Genomic map of Pseudomonas phage vB_PaeM_PAO1_Ab17 (LN610576)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LN610576
Definition
Pseudomonas phage vB_PaeM_PAO1_Ab17, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus; Pseudomonas virus Ab03.
DB of origin
PVOG
Length
83598
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
149
%GC
54.59
Number of singletons
5
Number of paralogs
11

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CEF89507.1 LN610576_p17 hypothetical protein phrog_7427 unknown function unknown function 1 8811 9101
CEF89581.1 LN610576_p91 hypotetical protein singleton unknown function unknown function 1 52958 53716
CEF89528.1 LN610576_p38 DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 15559 17121
CEF89519.1 LN610576_p29 hypothetical protein phrog_10165 unknown function unknown function -1 12857 13135
CEF89585.1 LN610576_p95 hypothetical protein phrog_11998 unknown function unknown function 1 54870 55136
CEF89517.1 LN610576_p27 hypothetical protein phrog_19439 unknown function unknown function -1 12313 12480
CEF89498.1 LN610576_p8 hypothetical protein phrog_2176 unknown function unknown function 1 3755 4108
CEF89592.1 LN610576_p102 hypothetical protein phrog_12381 unknown function unknown function 1 61585 61860
CEF89606.1 LN610576_p116 Ribonucleotide reductase of class Ia phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 69482 70501
CEF89605.1 LN610576_p115 hypothetical protein phrog_11821 unknown function unknown function 1 69075 69440
CEF89608.1 LN610576_p118 hypothetical protein phrog_12627 unknown function unknown function 1 71034 71297
CEF89578.1 LN610576_p88 hypothetical protein phrog_3899 unknown function unknown function 1 51760 52047
CEF89512.1 LN610576_p22 hypothetical protein phrog_4029 unknown function unknown function 1 10354 10830
CEF89626.1 LN610576_p136 hypothetical protein phrog_12996 unknown function unknown function 1 78002 78115
CEF89495.1 LN610576_p5 hypothetical protein phrog_2176 unknown function unknown function 1 2166 2528
CEF89599.1 LN610576_p109 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64330 65247
CEF89598.1 LN610576_p108 hypothetical protein phrog_12267 unknown function unknown function 1 64105 64320
CEF89521.1 LN610576_p31 hypothetical protein phrog_10851 unknown function unknown function -1 13326 13901
CEF89600.1 LN610576_p110 hypothetical protein phrog_12364 unknown function unknown function 1 65301 65525
CEF89506.1 LN610576_p16 hypothetical protein phrog_3592 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 8451 8726
CEF89635.1 LN610576_p145 hypothetical protein singleton unknown function unknown function 1 81219 81443
CEF89587.1 LN610576_p97 DNA Polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 57158 59815
CEF89508.1 LN610576_p18 hypothetical protein phrog_5315 unknown function unknown function 1 9251 9397
CEF89520.1 LN610576_p30 hypothetical protein phrog_10597 unknown function unknown function -1 13132 13329
CEF89572.1 LN610576_p82 tail fiber protein phrog_2282 tail fiber protein tail 1 48577 50070
CEF89531.1 LN610576_p41 hypothetical protein phrog_11519 unknown function unknown function -1 18138 18386
CEF89524.1 LN610576_p34 hypothetical protein phrog_1040 peptidase HslV family other -1 14462 14890
CEF89544.1 LN610576_p54 hypothetical protein phrog_33771 unknown function unknown function 1 26409 26588
CEF89570.1 LN610576_p80 tail fiber protein phrog_2282 tail fiber protein tail 1 46085 48148
CEF89596.1 LN610576_p106 hypothetical protein phrog_12564 unknown function unknown function 1 63375 63548
CEF89602.1 LN610576_p112 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 65939 66838
CEF89566.1 LN610576_p76 baseplate protein phrog_11 baseplate spike tail 1 42711 43469
CEF89530.1 LN610576_p40 DNA recombination-mediator protein A phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 17539 18141
CEF89614.1 LN610576_p124 hypothetical protein phrog_12962 unknown function unknown function 1 72845 73012
