Genomic map of Enterobacter phage phiEM4 (LC373201)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LC373201
Definition
Enterobacter phage phiEM4 DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Agtrevirus; unclassified Agtrevirus.
DB of origin
NUCCORE
Length
160766
Host Name
Enterobacter asburiae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
106
%GC
50.7
Number of singletons
13
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BBD52214.1 LC373201_p34 hypothetical protein phrog_6872 unknown function unknown function -1 19388 19705
BBD52184.1 LC373201_p4 RecA recombination protein phrog_97 UvsX-like recombinase other 1 1460 2551
BBD52216.1 LC373201_p36 hypothetical protein singleton unknown function unknown function -1 20363 20728
BBD52224.1 LC373201_p44 hypothetical protein phrog_652 unknown function unknown function -1 29725 30201
BBD52189.1 LC373201_p9 hypothetical protein phrog_2319 unknown function unknown function 1 5148 6344
BBD52225.1 LC373201_p45 RIIA protein phrog_3661 RIIA lysis inhibitor lysis -1 34913 37669
BBD52269.1 LC373201_p89 RegB protein phrog_600 unknown function unknown function 1 132397 133011
BBD52266.1 LC373201_p86 Gp55 T4-like sigma factor involved in late transcription phrog_234 late sigma transcription factor transcription regulation 1 127307 128098
BBD52193.1 LC373201_p13 ABC-type phosphate transport system, permease component phrog_1203 unknown function unknown function 1 7278 7886
BBD52245.1 LC373201_p65 Gp23 major head protein phrog_138 major head protein head and packaging 1 93211 94533
BBD52191.1 LC373201_p11 hypothetical protein phrog_4789 unknown function unknown function 1 6657 6869
BBD52192.1 LC373201_p12 hypothetical protein phrog_8918 unknown function unknown function 1 6871 7218
BBD52281.1 LC373201_p101 baseplate tail tube initiator gp54 singleton unknown function unknown function -1 155169 155501
BBD52228.1 LC373201_p48 hypothetical protein phrog_3911 unknown function unknown function -1 45627 45932
BBD52183.1 LC373201_p3 hypothetical protein phrog_3839 unknown function unknown function 1 933 1475
BBD52282.1 LC373201_p102 DNA end protector protein gp2 singleton unknown function unknown function 1 156165 156542
BBD52286.1 LC373201_p106 thymidylate synthase singleton unknown function unknown function 1 160354 160515
BBD52271.1 LC373201_p91 hypothetical protein phrog_4460 unknown function unknown function 1 139933 140139
BBD52226.1 LC373201_p46 uncharacterized protein orf00256 phrog_4130 unknown function unknown function -1 39147 39521
BBD52258.1 LC373201_p78 hypothetical protein phrog_8656 unknown function unknown function 1 115311 115481
BBD52260.1 LC373201_p80 pyimidine dimer DNA glycosylase DenV phrog_1183 endonuclease V N-glycosylase UV repair enzyme DNA, RNA and nucleotide metabolism 1 118742 119197
BBD52275.1 LC373201_p95 NrdB ribonucleotide reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 145604 146707
BBD52185.1 LC373201_p5 hypothetical protein phrog_3998 unknown function unknown function 1 2529 2858
BBD52261.1 LC373201_p81 hypothetical protein phrog_3828 unknown function unknown function 1 121655 122581
BBD52222.1 LC373201_p42 DNA topoisomerase/gyrase gp52 phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism -1 25851 27182
BBD52277.1 LC373201_p97 baseplate hub subunit gp26 phrog_150 baseplate hub tail -1 150479 151183
BBD52259.1 LC373201_p79 vWa containing protein phrog_2426 unknown function unknown function 1 115474 117705
BBD52242.1 LC373201_p62 portal protein phrog_213 portal protein head and packaging 1 89309 91000
BBD52203.1 LC373201_p23 tail length tape measure protein singleton unknown function unknown function -1 11993 13069
BBD52210.1 LC373201_p30 hypothetical protein phrog_3707 membrane-flanked domain moron, auxiliary metabolic gene and host takeover -1 17750 18157
BBD52211.1 LC373201_p31 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 18168 18674
BBD52256.1 LC373201_p76 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 112754 113608
BBD52205.1 LC373201_p25 baseplate hub subunit gp27 phrog_350 tail protein tail -1 13955 15343
BBD52250.1 LC373201_p70 exonuclease phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 101029 101775
