Genomic map of Pseudomonas phage vB_PaeM_C2-10_Ab08 (LN610575)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LN610575
Definition
Pseudomonas phage vB_PaeM_C2-10_Ab08, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus; Pseudomonas virus CAb1.
DB of origin
PVOG
Length
93503
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
175
%GC
49.2
Number of singletons
1
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CEF89486.1 LN610575_p171 hypothetical protein phrog_4310 unknown function unknown function 1 91316 91510
CEF89374.1 LN610575_p59 hypothetical protein phrog_4087 unknown function unknown function 1 32544 33107
CEF89437.1 LN610575_p122 3'-phosphatase, 5'-polynucleotide kinase phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 70496 71446
CEF89318.1 LN610575_p3 hypothetical protein phrog_7340 unknown function unknown function -1 1449 1694
CEF89460.1 LN610575_p145 hypothetical protein phrog_6871 unknown function unknown function 1 81831 82118
CEF89424.1 LN610575_p109 hypothetical protein phrog_6983 unknown function unknown function 1 65472 65696
CEF89368.1 LN610575_p53 hypothetical protein phrog_4103 unknown function unknown function 1 28755 29672
CEF89449.1 LN610575_p134 hypothetical protein phrog_6863 unknown function unknown function 1 77209 77457
CEF89372.1 LN610575_p57 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 31754 32167
CEF89407.1 LN610575_p92 hypothetical protein phrog_2834 unknown function unknown function 1 54902 55156
CEF89355.1 LN610575_p40 hypothetical protein phrog_6991 unknown function unknown function -1 18806 19084
CEF89406.1 LN610575_p91 hypothetical protein phrog_3754 unknown function unknown function 1 54394 54879
CEF89363.1 LN610575_p48 hypothetical protein phrog_10364 unknown function unknown function 1 22005 22193
CEF89484.1 LN610575_p169 hypothetical protein phrog_5746 unknown function unknown function 1 90564 90854
CEF89332.1 LN610575_p17 hypothetical protein phrog_6391 unknown function unknown function -1 6847 6996
CEF89458.1 LN610575_p143 hypothetical protein phrog_5201 unknown function unknown function 1 81404 81673
CEF89388.1 LN610575_p73 hypothetical protein phrog_587 structural protein head and packaging 1 43660 44412
CEF89426.1 LN610575_p111 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66787 67350
CEF89367.1 LN610575_p52 capsid protein phrog_1530 DNA methyltransferase other 1 28288 28758
CEF89361.1 LN610575_p46 hypothetical protein phrog_5067 unknown function unknown function -1 20712 21068
CEF89404.1 LN610575_p89 hypothetical protein phrog_464 unknown function unknown function 1 53880 54191
CEF89353.1 LN610575_p38 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17817 18476
CEF89433.1 LN610575_p118 hypothetical protein phrog_7135 unknown function unknown function 1 69530 69712
CEF89394.1 LN610575_p79 hypothetical protein phrog_4349 Rz-like spanin lysis 1 49184 49627
CEF89400.1 LN610575_p85 hypothetical protein phrog_6945 unknown function unknown function -1 51104 51913
CEF89429.1 LN610575_p114 hypothetical protein phrog_7013 unknown function unknown function 1 67969 68406
CEF89413.1 LN610575_p98 hypothetical protein phrog_6310 unknown function unknown function 1 57197 57325
CEF89466.1 LN610575_p151 hypothetical protein phrog_2554 unknown function unknown function 1 83788 84459
CEF89487.1 LN610575_p172 hypothetical protein phrog_13569 unknown function unknown function 1 91561 91698
CEF89330.1 LN610575_p15 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 5956 6537
CEF89373.1 LN610575_p58 hypothetical protein phrog_939 head protein head and packaging 1 32167 32547
CEF89425.1 LN610575_p110 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 65738 66790