CEF89558.1 LN610576_p68 hypothetical protein phrog_280 virion structural protein head and packaging 1 36729 37232
CEF89553.1 LN610576_p63 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 33361 33828
CEF89529.1 LN610576_p39 hypothetical protein phrog_3360 unknown function unknown function -1 17099 17584
CEF89526.1 LN610576_p36 hypothetical protein phrog_14060 unknown function unknown function -1 15102 15293
CEF89623.1 LN610576_p133 hypothetical protein phrog_12189 unknown function unknown function 1 76494 77042
CEF89613.1 LN610576_p123 hypothetical protein phrog_12479 unknown function unknown function 1 72525 72845
CEF89569.1 LN610576_p79 hypothetical protein phrog_587 structural protein head and packaging 1 45310 46074
CEF89537.1 LN610576_p47 hypothetical protein phrog_14132 unknown function unknown function -1 21544 21981
CEF89579.1 LN610576_p89 hypothetical protein phrog_12496 unknown function unknown function 1 52156 52575
CEF89542.1 LN610576_p52 hypothetical protein phrog_13098 unknown function unknown function 1 24135 24383
CEF89510.1 LN610576_p20 hypothetical protein phrog_343 unknown function unknown function 1 9870 10151
CEF89573.1 LN610576_p83 peptidoglycan hydrolase, endolysin phrog_2860 endolysin head and packaging 1 50072 50635
CEF89586.1 LN610576_p96 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 55185 57137
CEF89634.1 LN610576_p144 hypothetical protein phrog_4273 unknown function unknown function 1 80687 81202
CEF89546.1 LN610576_p56 terminase, large subunit phrog_979 terminase large subunit head and packaging 1 27168 28586
CEF89533.1 LN610576_p43 hypothetical protein phrog_2686 unknown function unknown function -1 19012 19512
CEF89594.1 LN610576_p104 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 62138 63226
CEF89617.1 LN610576_p127 hypothetical protein phrog_11927 unknown function unknown function 1 74210 74422
CEF89547.1 LN610576_p57 hypothetical protein phrog_113 portal protein head and packaging 1 28596 30089
CEF89502.1 LN610576_p12 hypothetical protein phrog_2614 unknown function unknown function 1 5424 5663
CEF89501.1 LN610576_p11 hypothetical protein phrog_10312 unknown function unknown function 1 5138 5362
CEF89522.1 LN610576_p32 hypothetical protein phrog_10673 unknown function unknown function -1 13903 14139
CEF89624.1 LN610576_p134 hypothetical protein phrog_9396 unknown function unknown function 1 77123 77521
CEF89621.1 LN610576_p131 hypothetical protein singleton unknown function unknown function 1 75681 76121
CEF89588.1 LN610576_p98 hypothetical protein phrog_12101 unknown function unknown function 1 59832 60038
CEF89535.1 LN610576_p45 hypothetical protein phrog_5276 unknown function unknown function -1 20856 21128
CEF89597.1 LN610576_p107 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63545 64108
CEF89560.1 LN610576_p70 hypothetical protein phrog_1613 tail assembly chaperone tail 1 37749 38135
CEF89568.1 LN610576_p78 baseplate protein phrog_6 baseplate wedge subunit tail 1 43842 45308
CEF89497.1 LN610576_p7 hypothetical protein phrog_3483 unknown function unknown function 1 2856 3758
CEF89556.1 LN610576_p66 hypothetical protein phrog_205 tail sheath tail 1 34822 36144
CEF89511.1 LN610576_p21 hypothetical protein phrog_21431 unknown function unknown function 1 10148 10357
CEF89536.1 LN610576_p46 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 21131 21520
CEF89564.1 LN610576_p74 hypothetical protein phrog_349 virion structural protein head and packaging 1 41467 41832
CEF89550.1 LN610576_p60 hypothetical protein phrog_49 head decoration head and packaging 1 31404 31778
CEF89491.1 LN610576_p1 hypothetical protein phrog_11252 unknown function unknown function -1 169 318
CEF89561.1 LN610576_p71 hypothetical protein phrog_4625 unknown function unknown function 1 38156 38377
CEF89629.1 LN610576_p139 hypothetical protein phrog_13058 unknown function unknown function 1 78816 79079
CEF89639.1 LN610576_p149 hypothetical protein phrog_11252 unknown function unknown function -1 82996 83145
