| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY965064 |
Definition |
Mycobacterium phage Pippy, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
56663 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
61.5 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASJ79654.1 | KY965064_p56 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 38312 | 38797 |
| ASJ79609.1 | KY965064_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6797 | 7093 |
| ASJ79618.1 | KY965064_p19 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 20253 | 21410 |
| ASJ79645.1 | KY965064_p46 | hypothetical protein | phrog_18246 | unknown function | unknown function | 1 | 33946 | 34461 |
| ASJ79672.1 | KY965064_p77 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 47880 | 48068 |
| ASJ79611.1 | KY965064_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7597 | 8406 |
| ASJ79638.1 | KY965064_p39 | ReIB-like toxin | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 30401 | 30712 |
| ASJ79664.1 | KY965064_p67 | hypothetical protein | phrog_10510 | unknown function | unknown function | 1 | 44354 | 44554 |
| ASJ79665.1 | KY965064_p68 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 44551 | 44700 |
| ASJ79614.1 | KY965064_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13002 | 14711 |
| ASJ79678.1 | KY965064_p84 | hypothetical protein | phrog_13993 | unknown function | unknown function | 1 | 49382 | 49699 |
| ASJ79655.1 | KY965064_p57 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38794 | 39075 |
| ASJ79610.1 | KY965064_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7086 | 7487 |
| ASJ79657.1 | KY965064_p59 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 39437 | 39589 |
| ASJ79616.1 | KY965064_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16562 | 17392 |
| ASJ79613.1 | KY965064_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9474 | 13001 |
| ASJ79701.1 | KY965064_p86 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 49872 | 49991 |
| ASJ79702.1 | KY965064_p79 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 48511 | 48675 |
| ASJ79669.1 | KY965064_p74 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46980 | 47174 |
| ASJ79604.1 | KY965064_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3585 | 4340 |
| ASJ79674.1 | KY965064_p80 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 48672 | 48884 |
| ASJ79607.1 | KY965064_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5868 | 6434 |
| ASJ79634.1 | KY965064_p35 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 27264 | 27386 |
| ASJ79661.1 | KY965064_p64 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41724 | 42086 |
| ASJ79668.1 | KY965064_p71 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45549 | 46523 |
| ASJ79642.1 | KY965064_p43 | immunity repressor | phrog_20450 | transcriptional repressor | transcription regulation | -1 | 32085 | 32648 |
| ASJ79603.1 | KY965064_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2240 | 3598 |
| ASJ79652.1 | KY965064_p54 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37474 | 37821 |
| ASJ79644.1 | KY965064_p45 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 33164 | 33943 |
| ASJ79690.1 | KY965064_p98 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 53463 | 53624 |
| ASJ79662.1 | KY965064_p65 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 42083 | 43390 |
| ASJ79602.1 | KY965064_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 572 | 2209 |
| ASJ79697.1 | KY965064_p101 | serine/threonine kinase | phrog_1693 | unknown function | unknown function | 1 | 55369 | 55575 |
| ASJ79671.1 | KY965064_p76 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 47591 | 47887 |
| ASJ79675.1 | KY965064_p81 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 48881 | 49072 |
| ASJ79648.1 | KY965064_p50 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 36021 | 36290 |
| ASJ79635.1 | KY965064_p36 | transposase | phrog_506 | transposase | integration and excision | -1 | 27394 | 28614 |
| ASJ79659.1 | KY965064_p61 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 39819 | 40283 |
| ASJ79683.1 | KY965064_p91 | hypothetical protein | phrog_15959 | unknown function | unknown function | 1 | 51665 | 51913 |
| ASJ79677.1 | KY965064_p83 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 49248 | 49385 |
| ASJ79605.1 | KY965064_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4366 | 5016 |
| ASJ79641.1 | KY965064_p42 | peptidase | phrog_87 | metallo-protease | other | -1 | 31458 | 31901 |
| ASJ79650.1 | KY965064_p52 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 36472 | 37119 |
| ASJ79670.1 | KY965064_p75 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 47171 | 47551 |
| ASJ79691.1 | KY965064_p100 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53930 | 55366 |
| ASJ79627.1 | KY965064_p28 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 25300 | 25533 |
| ASJ79637.1 | KY965064_p38 | integrase | phrog_1 | integrase | integration and excision | 1 | 29161 | 30279 |
| ASJ79633.1 | KY965064_p34 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 27142 | 27282 |
| ASJ79695.1 | KY965064_p62 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40280 | 40750 |
| ASJ79628.1 | KY965064_p29 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 25520 | 26341 |
