Genomic map of Pseudomonas phage vB_PaeM_C2-10_Ab02 (LN610572)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LN610572
Definition
Pseudomonas phage vB_PaeM_C2-10_Ab02, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus; Pseudomonas virus CAb02.
DB of origin
PVOG
Length
93848
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
175
%GC
49.39
Number of singletons
0
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CEF89104.1 LN610572_p174 hypothetical protein phrog_7991 unknown function unknown function -1 92705 92842
CEF88937.1 LN610572_p7 hypothetical protein phrog_15763 unknown function unknown function -1 2729 3133
CEF88940.1 LN610572_p10 hypothetical protein phrog_7430 unknown function unknown function -1 4107 4418
CEF88974.1 LN610572_p44 hypothetical protein phrog_343 unknown function unknown function -1 19522 19815
CEF89052.1 LN610572_p122 hypothetical protein phrog_7016 unknown function unknown function 1 70645 70857
CEF89054.1 LN610572_p124 hypothetical protein phrog_9669 unknown function unknown function 1 71836 71952
CEF89075.1 LN610572_p145 hypothetical protein phrog_6871 unknown function unknown function 1 82175 82462
CEF89057.1 LN610572_p127 Ribonucleotide reductase of class Ia phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73335 74381
CEF89035.1 LN610572_p105 hypothetical protein phrog_3878 unknown function unknown function 1 63104 63502
CEF89004.1 LN610572_p74 hypothetical protein phrog_587 structural protein head and packaging 1 43601 44332
CEF88955.1 LN610572_p25 hypothetical protein phrog_2071 ATPase other -1 11138 11554
CEF89102.1 LN610572_p172 hypothetical protein phrog_13569 unknown function unknown function 1 91905 92042
CEF88931.1 LN610572_p1 hypothetical protein phrog_7991 unknown function unknown function -1 22 159
CEF89006.1 LN610572_p76 hypothetical protein phrog_4628 tail fiber assembly tail 1 46395 46772
CEF89050.1 LN610572_p120 hypothetical protein phrog_6873 unknown function unknown function 1 70078 70287
CEF89058.1 LN610572_p128 Ribonucleotide reductase of class Ia phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 74374 76119
CEF89039.1 LN610572_p109 hypothetical protein phrog_7883 unknown function unknown function 1 65585 65818
CEF89089.1 LN610572_p159 hypothetical protein phrog_6935 unknown function unknown function 1 86800 87192
CEF89043.1 LN610572_p113 hypothetical protein phrog_5822 unknown function unknown function 1 67701 68099
CEF88977.1 LN610572_p47 hypothetical protein phrog_5067 unknown function unknown function -1 20654 21010
CEF89070.1 LN610572_p140 hypothetical protein phrog_6266 unknown function unknown function 1 79184 80170
CEF88973.1 LN610572_p43 hypothetical protein phrog_7505 unknown function unknown function -1 19336 19521
CEF89003.1 LN610572_p73 hypothetical protein phrog_6 baseplate wedge subunit tail 1 42119 43582
CEF88976.1 LN610572_p46 hypothetical protein phrog_1827 ATP-dependent protease other -1 20058 20606
CEF89066.1 LN610572_p136 hypothetical protein phrog_6974 unknown function unknown function 1 77823 78308
CEF88997.1 LN610572_p67 hypothetical tail length tape-measure protein phrog_991 tail length tape measure protein tail 1 36598 38964
CEF89025.1 LN610572_p95 hypothetical protein phrog_4991 unknown function unknown function 1 56027 56329
CEF89072.1 LN610572_p142 hypothetical protein phrog_3768 unknown function unknown function 1 81189 81668
CEF89011.1 LN610572_p81 hypothetical protein phrog_4172 unknown function unknown function 1 49679 49984
CEF89068.1 LN610572_p138 hypothetical protein phrog_5041 unknown function unknown function 1 78514 78753
CEF88983.1 LN610572_p53 capsid and scaffold phrog_1530 DNA methyltransferase other 1 28231 28701