CEF89319.1 LN610575_p4 hypothetical protein phrog_7262 unknown function unknown function -1 1687 2097
CEF89342.1 LN610575_p27 hypothetical protein phrog_5447 unknown function unknown function -1 12574 12810
CEF89428.1 LN610575_p113 hypothetical protein phrog_7621 unknown function unknown function 1 67742 67972
CEF89448.1 LN610575_p133 hypothetical protein phrog_7233 unknown function unknown function 1 76983 77168
CEF89415.1 LN610575_p100 hypothetical protein phrog_6115 unknown function unknown function 1 57513 57758
CEF89399.1 LN610575_p84 hypothetical protein phrog_7083 unknown function unknown function -1 50782 51102
CEF89352.1 LN610575_p37 hypothetical protein phrog_5276 unknown function unknown function -1 17539 17808
CEF89381.1 LN610575_p66 tail length tape-measure protein phrog_991 tail length tape measure protein tail 1 36657 39023
CEF89447.1 LN610575_p132 hypothetical protein phrog_9028 unknown function unknown function 1 76679 76993
CEF89476.1 LN610575_p161 hypothetical protein phrog_6091 unknown function unknown function 1 87619 87864
CEF89401.1 LN610575_p86 hypothetical protein phrog_7461 unknown function unknown function -1 51906 52064
CEF89360.1 LN610575_p45 hypothetical protein phrog_1827 ATP-dependent protease other -1 20116 20664
CEF89384.1 LN610575_p69 hypothetical protein phrog_196 baseplate hub tail 1 40140 41057
CEF89435.1 LN610575_p120 hypothetical protein phrog_6971 unknown function unknown function 1 69952 70287
CEF89376.1 LN610575_p61 hypothetical protein phrog_280 virion structural protein head and packaging 1 34437 34961
CEF89420.1 LN610575_p105 hypothetical protein phrog_7532 unknown function unknown function 1 63148 63315
CEF89366.1 LN610575_p51 hypothetical protein phrog_113 portal protein head and packaging 1 26839 28278
CEF89427.1 LN610575_p112 hypothetical protein phrog_5822 unknown function unknown function 1 67347 67745
CEF89338.1 LN610575_p23 hypothetical protein phrog_2071 ATPase other -1 10537 10953
CEF89482.1 LN610575_p167 hypothetical protein phrog_7753 unknown function unknown function 1 89870 90322
CEF89333.1 LN610575_p18 hypothetical protein phrog_335 phosphatase other -1 7008 7487
CEF89418.1 LN610575_p103 DNA Polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59917 62631
CEF89323.1 LN610575_p8 hypothetical protein phrog_7430 unknown function unknown function -1 3502 3813
CEF89405.1 LN610575_p90 hypothetical protein phrog_6163 unknown function unknown function 1 54194 54391
CEF89468.1 LN610575_p153 hypothetical protein phrog_7542 unknown function unknown function 1 84802 85155
CEF89451.1 LN610575_p136 hypothetical protein phrog_6846 unknown function unknown function 1 77964 78158
CEF89475.1 LN610575_p160 hypothetical protein phrog_3303 unknown function unknown function 1 86963 87547
CEF89329.1 LN610575_p14 hypothetical protein phrog_6932 unknown function unknown function -1 5559 5936
CEF89488.1 LN610575_p173 hypothetical protein phrog_9686 unknown function unknown function 1 91730 91888
CEF89334.1 LN610575_p19 hypothetical protein phrog_6997 unknown function unknown function -1 7484 7681
CEF89470.1 LN610575_p155 hypothetical protein phrog_6818 unknown function unknown function 1 85418 85612
CEF89416.1 LN610575_p101 hypothetical protein phrog_7863 unknown function unknown function 1 57755 57940
CEF89377.1 LN610575_p62 hypothetical protein phrog_280 virion structural protein head and packaging 1 35036 35536
CEF89434.1 LN610575_p119 hypothetical protein phrog_6873 unknown function unknown function 1 69724 69933
CEF89335.1 LN610575_p20 Nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 7692 9380
