Genomic map of Escherichia phage vB_EcoS_SH2 (KY985004)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY985004
Definition
Escherichia phage vB_EcoS_SH2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tunavirinae; Tunavirus; Escherichia virus SH2.
DB of origin
NUCCORE
Length
49088
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
45.47
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARW57199.1 KY985004_p12 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 4411 4698
ARW57254.1 KY985004_p67 hypothetical protein phrog_1804 Rz-like spanin lysis 1 42786 43187
ARW57196.1 KY985004_p9 hypothetical protein phrog_7116 unknown function unknown function 1 3379 3885
ARW57193.1 KY985004_p6 hypothetical protein phrog_8628 unknown function unknown function 1 2373 2546
ARW57195.1 KY985004_p8 hypothetical protein phrog_9595 unknown function unknown function 1 2819 3307
ARW57240.1 KY985004_p53 tail fibers protein phrog_1980 tail fiber protein tail -1 33076 34632
ARW57208.1 KY985004_p21 hypothetical protein phrog_4927 unknown function unknown function 1 7913 8116
ARW57232.1 KY985004_p45 tail assembly protein phrog_32 tail assembly protein tail 1 24888 25487
ARW57217.1 KY985004_p30 hypothetical protein phrog_1989 unknown function unknown function 1 14269 14745
ARW57218.1 KY985004_p31 hypothetical protein phrog_1989 unknown function unknown function 1 14808 15575
ARW57252.1 KY985004_p65 holin singleton unknown function unknown function 1 42134 42298
ARW57198.1 KY985004_p11 hypothetical protein phrog_24939 unknown function unknown function 1 4115 4414
ARW57227.1 KY985004_p40 hypothetical protein phrog_680 tail length tape measure protein tail 1 19761 20030
ARW57266.1 KY985004_p79 hypothetical protein phrog_757 DNA methyltransferase other -1 47919 48650
ARW57250.1 KY985004_p63 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 40573 41724
ARW57224.1 KY985004_p37 hypothetical protein phrog_179 tail terminator connector 1 18214 18612
ARW57247.1 KY985004_p60 hypothetical protein phrog_2180 unknown function unknown function 1 39803 40012
ARW57262.1 KY985004_p75 hypothetical protein phrog_6503 unknown function unknown function -1 46858 47058
ARW57225.1 KY985004_p38 tail fibers protein phrog_584 major tail protein tail 1 18614 19282
ARW57191.1 KY985004_p4 hypothetical protein phrog_11449 unknown function unknown function 1 1806 2036
ARW57190.1 KY985004_p3 hypothetical protein phrog_12951 unknown function unknown function 1 1257 1727
ARW57209.1 KY985004_p22 hypothetical protein phrog_6666 unknown function unknown function 1 8281 8442
ARW57239.1 KY985004_p52 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 32634 33047
ARW57194.1 KY985004_p7 hypothetical protein phrog_11551 unknown function unknown function 1 2556 2747
ARW57267.1 KY985004_p80 hypothetical protein phrog_16851 unknown function unknown function -1 48647 48859
ARW57260.1 KY985004_p73 hypothetical protein phrog_3955 unknown function unknown function -1 46381 46524
ARW57222.1 KY985004_p35 hypothetical protein phrog_161 head closure Hc1 connector 1 17417 17788
ARW57214.1 KY985004_p27 portal protein phrog_146 portal protein head and packaging 1 11108 12391
ARW57264.1 KY985004_p77 hypothetical protein phrog_3623 unknown function unknown function -1 47498 47683
ARW57265.1 KY985004_p78 hypothetical protein phrog_7717 unknown function unknown function -1 47699 47884
ARW57235.1 KY985004_p48 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 29335 30024
ARW57249.1 KY985004_p62 hypothetical protein phrog_38834 unknown function unknown function 1 40330 40494
ARW57200.1 KY985004_p13 hypothetical protein phrog_10580 unknown function unknown function 1 4695 5498
ARW57255.1 KY985004_p68 hypothetical protein phrog_2794 unknown function unknown function -1 43309 43716
ARW57256.1 KY985004_p69 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 43721 45289
ARW57253.1 KY985004_p66 lysin phrog_7 endolysin lysis 1 42298 42786
ARW57229.1 KY985004_p42 tail fibers protein phrog_14 minor tail protein tail 1 22945 23298
ARW57188.1 KY985004_p1 hypothetical protein phrog_11083 unknown function unknown function 1 454 969
ARW57243.1 KY985004_p56 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 36276 38294