CEF88978.1 LN610572_p48 hypothetical protein phrog_5019 unknown function unknown function -1 21007 21474
CEF88943.1 LN610572_p13 hypothetical protein phrog_7178 unknown function unknown function -1 5117 5332
CEF88933.1 LN610572_p3 hypothetical protein phrog_8631 unknown function unknown function 1 1445 1603
CEF89008.1 LN610572_p78 peptidoglycan binding protein phrog_2860 endolysin head and packaging 1 48300 48860
CEF89029.1 LN610572_p99 hypothetical protein phrog_6115 unknown function unknown function 1 57186 57431
CEF88949.1 LN610572_p19 hypothetical protein phrog_6391 unknown function unknown function -1 7456 7605
CEF89088.1 LN610572_p158 hypothetical protein phrog_4025 unknown function unknown function 1 86537 86803
CEF89046.1 LN610572_p116 hypothetical protein phrog_4305 unknown function unknown function 1 68757 68927
CEF88996.1 LN610572_p66 hypothetical protein phrog_4625 unknown function unknown function 1 36449 36601
CEF89037.1 LN610572_p107 hypothetical protein phrog_6824 unknown function unknown function 1 63700 64410
CEF89098.1 LN610572_p168 hypothetical protein phrog_3968 unknown function unknown function 1 90681 90911
CEF89097.1 LN610572_p167 hypothetical protein phrog_7753 unknown function unknown function 1 90214 90666
CEF89100.1 LN610572_p170 hypothetical protein phrog_11201 unknown function unknown function 1 91294 91560
CEF89033.1 LN610572_p103 endonuclease VII phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 61694 62173
CEF88964.1 LN610572_p34 hypothetical protein phrog_2686 unknown function unknown function -1 15586 16047
CEF88935.1 LN610572_p5 hypothetical protein phrog_7262 unknown function unknown function -1 1916 2326
CEF89101.1 LN610572_p171 hypothetical protein phrog_4310 unknown function unknown function 1 91660 91854
CEF89103.1 LN610572_p173 hypothetical protein phrog_9686 unknown function unknown function 1 92074 92232
CEF89015.1 LN610572_p85 hypothetical protein phrog_6945 unknown function unknown function -1 51024 51833
CEF88979.1 LN610572_p49 hypothetical protein phrog_10364 unknown function unknown function 1 21947 22135
CEF89094.1 LN610572_p164 Acriflavin resistance protein phrog_5680 unknown function unknown function 1 89153 89680
CEF89005.1 LN610572_p75 autotransporter phrog_2282 tail fiber protein tail 1 44343 46358
CEF89017.1 LN610572_p87 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 51984 53129
CEF89096.1 LN610572_p166 hypothetical protein phrog_6876 unknown function unknown function 1 89989 90159
CEF89053.1 LN610572_p123 3'-phosphatase, 5'-polynucleotide kinase phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 70850 71800
CEF89027.1 LN610572_p97 hypothetical protein phrog_6310 unknown function unknown function 1 56870 56998
CEF89095.1 LN610572_p165 hypothetical protein phrog_6605 unknown function unknown function 1 89749 89961
CEF89016.1 LN610572_p86 hypothetical protein phrog_7461 unknown function unknown function -1 51826 51981
CEF89010.1 LN610572_p80 hypothetical protein phrog_4349 Rz-like spanin lysis 1 49104 49547
CEF89086.1 LN610572_p156 hypothetical protein phrog_4261 unknown function unknown function 1 85975 86283
CEF88993.1 LN610572_p63 hypothetical protein phrog_280 virion structural protein head and packaging 1 34977 35477
CEF88946.1 LN610572_p16 hypothetical protein phrog_6932 unknown function unknown function -1 6162 6539
CEF88975.1 LN610572_p45 hypothetical protein phrog_6961 unknown function unknown function -1 19812 19997
CEF89087.1 LN610572_p157 hypothetical protein phrog_6913 unknown function unknown function 1 86280 86504
CEF88948.1 LN610572_p18 hypothetical protein phrog_8023 unknown function unknown function -1 7137 7454