CEF89325.1 LN610575_p10 hypothetical protein phrog_2614 unknown function unknown function -1 4165 4458
CEF89481.1 LN610575_p166 hypothetical protein phrog_6876 unknown function unknown function 1 89645 89815
CEF89317.1 LN610575_p2 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 343 936
CEF89410.1 LN610575_p95 hypothetical protein phrog_6917 unknown function unknown function 1 56187 56351
CEF89469.1 LN610575_p154 hypothetical protein phrog_15780 unknown function unknown function 1 85233 85346
CEF89443.1 LN610575_p128 hypothetical protein phrog_5604 unknown function unknown function 1 75840 75986
CEF89358.1 LN610575_p43 hypothetical protein phrog_343 unknown function unknown function -1 19580 19873
CEF89378.1 LN610575_p63 hypothetical protein phrog_280 virion structural protein head and packaging 1 35536 36015
CEF89467.1 LN610575_p152 hypothetical protein phrog_5336 unknown function unknown function 1 84464 84802
CEF89365.1 LN610575_p50 terminase, large subunit phrog_979 terminase large subunit head and packaging 1 25306 26826
CEF89446.1 LN610575_p131 hypothetical protein phrog_7088 unknown function unknown function 1 76443 76679
CEF89439.1 LN610575_p124 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 71653 72618
CEF89408.1 LN610575_p93 hypothetical protein phrog_4256 unknown function unknown function 1 55158 55547
CEF89351.1 LN610575_p36 hypothetical protein phrog_2251 unknown function unknown function -1 17330 17542
CEF89344.1 LN610575_p29 hypothetical protein phrog_6781 unknown function unknown function -1 13378 13809
CEF89489.1 LN610575_p174 hypothetical protein phrog_7991 unknown function unknown function -1 92361 92498
CEF89346.1 LN610575_p31 hypothetical protein phrog_938 endolysin lysis -1 14361 14921
CEF89438.1 LN610575_p123 hypothetical protein phrog_9669 unknown function unknown function 1 71482 71598
CEF89375.1 LN610575_p60 hypothetical protein phrog_205 tail sheath tail 1 33120 34406
CEF89357.1 LN610575_p42 hypothetical protein phrog_7505 unknown function unknown function -1 19394 19579
CEF89478.1 LN610575_p163 hypothetical protein phrog_1106 unknown function unknown function 1 88242 88685
CEF89341.1 LN610575_p26 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 12297 12572
CEF89483.1 LN610575_p168 hypothetical protein phrog_3968 unknown function unknown function 1 90337 90567
CEF89421.1 LN610575_p106 hypothetical protein phrog_6824 unknown function unknown function 1 63317 64027
CEF89432.1 LN610575_p117 hypothetical protein phrog_221 metallo-phosphoesterase other 1 68754 69533
CEF89471.1 LN610575_p156 hypothetical protein phrog_4261 unknown function unknown function 1 85631 85939
CEF89396.1 LN610575_p81 hypothetical protein phrog_4172 unknown function unknown function 1 49759 50064
CEF89320.1 LN610575_p5 hypothetical protein phrog_6773 unknown function unknown function -1 2087 2503
CEF89455.1 LN610575_p140 hypothetical protein phrog_8175 unknown function unknown function 1 80039 80212
CEF89464.1 LN610575_p149 hypothetical protein phrog_4323 unknown function unknown function 1 82944 83090
CEF89485.1 LN610575_p170 hypothetical protein phrog_11201 unknown function unknown function 1 90950 91216
CEF89380.1 LN610575_p65 hypothetical protein phrog_4625 unknown function unknown function 1 36508 36660
CEF89370.1 LN610575_p55 hypothetical protein phrog_29 major head protein head and packaging 1 30155 31189
CEF89349.1 LN610575_p34 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 16665 17081
CEF89473.1 LN610575_p158 hypothetical protein phrog_4025 unknown function unknown function 1 86193 86459
CEF89337.1 LN610575_p22 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 9652 10527
