function 1 55369 55575
ASJ79671.1 KY965064_p76 hypothetical protein phrog_647 unknown function unknown function 1 47591 47887
ASJ79675.1 KY965064_p81 hypothetical protein phrog_1901 unknown function unknown function 1 48881 49072
ASJ79648.1 KY965064_p50 hypothetical protein phrog_1840 excisionase integration and excision 1 36021 36290
ASJ79635.1 KY965064_p36 transposase phrog_506 transposase integration and excision -1 27394 28614
ASJ79659.1 KY965064_p61 hypothetical protein phrog_5168 unknown function unknown function 1 39819 40283
ASJ79683.1 KY965064_p91 hypothetical protein phrog_15959 unknown function unknown function 1 51665 51913
ASJ79677.1 KY965064_p83 hypothetical protein phrog_1545 unknown function unknown function 1 49248 49385
ASJ79605.1 KY965064_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4366 5016
ASJ79641.1 KY965064_p42 peptidase phrog_87 metallo-protease other -1 31458 31901
ASJ79650.1 KY965064_p52 hypothetical protein phrog_1797 unknown function unknown function 1 36472 37119
ASJ79670.1 KY965064_p75 hypothetical protein phrog_1546 unknown function unknown function 1 47171 47551
ASJ79691.1 KY965064_p100 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53930 55366
ASJ79627.1 KY965064_p28 hypothetical protein phrog_2004 unknown function unknown function 1 25300 25533
ASJ79637.1 KY965064_p38 integrase phrog_1 integrase integration and excision 1 29161 30279
ASJ79633.1 KY965064_p34 hypothetical protein phrog_3693 unknown function unknown function -1 27142 27282
ASJ79695.1 KY965064_p62 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40280 40750
ASJ79628.1 KY965064_p29 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 25520 26341
ASJ79667.1 KY965064_p70 G-I-Y-Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 44947 45549
ASJ79632.1 KY965064_p33 hypothetical protein phrog_7480 unknown function unknown function -1 26939 27145
ASJ79631.1 KY965064_p32 hypothetical protein phrog_10622 unknown function unknown function -1 26800 26946
ASJ79643.1 KY965064_p44 hypothetical protein phrog_19814 unknown function unknown function 1 32748 33110
ASJ79646.1 KY965064_p48 hypothetical protein phrog_4652 unknown function unknown function 1 34698 35444
ASJ79698.1 KY965064_p73 hypothetical protein phrog_2730 unknown function unknown function 1 46780 46983
ASJ79682.1 KY965064_p90 hypothetical protein phrog_1467 unknown function unknown function 1 50953 51624
ASJ79636.1 KY965064_p37 hypothetical protein singleton unknown function unknown function -1 28791 28907
ASJ79621.1 KY965064_p22 hypothetical protein phrog_1172 unknown function unknown function 1 22026 22202
ASJ79684.1 KY965064_p92 hypothetical protein phrog_13974 membrane protein moron, auxiliary metabolic gene and host takeover 1 51910 52212
ASJ79630.1 KY965064_p31 hypothetical protein phrog_1839 unknown function unknown function 1 26639 26731
ASJ79608.1 KY965064_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6431 6760
ASJ79601.1 KY965064_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
ASJ79658.1 KY965064_p60 hypothetical protein phrog_1834 unknown function unknown function 1 39589 39822
ASJ79623.1 KY965064_p24 lysin A phrog_700 endolysin lysis 1 22504 23664
ASJ79699.1 KY965064_p47 hypothetical protein singleton unknown function unknown function 1 34458 34646
ASJ79624.1 KY965064_p25 lysin B phrog_102 endolysin lysis 1 23661 24662
ASJ79620.1 KY965064_p21 hypothetical protein phrog_240 head protein head and packaging 1 21646 22026
ASJ79626.1 KY965064_p27 hypothetical protein phrog_404 minor tail protein tail 1 24902 25276
ASJ79681.1 KY965064_p89 G-I-Y-Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 50417 50956
ASJ79673.1 KY965064_p78 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 48138 48509
ASJ79640.1 KY965064_p41 hypothetical protein phrog_1948 unknown function unknown function -1 30968 31420
ASJ79686.1 KY965064_p94 hypothetical protein phrog_419 unknown function unknown function 1 52340 52621
ASJ79685.1 KY965064_p93 hypothetical protein phrog_14508 unknown function unknown function 1 52194 52331
ASJ79617.1 KY965064_p18 minor tail protein phrog_346 minor tail protein tail 1 17389 20253
ASJ79679.1 KY965064_p85 hypothetical protein phrog_8093 unknown function unknown function 1 49696 49875
ASJ79639.1 KY965064_p40 ReIE-like antitoxin phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 30709 30957
ASJ79625.1 KY965064_p26 holin phrog_443 holin lysis 1 24672 24905
ASJ79676.1 KY965064_p82 hypothetical protein phrog_1091 unknown function unknown function 1 49069 49248
ASJ79656.1 KY965064_p58 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 39072 39437
ASJ79651.1 KY965064_p53 hypothetical protein phrog_1849 unknown function unknown function 1 37199 37477
ASJ79694.1 KY965064_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8520 9071
ASJ79703.1 KY965064_p103 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56195 56521
ASJ79649.1 KY965064_p51 hypothetical protein phrog_1816 unknown function unknown function 1 36287 36475
ASJ79615.1 KY965064_p16 minor tail protein phrog_110 minor tail protein tail 1 14798 16507
ASJ79612.1 KY965064_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8520 9456
ASJ79700.1 KY965064_p72 hypothetical protein phrog_2080 unknown function unknown function 1 46520 46780
ASJ79687.1 KY965064_p95 hypothetical protein phrog_1694 unknown function unknown function 1 52621 52821
ASJ79622.1 KY965064_p23 hypothetical protein phrog_747 unknown function unknown function 1 22268 22507
ASJ79663.1 KY965064_p66 hypothetical protein phrog_67 DNA methyltransferase other 1 43387 44337
ASJ79606.1 KY965064_p6 major capsid protein phrog_267 major head protein head and packaging 1 5035 5856
ASJ79696.1 KY965064_p99 hypothetical protein phrog_28092 unknown function unknown function 1 53621 53923
ASJ79688.1 KY965064_p96 hypothetical protein phrog_1186 unknown function unknown function 1 52818 53231
ASJ79647.1 KY965064_p49 hypothetical protein phrog_15946 unknown function unknown function 1 35459 36175
ASJ79680.1 KY965064_p87 hypothetical protein phrog_2278 unknown function unknown function 1 49988 50320
ASJ79689.1 KY965064_p97 hypothetical protein phrog_1385 unknown function unknown function 1 53228 53470
ASJ79629.1 KY965064_p30 hypothetical protein phrog_1791 unknown function unknown function 1 26425 26646
ASJ79666.1 KY965064_p69 hypothetical protein phrog_2070 unknown function unknown function 1 44697 44849
ASJ79693.1 KY965064_p88 hypothetical protein phrog_6194 unknown function unknown function 1 50317 50394
ASJ79619.1 KY965064_p20 hypothetical protein phrog_6030 unknown function unknown function 1 21407 21646
ASJ79653.1 KY965064_p55 WhiB family transcription factor phrog_1333 unknown function unknown function 1 37821 38315
ASJ79692.1 KY965064_p102 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 55572 56195
ASJ79660.1 KY965064_p63 DNA recombinase phrog_1366 unknown function unknown function 1 40747 41727