ARW57263.1 KY985004_p76 hypothetical protein phrog_11577 unknown function unknown function -1 47051 47422
ARW57219.1 KY985004_p32 hypothetical protein phrog_264 major head protein head and packaging 1 15667 16626
ARW57202.1 KY985004_p15 3'-phosphatase, 5'-polynucleotide kinase phrog_415 polynucleotide kinase other 1 5769 6380
ARW57220.1 KY985004_p33 hypothetical protein phrog_2716 unknown function unknown function 1 16676 16963
ARW57237.1 KY985004_p50 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 30802 31866
ARW57251.1 KY985004_p64 hypothetical protein phrog_4788 unknown function unknown function 1 41788 41964
ARW57230.1 KY985004_p43 minor tail protein phrog_18 minor tail protein tail 1 23378 24160
ARW57213.1 KY985004_p26 terminase large subunit phrog_38 terminase large subunit head and packaging 1 9485 11053
ARW57212.1 KY985004_p25 terminase small subunit phrog_606 terminase small subunit head and packaging 1 8922 9446
ARW57221.1 KY985004_p34 hypothetical protein phrog_302 virion structural protein head and packaging 1 17007 17417
ARW57197.1 KY985004_p10 hypothetical protein phrog_5579 unknown function unknown function 1 3885 4034
ARW57242.1 KY985004_p55 hypothetical protein phrog_2856 transcriptional regulator transcription regulation -1 35730 36182
ARW57210.1 KY985004_p23 hypothetical protein phrog_2919 unknown function unknown function 1 8423 8608
ARW57233.1 KY985004_p46 tail fiber protein phrog_31 central tail fiber J tail 1 25565 28984
ARW57192.1 KY985004_p5 hypothetical protein phrog_6080 unknown function unknown function 1 2042 2269
ARW57258.1 KY985004_p71 hypothetical protein phrog_9085 unknown function unknown function -1 45863 46075
ARW57201.1 KY985004_p14 hypothetical protein phrog_11330 unknown function unknown function 1 5483 5701
ARW57234.1 KY985004_p47 hypothetical protein phrog_557 outer membrane protein other 1 29030 29335
ARW57248.1 KY985004_p61 hypothetical protein phrog_2817 unknown function unknown function 1 39990 40262
ARW57216.1 KY985004_p29 capsid and scaffold protein phrog_530 head maturation protease head and packaging 1 13145 14257
ARW57189.1 KY985004_p2 hypothetical protein phrog_7421 unknown function unknown function 1 1060 1254
ARW57223.1 KY985004_p36 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 17781 18224
ARW57244.1 KY985004_p57 hypothetical protein phrog_824 unknown function unknown function 1 38291 38707
ARW57205.1 KY985004_p18 hypothetical protein phrog_10456 unknown function unknown function 1 7134 7343
ARW57246.1 KY985004_p59 hypothetical protein phrog_2676 unknown function unknown function 1 39488 39736
ARW57215.1 KY985004_p28 minor capsid protein phrog_324 head morphogenesis head and packaging 1 12381 13142
ARW57241.1 KY985004_p54 DNA primase/helicase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 34733 35668
ARW57203.1 KY985004_p16 hypothetical protein singleton unknown function unknown function 1 6359 6487
ARW57238.1 KY985004_p51 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31941 32588
ARW57259.1 KY985004_p72 hypothetical protein phrog_4344 unknown function unknown function -1 46079 46303
ARW57228.1 KY985004_p41 tail length tape-measure protein 1 phrog_24 tail length tape measure protein tail 1 20069 22942
ARW57207.1 KY985004_p20 hypothetical protein phrog_303 unknown function unknown function 1 7683 7913
ARW57261.1 KY985004_p74 hypothetical protein phrog_10555 unknown function unknown function -1 46521 46841
ARW57231.1 KY985004_p44 tail assembly protein phrog_30 minor tail protein tail 1 24157 24891
ARW57206.1 KY985004_p19 hypothetical protein phrog_9709 unknown function unknown function 1 7340 7699
ARW57211.1 KY985004_p24 hypothetical protein phrog_5976 unknown function unknown function 1 8610 8837
ARW57226.1 KY985004_p39 hypothetical protein phrog_569 tail length tape measure protein tail 1 19396 19713
ARW57236.1 KY985004_p49 super-infection exclusion protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 30046 30273
ARW57257.1 KY985004_p70 hypothetical protein phrog_2684 unknown function unknown function -1 45366 45782
ARW57204.1 KY985004_p17 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 6489 7061
ARW57245.1 KY985004_p58 DNA adenine methyltransferase phrog_111 DNA methyltransferase other 1 38775 39488