CEF89463.1 LN610575_p148 hypothetical protein phrog_2267 unknown function unknown function 1 82562 82870
CEF89345.1 LN610575_p30 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 13799 14359
CEF89412.1 LN610575_p97 hypothetical protein phrog_7141 unknown function unknown function 1 56657 57079
CEF89362.1 LN610575_p47 hypothetical protein phrog_5019 unknown function unknown function -1 21065 21532
CEF89462.1 LN610575_p147 hypothetical protein phrog_6265 unknown function unknown function 1 82434 82562
CEF89414.1 LN610575_p99 hypothetical protein phrog_7814 unknown function unknown function 1 57312 57503
CEF89316.1 LN610575_p1 hypothetical protein phrog_7991 unknown function unknown function -1 22 159
CEF89382.1 LN610575_p67 hypothetical protein phrog_817 tail fiber protein tail 1 39020 39781
CEF89339.1 LN610575_p24 RNA ligase phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 10964 11881
CEF89457.1 LN610575_p142 hypothetical protein phrog_3768 unknown function unknown function 1 80841 81314
CEF89422.1 LN610575_p107 hypothetical protein phrog_2544 unknown function unknown function 1 64129 65133
CEF89385.1 LN610575_p70 hypothetical protein phrog_11 baseplate spike tail 1 41054 41794
CEF89350.1 LN610575_p35 hypothetical protein phrog_7094 unknown function unknown function -1 17084 17320
CEF89423.1 LN610575_p108 hypothetical protein phrog_7883 unknown function unknown function 1 65214 65465
CEF89452.1 LN610575_p137 hypothetical protein phrog_5041 unknown function unknown function 1 78160 78399
CEF89354.1 LN610575_p39 hypothetical protein phrog_3948 unknown function unknown function -1 18478 18825
CEF89472.1 LN610575_p157 hypothetical protein phrog_6913 unknown function unknown function 1 85936 86160
CEF89321.1 LN610575_p6 hypothetical protein phrog_7453 unknown function unknown function -1 2526 3233
CEF89453.1 LN610575_p138 hypothetical protein phrog_6076 unknown function unknown function 1 78462 78662
CEF89461.1 LN610575_p146 hypothetical protein phrog_5289 unknown function unknown function 1 82130 82363
CEF89390.1 LN610575_p75 hypothetical protein phrog_4628 tail fiber assembly tail 1 46475 46852
CEF89331.1 LN610575_p16 hypothetical protein phrog_8023 unknown function unknown function -1 6534 6845
CEF89371.1 LN610575_p56 hypothetical protein phrog_1732 unknown function unknown function 1 31240 31716
CEF89431.1 LN610575_p116 hypothetical protein phrog_4305 unknown function unknown function 1 68575 68757
CEF89327.1 LN610575_p12 hypothetical protein phrog_6967 unknown function unknown function -1 4726 5067
CEF89359.1 LN610575_p44 hypothetical protein phrog_6961 unknown function unknown function -1 19870 20055
CEF89398.1 LN610575_p83 hypothetical protein phrog_2827 unknown function unknown function -1 50462 50770
CEF89480.1 LN610575_p165 hypothetical protein phrog_6605 unknown function unknown function 1 89405 89617
CEF89474.1 LN610575_p159 hypothetical protein phrog_6935 unknown function unknown function 1 86456 86848
CEF89322.1 LN610575_p7 hypothetical protein phrog_7742 unknown function unknown function -1 3236 3514
CEF89417.1 LN610575_p102 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 57994 59856
CEF89324.1 LN610575_p9 hypothetical protein phrog_2614 unknown function unknown function -1 3813 4175
CEF89444.1 LN610575_p129 hypothetical protein phrog_343 unknown function unknown function 1 75983 76210
CEF89395.1 LN610575_p80 hypothetical protein phrog_5388 Rz-like spanin lysis 1 49638 49769
CEF89456.1 LN610575_p141 hypothetical protein singleton unknown function unknown function 1 80664 80780
CEF89402.1 LN610575_p87 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 52067 53203