CEF89028.1 LN610572_p98 hypothetical protein phrog_7814 unknown function unknown function 1 56985 57176
CEF89021.1 LN610572_p91 hypothetical protein phrog_2834 unknown function unknown function 1 54566 54820
CEF89014.1 LN610572_p84 hypothetical protein phrog_7083 unknown function unknown function -1 50702 51022
CEF89067.1 LN610572_p137 hypothetical protein phrog_6846 unknown function unknown function 1 78318 78512
CEF89048.1 LN610572_p118 hypothetical protein phrog_221 metallo-phosphoesterase other 1 69108 69887
CEF88965.1 LN610572_p35 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 16060 17268
CEF89000.1 LN610572_p70 hypothetical protein phrog_196 baseplate hub tail 1 40081 40998
CEF89044.1 LN610572_p114 hypothetical protein phrog_7621 unknown function unknown function 1 68096 68326
CEF88941.1 LN610572_p11 hypothetical protein phrog_2614 unknown function unknown function -1 4421 4780
CEF88999.1 LN610572_p69 hypothetical protein phrog_349 virion structural protein head and packaging 1 39728 40084
CEF89080.1 LN610572_p150 hypothetical protein phrog_7133 unknown function unknown function 1 83673 84056
CEF88980.1 LN610572_p50 hypothetical protein phrog_3900 unknown function unknown function 1 22278 22601
CEF88962.1 LN610572_p32 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 14399 14959
CEF89078.1 LN610572_p148 hypothetical protein phrog_2267 unknown function unknown function 1 82907 83215
CEF89073.1 LN610572_p143 hypothetical protein phrog_5201 unknown function unknown function 1 81750 82019
CEF89009.1 LN610572_p79 hypothetical protein phrog_5847 holin lysis 1 48878 49117
CEF89018.1 LN610572_p88 hypothetical protein phrog_4794 unknown function unknown function -1 53161 53394
CEF89023.1 LN610572_p93 hypothetical protein phrog_7101 unknown function unknown function 1 55208 55873
CEF88968.1 LN610572_p38 hypothetical protein phrog_2251 unknown function unknown function -1 17930 18142
CEF88954.1 LN610572_p24 Ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 10262 11128
CEF88994.1 LN610572_p64 hypothetical protein phrog_280 virion structural protein head and packaging 1 35477 35956
CEF88985.1 LN610572_p55 hypothetical protein phrog_49 head decoration head and packaging 1 29643 30053
CEF89034.1 LN610572_p104 DNA polymerase, part II phrog_16667 DNA polymerase I DNA, RNA and nucleotide metabolism 1 62325 63014
CEF89093.1 LN610572_p163 hypothetical protein phrog_1106 unknown function unknown function 1 88586 89029
CEF89062.1 LN610572_p132 hypothetical protein phrog_7088 unknown function unknown function 1 76797 77033
CEF89064.1 LN610572_p134 hypothetical protein phrog_7233 unknown function unknown function 1 77337 77522
CEF89060.1 LN610572_p130 hypothetical protein phrog_343 unknown function unknown function 1 76337 76564
CEF89082.1 LN610572_p152 hypothetical protein phrog_5336 unknown function unknown function 1 84808 85146
CEF89024.1 LN610572_p94 hypothetical protein phrog_6917 unknown function unknown function 1 55860 56024
CEF89085.1 LN610572_p155 hypothetical protein phrog_6818 unknown function unknown function 1 85762 85956
CEF89036.1 LN610572_p106 hypothetical protein phrog_7532 unknown function unknown function 1 63531 63698
CEF88998.1 LN610572_p68 hypothetical protein phrog_817 tail fiber protein tail 1 38961 39722
CEF88969.1 LN610572_p39 hypothetical protein phrog_5276 unknown function unknown function -1 18139 18408
CEF89007.1 LN610572_p77 tail fiber protein phrog_2282 tail fiber protein tail 1 46784 48283
CEF88932.1 LN610572_p2 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 343 936
CEF88952.1 LN610572_p22 Nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 8302 9990