CEF89638.1 LN610576_p148 hypothetical protein phrog_4686 unknown function unknown function 1 82238 82456
CEF89593.1 LN610576_p103 hypothetical protein phrog_7029 unknown function unknown function 1 61872 62138
CEF89631.1 LN610576_p141 hypothetical protein phrog_12054 unknown function unknown function 1 79317 79595
CEF89523.1 LN610576_p33 hypothetical protein phrog_10306 unknown function unknown function -1 14136 14471
CEF89499.1 LN610576_p9 hypothetical protein phrog_2176 unknown function unknown function 1 4108 4788
CEF89630.1 LN610576_p140 hypothetical protein phrog_4025 unknown function unknown function 1 79079 79315
CEF89616.1 LN610576_p126 hypothetical protein phrog_12731 unknown function unknown function 1 73559 74038
CEF89534.1 LN610576_p44 ATP-dependent polynucleotide ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 19572 20843
CEF89513.1 LN610576_p23 hypothetical protein phrog_3230 unknown function unknown function 1 10811 11311
CEF89493.1 LN610576_p3 hypothetical protein phrog_2176 unknown function unknown function 1 1474 1815
CEF89622.1 LN610576_p132 hypothetical protein phrog_13123 unknown function unknown function 1 76215 76418
CEF89567.1 LN610576_p77 hypothetical protein phrog_120 baseplate wedge subunit tail 1 43476 43841
CEF89637.1 LN610576_p147 hypothetical protein phrog_11866 unknown function unknown function 1 82030 82248
CEF89604.1 LN610576_p114 Ribonucleotide reductase of class Ia phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 67209 69065
CEF89584.1 LN610576_p94 hypothetical protein phrog_12927 unknown function unknown function 1 54334 54870
CEF89545.1 LN610576_p55 tail fiber protein phrog_1954 virion structural protein head and packaging 1 26661 27086
CEF89548.1 LN610576_p58 hypothetical protein phrog_1530 DNA methyltransferase other 1 30091 30507
CEF89589.1 LN610576_p99 hypothetical protein phrog_12310 unknown function unknown function 1 60185 60370
CEF89575.1 LN610576_p85 hypothetical protein phrog_4349 Rz-like spanin lysis 1 50879 51295
CEF89565.1 LN610576_p75 hypothetical protein phrog_196 baseplate hub tail 1 41833 42714
CEF89601.1 LN610576_p111 3'-phosphatase, 5'-polynucleotide kinase phrog_4521 unknown function unknown function 1 65522 65935
CEF89504.1 LN610576_p14 hypothetical protein phrog_3956 unknown function unknown function 1 6370 7977
CEF89633.1 LN610576_p143 hypothetical protein phrog_11104 unknown function unknown function 1 80068 80610
CEF89518.1 LN610576_p28 hypothetical protein singleton unknown function unknown function -1 12477 12788
CEF89615.1 LN610576_p125 hypothetical protein phrog_11943 unknown function unknown function 1 73065 73562
CEF89620.1 LN610576_p130 hypothetical protein phrog_5289 unknown function unknown function 1 75395 75628
CEF89577.1 LN610576_p87 hypothetical protein phrog_4172 unknown function unknown function 1 51445 51744
CEF89625.1 LN610576_p135 hypothetical protein phrog_12145 unknown function unknown function 1 77588 77977
CEF89494.1 LN610576_p4 hypothetical protein phrog_2176 unknown function unknown function 1 1805 2179
CEF89628.1 LN610576_p138 hypothetical protein phrog_12567 unknown function unknown function 1 78416 78727
CEF89538.1 LN610576_p48 hypothetical protein phrog_3948 unknown function unknown function -1 21990 22256
CEF89627.1 LN610576_p137 hypothetical protein phrog_13320 unknown function unknown function 1 78216 78350
CEF89632.1 LN610576_p142 hypothetical protein phrog_6091 unknown function unknown function 1 79795 79992
CEF89595.1 LN610576_p105 hypothetical protein phrog_519 unknown function unknown function 1 63214 63375
CEF89532.1 LN610576_p42 cell wall hydrolase phrog_938 endolysin lysis -1 18396 18959
CEF89505.1 LN610576_p15 hypothetical protein phrog_3592 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 7970 8458
CEF89552.1 LN610576_p62 hypothetical protein phrog_1732 unknown function unknown function 1 32898 33383
CEF89611.1 LN610576_p121 hypothetical protein phrog_11258 unknown function unknown function 1 71807 72361