CEF89391.1 LN610575_p76 tail fiber protein phrog_2282 tail fiber protein tail 1 46864 48363
CEF89477.1 LN610575_p162 hypothetical protein phrog_4261 unknown function unknown function 1 87876 88205
CEF89465.1 LN610575_p150 hypothetical protein phrog_7133 unknown function unknown function 1 83329 83712
CEF89411.1 LN610575_p96 hypothetical protein phrog_4991 unknown function unknown function 1 56354 56656
CEF89364.1 LN610575_p49 hypothetical protein phrog_3900 unknown function unknown function 1 22336 22659
CEF89442.1 LN610575_p127 ribonucleotide reductase of class Ia phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 74020 75765
CEF89336.1 LN610575_p21 hypothetical protein phrog_7663 unknown function unknown function -1 9437 9655
CEF89387.1 LN610575_p72 hypothetical protein phrog_6 baseplate wedge subunit tail 1 42178 43641
CEF89450.1 LN610575_p135 hypothetical protein phrog_6974 unknown function unknown function 1 77469 77954
CEF89386.1 LN610575_p71 hypothetical protein phrog_120 baseplate wedge subunit tail 1 41805 42176
CEF89348.1 LN610575_p33 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 15460 16668
CEF89379.1 LN610575_p64 hypothetical protein phrog_1613 tail assembly chaperone tail 1 36029 36400
CEF89347.1 LN610575_p32 hypothetical protein phrog_2686 unknown function unknown function -1 14986 15447
CEF89343.1 LN610575_p28 phosphohydrolase phrog_547 phosphoesterase other -1 12812 13378
CEF89459.1 LN610575_p144 hypothetical protein phrog_6353 unknown function unknown function 1 81688 81831
CEF89356.1 LN610575_p41 hypothetical protein phrog_7048 unknown function unknown function -1 19081 19359
CEF89445.1 LN610575_p130 hypothetical protein phrog_6898 unknown function unknown function 1 76210 76443
CEF89326.1 LN610575_p11 hypothetical protein phrog_7178 unknown function unknown function -1 4514 4729
CEF89369.1 LN610575_p54 hypothetical protein phrog_49 head decoration head and packaging 1 29700 30110
CEF89419.1 LN610575_p104 hypothetical protein phrog_3878 unknown function unknown function 1 62721 63119
CEF89454.1 LN610575_p139 hypothetical protein phrog_6266 unknown function unknown function 1 78829 79815
CEF89328.1 LN610575_p13 hypothetical protein phrog_3360 unknown function unknown function -1 5069 5572
CEF89383.1 LN610575_p68 hypothetical protein phrog_349 virion structural protein head and packaging 1 39787 40143
CEF89430.1 LN610575_p115 hypothetical protein phrog_4305 unknown function unknown function 1 68403 68573
CEF89397.1 LN610575_p82 hypothetical protein phrog_3899 unknown function unknown function 1 50100 50414
CEF89440.1 LN610575_p125 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72620 72964
CEF89340.1 LN610575_p25 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 11893 12300
CEF89403.1 LN610575_p88 hypothetical protein phrog_4794 unknown function unknown function -1 53251 53484
CEF89393.1 LN610575_p78 hypothetical protein phrog_5847 holin lysis 1 48958 49197
CEF89441.1 LN610575_p126 ribonucleotide reductase of class Ia phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72981 74027
CEF89409.1 LN610575_p94 hypothetical protein phrog_7101 unknown function unknown function 1 55544 56200
CEF89389.1 LN610575_p74 autotransporter phrog_2282 tail fiber protein tail 1 44423 46438
CEF89392.1 LN610575_p77 peptidoglycan binding protein phrog_2860 endolysin head and packaging 1 48380 48940
CEF89490.1 LN610575_p175 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 92682 93275
CEF89436.1 LN610575_p121 hypothetical protein phrog_7016 unknown function unknown function 1 70291 70503
CEF89479.1 LN610575_p164 acriflavin resistance protein phrog_5680 unknown function unknown function 1 88809 89336