CEF88953.1 LN610572_p23 hypothetical protein phrog_7663 unknown function unknown function -1 10047 10265
CEF88970.1 LN610572_p40 hypothetical protein phrog_3948 unknown function unknown function -1 18417 18767
CEF88934.1 LN610572_p4 hypothetical protein phrog_7340 unknown function unknown function -1 1657 1923
CEF89076.1 LN610572_p146 hypothetical protein phrog_5289 unknown function unknown function 1 82475 82708
CEF88966.1 LN610572_p36 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 17265 17681
CEF88958.1 LN610572_p28 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 12898 13173
CEF89065.1 LN610572_p135 hypothetical protein phrog_6863 unknown function unknown function 1 77563 77811
CEF88939.1 LN610572_p9 hypothetical protein phrog_7742 unknown function unknown function -1 3841 4119
CEF88963.1 LN610572_p33 hypothetical protein phrog_938 endolysin lysis -1 14961 15521
CEF89022.1 LN610572_p92 hypothetical protein phrog_4256 unknown function unknown function 1 54822 55211
CEF88944.1 LN610572_p14 hypothetical protein phrog_6967 unknown function unknown function -1 5329 5670
CEF89019.1 LN610572_p89 hypothetical protein phrog_6163 unknown function unknown function 1 53847 54044
CEF88971.1 LN610572_p41 hypothetical protein phrog_6991 unknown function unknown function -1 18748 19026
CEF89074.1 LN610572_p144 hypothetical protein phrog_6353 unknown function unknown function 1 82032 82175
CEF89091.1 LN610572_p161 hypothetical protein phrog_6091 unknown function unknown function 1 87963 88208
CEF88947.1 LN610572_p17 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 6559 7179
CEF88967.1 LN610572_p37 hypothetical protein phrog_7094 unknown function unknown function -1 17684 17920
CEF89032.1 LN610572_p102 DNA polymerase, part I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59590 61590
CEF89099.1 LN610572_p169 hypothetical protein phrog_5746 unknown function unknown function 1 90908 91198
CEF89090.1 LN610572_p160 hypothetical protein phrog_3303 unknown function unknown function 1 87307 87891
CEF89031.1 LN610572_p101 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 57667 59529
CEF89092.1 LN610572_p162 hypothetical protein phrog_4261 unknown function unknown function 1 88220 88549
CEF89038.1 LN610572_p108 hypothetical protein phrog_2544 unknown function unknown function 1 64512 65516
CEF89041.1 LN610572_p111 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 66092 67144
CEF88942.1 LN610572_p12 hypothetical protein phrog_2614 unknown function unknown function -1 4777 5061
CEF88990.1 LN610572_p60 hypothetical protein phrog_4087 unknown function unknown function 1 32485 33048
CEF89030.1 LN610572_p100 hypothetical protein phrog_7863 unknown function unknown function 1 57428 57613
CEF88951.1 LN610572_p21 hypothetical protein phrog_6997 unknown function unknown function -1 8093 8290
CEF88936.1 LN610572_p6 hypothetical protein phrog_6773 unknown function unknown function -1 2316 2732
CEF88981.1 LN610572_p51 terminase, large subunit phrog_979 terminase large subunit head and packaging 1 25249 26769
CEF89083.1 LN610572_p153 hypothetical protein phrog_7542 unknown function unknown function 1 85146 85499
CEF89002.1 LN610572_p72 hypothetical protein phrog_120 baseplate wedge subunit tail 1 41746 42117
CEF88995.1 LN610572_p65 hypothetical protein phrog_1613 tail assembly chaperone tail 1 35970 36341
CEF89026.1 LN610572_p96 hypothetical protein phrog_7141 unknown function unknown function 1 56330 56752
CEF88992.1 LN610572_p62 hypothetical protein phrog_280 virion structural protein head and packaging 1 34378 34902
CEF88984.1 LN610572_p54 hypothetical protein phrog_4103 unknown function unknown function 1 28698 29615
CEF88950.1 LN610572_p20 hypothetical protein phrog_335 phosphatase other -1 7617 8096