BBD52285.1 LC373201_p105 thymidylate synthase singleton unknown function unknown function 1 160029 160370
BBD52239.1 LC373201_p59 Gp17 terminase DNA packaging enzyme large subunit phrog_2 terminase large subunit head and packaging 1 84471 86681
BBD52194.1 LC373201_p14 hypothetical membrane protein phrog_11433 membrane protein moron, auxiliary metabolic gene and host takeover 1 7889 8470
BBD52196.1 LC373201_p16 hypothetical protein singleton unknown function unknown function 1 8652 8831
BBD52244.1 LC373201_p64 Gp22 prohead core protein phrog_237 head scaffolding protein head and packaging 1 92244 93119
BBD52251.1 LC373201_p71 RNA-DNA and DNA-DNA helicase UvsW phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 101953 103311
BBD52198.1 LC373201_p18 hypothetical protein phrog_14593 unknown function unknown function 1 10311 10535
BBD52238.1 LC373201_p58 terminase small subunit gp16 phrog_735 terminase small subunit head and packaging 1 83795 84490
BBD52200.1 LC373201_p20 hypothetical membrane protein phrog_12914 membrane protein moron, auxiliary metabolic gene and host takeover 1 10775 11032
BBD52273.1 LC373201_p93 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other 1 142326 143168
BBD52187.1 LC373201_p7 hypothetical protein phrog_3733 unknown function unknown function 1 4355 4690
BBD52197.1 LC373201_p17 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 8887 10314
BBD52201.1 LC373201_p21 hypothetical protein singleton unknown function unknown function 1 11073 11339
BBD52221.1 LC373201_p41 uncharacterized protein orf00021 phrog_839 unknown function unknown function -1 24792 25202
BBD52241.1 LC373201_p61 tail tube protein gp19 phrog_45 tail tube tail 1 88780 89241
BBD52227.1 LC373201_p47 hypothetical membrane protein phrog_7943 membrane protein moron, auxiliary metabolic gene and host takeover -1 43977 44162
BBD52246.1 LC373201_p66 hypothetical protein phrog_1578 unknown function unknown function 1 96924 97160
BBD52207.1 LC373201_p27 tail tube associated baseplate protein gp48 singleton unknown function unknown function -1 15906 16217
BBD52253.1 LC373201_p73 DNA polymerase accessory protein gp44 phrog_168 clamp loader of DNA polymerase DNA, RNA and nucleotide metabolism 1 104772 105761
BBD52272.1 LC373201_p92 endolysin phrog_1224 endolysin head and packaging 1 141427 142221
BBD52229.1 LC373201_p49 5'(3') deoxyribonucleotidase phrog_420 unknown function unknown function -1 45942 46520
BBD52268.1 LC373201_p88 recombination endonuclease subunit gp46 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 129203 131539
BBD52230.1 LC373201_p50 hypothetical protein phrog_3748 unknown function unknown function -1 46714 47055
BBD52248.1 LC373201_p68 tail completion & sheath stabilizer protein gp3 phrog_45 tail tube tail 1 100034 100534
BBD52264.1 LC373201_p84 ATP-dependent DNA helicase phrog_2488 DNA helicase DNA, RNA and nucleotide metabolism 1 124471 125958
BBD52267.1 LC373201_p87 endonuclease gp47 phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 128085 129200
BBD52215.1 LC373201_p35 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase phrog_1238 phosphoheptose isomerase moron, auxiliary metabolic gene and host takeover -1 19702 20115
BBD52257.1 LC373201_p77 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 113605 115269
BBD52247.1 LC373201_p67 hypothetical protein phrog_4663 unknown function unknown function 1 97630 97950
BBD52237.1 LC373201_p57 tail sheath stabilizer gp15 phrog_227 tail sheath stabilizer tail 1 83097 83792
BBD52249.1 LC373201_p69 DNA repair/recombination protein UvsY phrog_231 UvsY-like recombination mediator DNA, RNA and nucleotide metabolism 1 100577 101029
BBD52208.1 LC373201_p28 Gp4 head completion protein phrog_218 head closure connector 1 16924 17538
BBD52280.1 LC373201_p100 ssDNA binding protein gp32 phrog_224 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 154096 155142
BBD52234.1 LC373201_p54 baseplate wedge subunit gp6 phrog_219 baseplate wedge subunit tail 1 61538 63316
BBD52236.1 LC373201_p56 neck protein gp14 phrog_679 head closure Hc2 connector 1 82444 83094
BBD52190.1 LC373201_p10 hypothetical protein phrog_5428 unknown function unknown function 1 6457 6657