| ASJ79667.1 | KY965064_p70 | G-I-Y-Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44947 | 45549 |
| ASJ79632.1 | KY965064_p33 | hypothetical protein | phrog_7480 | unknown function | unknown function | -1 | 26939 | 27145 |
| ASJ79631.1 | KY965064_p32 | hypothetical protein | phrog_10622 | unknown function | unknown function | -1 | 26800 | 26946 |
| ASJ79643.1 | KY965064_p44 | hypothetical protein | phrog_19814 | unknown function | unknown function | 1 | 32748 | 33110 |
| ASJ79646.1 | KY965064_p48 | hypothetical protein | phrog_4652 | unknown function | unknown function | 1 | 34698 | 35444 |
| ASJ79698.1 | KY965064_p73 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 46780 | 46983 |
| ASJ79682.1 | KY965064_p90 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 50953 | 51624 |
| ASJ79636.1 | KY965064_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28791 | 28907 |
| ASJ79621.1 | KY965064_p22 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22026 | 22202 |
| ASJ79684.1 | KY965064_p92 | hypothetical protein | phrog_13974 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 51910 | 52212 |
| ASJ79630.1 | KY965064_p31 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 26639 | 26731 |
| ASJ79608.1 | KY965064_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6431 | 6760 |
| ASJ79601.1 | KY965064_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| ASJ79658.1 | KY965064_p60 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39589 | 39822 |
| ASJ79623.1 | KY965064_p24 | lysin A | phrog_700 | endolysin | lysis | 1 | 22504 | 23664 |
| ASJ79699.1 | KY965064_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34458 | 34646 |
| ASJ79624.1 | KY965064_p25 | lysin B | phrog_102 | endolysin | lysis | 1 | 23661 | 24662 |
| ASJ79620.1 | KY965064_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21646 | 22026 |
| ASJ79626.1 | KY965064_p27 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 24902 | 25276 |
| ASJ79681.1 | KY965064_p89 | G-I-Y-Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 50417 | 50956 |
| ASJ79673.1 | KY965064_p78 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 48138 | 48509 |
| ASJ79640.1 | KY965064_p41 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 30968 | 31420 |
| ASJ79686.1 | KY965064_p94 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 52340 | 52621 |
| ASJ79685.1 | KY965064_p93 | hypothetical protein | phrog_14508 | unknown function | unknown function | 1 | 52194 | 52331 |
| ASJ79617.1 | KY965064_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17389 | 20253 |
| ASJ79679.1 | KY965064_p85 | hypothetical protein | phrog_8093 | unknown function | unknown function | 1 | 49696 | 49875 |
| ASJ79639.1 | KY965064_p40 | ReIE-like antitoxin | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 30709 | 30957 |
| ASJ79625.1 | KY965064_p26 | holin | phrog_443 | holin | lysis | 1 | 24672 | 24905 |
| ASJ79676.1 | KY965064_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 49069 | 49248 |
| ASJ79656.1 | KY965064_p58 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39072 | 39437 |
| ASJ79651.1 | KY965064_p53 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 37199 | 37477 |
| ASJ79694.1 | KY965064_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8520 | 9071 |
| ASJ79703.1 | KY965064_p103 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56195 | 56521 |
| ASJ79649.1 | KY965064_p51 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 36287 | 36475 |
| ASJ79615.1 | KY965064_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14798 | 16507 |
| ASJ79612.1 | KY965064_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8520 | 9456 |
| ASJ79700.1 | KY965064_p72 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46520 | 46780 |
| ASJ79687.1 | KY965064_p95 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 52621 | 52821 |
| ASJ79622.1 | KY965064_p23 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 22268 | 22507 |
| ASJ79663.1 | KY965064_p66 | hypothetical protein | phrog_67 | DNA methyltransferase | other | 1 | 43387 | 44337 |
| ASJ79606.1 | KY965064_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5035 | 5856 |
| ASJ79696.1 | KY965064_p99 | hypothetical protein | phrog_28092 | unknown function | unknown function | 1 | 53621 | 53923 |
| ASJ79688.1 | KY965064_p96 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52818 | 53231 |
| ASJ79647.1 | KY965064_p49 | hypothetical protein | phrog_15946 | unknown function | unknown function | 1 | 35459 | 36175 |
| ASJ79680.1 | KY965064_p87 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 49988 | 50320 |
| ASJ79689.1 | KY965064_p97 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 53228 | 53470 |
| ASJ79629.1 | KY965064_p30 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 26425 | 26646 |
| ASJ79666.1 | KY965064_p69 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44697 | 44849 |
| ASJ79693.1 | KY965064_p88 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 50317 | 50394 |
| ASJ79619.1 | KY965064_p20 | hypothetical protein | phrog_6030 | unknown function | unknown function | 1 | 21407 | 21646 |
| ASJ79653.1 | KY965064_p55 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 37821 | 38315 |
| ASJ79692.1 | KY965064_p102 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55572 | 56195 |
| ASJ79660.1 | KY965064_p63 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 40747 | 41727 |