CEF89607.1 LN610576_p117 hypothetical protein phrog_1106 unknown function unknown function 1 70562 71044
CEF89540.1 LN610576_p50 hypothetical protein phrog_12276 unknown function unknown function -1 22762 23298
CEF89591.1 LN610576_p101 hypothetical protein phrog_7018 unknown function unknown function 1 61390 61584
CEF89582.1 LN610576_p92 hypothetical protein phrog_13122 unknown function unknown function 1 53726 53911
CEF89574.1 LN610576_p84 hypothetical protein phrog_12175 unknown function unknown function 1 50616 50882
CEF89603.1 LN610576_p113 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 66842 67216
CEF89539.1 LN610576_p49 hypothetical protein phrog_11910 unknown function unknown function -1 22367 22765
CEF89554.1 LN610576_p64 hypothetical protein phrog_939 head protein head and packaging 1 33828 34199
CEF89576.1 LN610576_p86 hypothetical protein phrog_5388 Rz-like spanin lysis 1 51252 51464
CEF89571.1 LN610576_p81 tail fiber assembly protein phrog_4628 tail fiber assembly tail 1 48193 48567
CEF89551.1 LN610576_p61 hypothetical protein phrog_29 major head protein head and packaging 1 31789 32844
CEF89619.1 LN610576_p129 hypothetical protein phrog_6353 unknown function unknown function 1 75252 75395
CEF89636.1 LN610576_p146 hypothetical protein phrog_6876 unknown function unknown function 1 81468 81638
CEF89543.1 LN610576_p53 hypothetical protein phrog_11136 unknown function unknown function 1 24588 24890
CEF89583.1 LN610576_p93 hypothetical protein phrog_13021 unknown function unknown function 1 53952 54347
CEF89527.1 LN610576_p37 hypothetical protein singleton unknown function unknown function -1 15283 15486
CEF89618.1 LN610576_p128 hypothetical protein phrog_5201 unknown function unknown function 1 74936 75235
CEF89503.1 LN610576_p13 hypothetical protein phrog_9984 unknown function unknown function 1 5984 6373
CEF89496.1 LN610576_p6 hypothetical protein phrog_2176 unknown function unknown function 1 2515 2859
CEF89515.1 LN610576_p25 hypothetical protein phrog_5604 unknown function unknown function 1 11635 11784
CEF89590.1 LN610576_p100 hypothetical protein phrog_2544 unknown function unknown function 1 60438 61331
CEF89516.1 LN610576_p26 hypothetical protein phrog_8602 unknown function unknown function 1 11781 11990
CEF89500.1 LN610576_p10 hypothetical protein phrog_10655 unknown function unknown function 1 4798 5145
CEF89525.1 LN610576_p35 hypothetical protein phrog_11756 unknown function unknown function -1 14887 15093
CEF89609.1 LN610576_p119 hypothetical protein phrog_2251 unknown function unknown function 1 71290 71520
CEF89559.1 LN610576_p69 hypothetical protein phrog_280 virion structural protein head and packaging 1 37232 37735
CEF89610.1 LN610576_p120 hypothetical protein phrog_10949 unknown function unknown function 1 71522 71755
CEF89541.1 LN610576_p51 hypothetical protein phrog_3900 unknown function unknown function 1 23777 24133
CEF89612.1 LN610576_p122 hypothetical protein phrog_7860 unknown function unknown function 1 72342 72515
CEF89562.1 LN610576_p72 tail length tape-measure protein phrog_991 tail length tape measure protein tail 1 38367 40703
CEF89563.1 LN610576_p73 hypothetical protein phrog_817 tail fiber protein tail 1 40700 41467
CEF89492.1 LN610576_p2 hypothetical protein phrog_2176 unknown function unknown function 1 1054 1347
CEF89555.1 LN610576_p65 hypothetical protein phrog_4087 unknown function unknown function 1 34199 34819
CEF89509.1 LN610576_p19 hypothetical protein phrog_5614 unknown function unknown function 1 9382 9867
CEF89557.1 LN610576_p67 hypothetical protein phrog_280 virion structural protein head and packaging 1 36155 36676
CEF89549.1 LN610576_p59 hypothetical protein phrog_4103 unknown function unknown function 1 30500 31387
CEF89580.1 LN610576_p90 hypothetical protein phrog_12190 unknown function unknown function 1 52599 52811
CEF89514.1 LN610576_p24 hypothetical protein phrog_7635 unknown function unknown function 1 11394 11651