BBD52283.1 LC373201_p103 Gp2 DNA end protector protein singleton unknown function unknown function 1 156473 156865
BBD52195.1 LC373201_p15 hypothetical protein phrog_25181 membrane protein moron, auxiliary metabolic gene and host takeover 1 8470 8655
BBD52274.1 LC373201_p94 ribonucleoside-diphosphate reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 143254 145533
BBD52270.1 LC373201_p90 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 138878 139936
BBD52243.1 LC373201_p63 prohead protease gp21 phrog_207 head maturation protease head and packaging 1 91533 92198
BBD52182.1 LC373201_p2 dUTP diphosphatase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 379 933
BBD52213.1 LC373201_p33 hypothetical protein phrog_4677 unknown function unknown function -1 19059 19391
BBD52217.1 LC373201_p37 hypothetical protein phrog_4814 unknown function unknown function -1 20922 21263
BBD52235.1 LC373201_p55 baseplate wedge subunit gp7 phrog_3465 head closure Hc2 connector 1 63300 64154
BBD52233.1 LC373201_p53 hypothetical protein phrog_3788 unknown function unknown function -1 60617 61189
BBD52231.1 LC373201_p51 DNA polymerase phrog_262 DNA polymerase DNA, RNA and nucleotide metabolism -1 47117 50116
BBD52262.1 LC373201_p82 hypothetical protein singleton unknown function unknown function 1 123029 123289
BBD52181.1 LC373201_p1 predicted unusual protein kinase phrog_139 deoxynucleoside monophosphate kinase other 1 2 382
BBD52279.1 LC373201_p99 late promoter transcription accessory protein gp33 phrog_254 late promoter transcriptional regulator transcription regulation 1 153505 153750
BBD52265.1 LC373201_p85 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 126768 127295
BBD52209.1 LC373201_p29 hypothetical protein phrog_926 unknown function unknown function -1 17535 17747
BBD52232.1 LC373201_p52 hypothetical protein phrog_4050 unknown function unknown function -1 54891 55592
BBD52188.1 LC373201_p8 hypothetical protein phrog_639 transcriptional regulator transcription regulation 1 4706 5020
BBD52202.1 LC373201_p22 loader ofDNA helicase gp59 phrog_269 DNA helicase loader DNA, RNA and nucleotide metabolism 1 11333 11992
BBD52212.1 LC373201_p32 hypothetical protein phrog_4059 unknown function unknown function -1 18674 18988
BBD52284.1 LC373201_p104 thymidylate synthase singleton unknown function unknown function 1 159805 160071
BBD52263.1 LC373201_p83 DNA-binding protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 123833 124111
BBD52204.1 LC373201_p24 tail length tape measure protein singleton unknown function unknown function -1 13000 13944
BBD52254.1 LC373201_p74 clamp loader subunit gp62 phrog_225 clamp loader of DNA polymerase DNA, RNA and nucleotide metabolism 1 105766 106188
BBD52206.1 LC373201_p26 baseplate wedge subunit gp53 phrog_232 baseplate wedge subunit tail -1 15340 15894
BBD52255.1 LC373201_p75 nucleoside triphosphate pyrophosphohydrolase phrog_2144 MazG-like pyrophosphatase other 1 106699 107562
BBD52199.1 LC373201_p19 hypothetical membrane protein phrog_14388 membrane protein moron, auxiliary metabolic gene and host takeover 1 10528 10773
BBD52218.1 LC373201_p38 hypothetical protein phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 21270 21965
BBD52278.1 LC373201_p98 holliday junction resolvase RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 152369 152971
BBD52220.1 LC373201_p40 Tk.4 protein phrog_335 phosphatase other -1 23903 24502
BBD52223.1 LC373201_p43 topoisomerase II large subunit phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism -1 27184 29097
BBD52186.1 LC373201_p6 DNA primase-helicase subunit gp41 phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 2865 4292
BBD52219.1 LC373201_p39 hypothetical protein phrog_2531 unknown function unknown function -1 22587 22892
BBD52252.1 LC373201_p72 sliding clamp DNA polymerase accessory protein phrog_223 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 104024 104692
BBD52276.1 LC373201_p96 Gp5 baseplate hub subunit and tail lysozyme phrog_430 baseplate hub subunit and tail lysozyme tail -1 148358 149968
BBD52240.1 LC373201_p60 tail sheath protein gp18 phrog_23 tail sheath tail 1 86734 88632