CEF89020.1 LN610572_p90 hypothetical protein phrog_3754 unknown function unknown function 1 54047 54532
CEF88938.1 LN610572_p8 hypothetical protein phrog_7453 unknown function unknown function -1 3176 3838
CEF89055.1 LN610572_p125 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72007 72972
CEF88991.1 LN610572_p61 hypothetical protein phrog_205 tail sheath tail 1 33061 34347
CEF88945.1 LN610572_p15 hypothetical protein phrog_3360 unknown function unknown function -1 5672 6175
CEF89069.1 LN610572_p139 hypothetical protein phrog_6076 unknown function unknown function 1 78816 79016
CEF89051.1 LN610572_p121 hypothetical protein phrog_6971 unknown function unknown function 1 70306 70641
CEF88987.1 LN610572_p57 hypothetical protein phrog_1732 unknown function unknown function 1 31181 31657
CEF89012.1 LN610572_p82 hypothetical protein phrog_3899 unknown function unknown function 1 50020 50334
CEF88986.1 LN610572_p56 hypothetical protein phrog_29 major head protein head and packaging 1 30097 31131
CEF89013.1 LN610572_p83 hypothetical protein phrog_2827 unknown function unknown function -1 50382 50690
CEF89047.1 LN610572_p117 hypothetical protein phrog_4305 unknown function unknown function 1 68929 69111
CEF88956.1 LN610572_p26 hypothetical protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 11565 12482
CEF89084.1 LN610572_p154 hypothetical protein phrog_15780 unknown function unknown function 1 85577 85690
CEF89077.1 LN610572_p147 hypothetical protein phrog_6265 unknown function unknown function 1 82779 82907
CEF89049.1 LN610572_p119 hypothetical protein phrog_7135 unknown function unknown function 1 69884 70066
CEF89001.1 LN610572_p71 hypothetical protein phrog_11 baseplate spike tail 1 40995 41735
CEF89059.1 LN610572_p129 hypothetical protein phrog_5604 unknown function unknown function 1 76194 76340
CEF89042.1 LN610572_p112 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67141 67704
CEF89079.1 LN610572_p149 hypothetical protein phrog_4323 unknown function unknown function 1 83290 83436
CEF88959.1 LN610572_p29 hypothetical protein phrog_5447 unknown function unknown function -1 13175 13411
CEF88957.1 LN610572_p27 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 12494 12901
CEF89081.1 LN610572_p151 hypothetical protein phrog_2554 unknown function unknown function 1 84132 84803
CEF89061.1 LN610572_p131 hypothetical protein phrog_6898 unknown function unknown function 1 76564 76797
CEF89040.1 LN610572_p110 hypothetical protein phrog_6983 unknown function unknown function 1 65828 66049
CEF89045.1 LN610572_p115 hypothetical protein phrog_7013 unknown function unknown function 1 68323 68760
CEF89105.1 LN610572_p175 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 93026 93619
CEF89056.1 LN610572_p126 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72974 73318
CEF89071.1 LN610572_p141 hypothetical protein phrog_8175 unknown function unknown function 1 80393 80566
CEF88982.1 LN610572_p52 hypothetical protein phrog_113 portal protein head and packaging 1 26782 28221
CEF89063.1 LN610572_p133 hypothetical protein phrog_9028 unknown function unknown function 1 77033 77347
CEF88988.1 LN610572_p58 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 31695 32108
CEF88960.1 LN610572_p30 Phosphohydrolase (MutT/nudix family protein) phrog_547 phosphoesterase other -1 13424 13978
CEF88989.1 LN610572_p59 hypothetical protein phrog_939 head protein head and packaging 1 32108 32488
CEF88972.1 LN610572_p42 hypothetical protein phrog_7048 unknown function unknown function -1 19023 19301
CEF88961.1 LN610572_p31 hypothetical protein phrog_6781 unknown function unknown function -1 13978 14409