| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
LN610576 |
Definition |
Pseudomonas phage vB_PaeM_PAO1_Ab17, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus; Pseudomonas virus Ab03. |
DB of origin |
PVOG |
Length |
83598 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
149 |
%GC |
54.59 |
Number of singletons |
5 |
Number of paralogs |
11 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| CEF89507.1 | LN610576_p17 | hypothetical protein | phrog_7427 | unknown function | unknown function | 1 | 8811 | 9101 |
| CEF89581.1 | LN610576_p91 | hypotetical protein | singleton | unknown function | unknown function | 1 | 52958 | 53716 |
| CEF89528.1 | LN610576_p38 | DNA helicase | phrog_1967 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 15559 | 17121 |
| CEF89519.1 | LN610576_p29 | hypothetical protein | phrog_10165 | unknown function | unknown function | -1 | 12857 | 13135 |
| CEF89585.1 | LN610576_p95 | hypothetical protein | phrog_11998 | unknown function | unknown function | 1 | 54870 | 55136 |
| CEF89517.1 | LN610576_p27 | hypothetical protein | phrog_19439 | unknown function | unknown function | -1 | 12313 | 12480 |
| CEF89498.1 | LN610576_p8 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 3755 | 4108 |
| CEF89592.1 | LN610576_p102 | hypothetical protein | phrog_12381 | unknown function | unknown function | 1 | 61585 | 61860 |
| CEF89606.1 | LN610576_p116 | Ribonucleotide reductase of class Ia | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 69482 | 70501 |
| CEF89605.1 | LN610576_p115 | hypothetical protein | phrog_11821 | unknown function | unknown function | 1 | 69075 | 69440 |
| CEF89608.1 | LN610576_p118 | hypothetical protein | phrog_12627 | unknown function | unknown function | 1 | 71034 | 71297 |
| CEF89578.1 | LN610576_p88 | hypothetical protein | phrog_3899 | unknown function | unknown function | 1 | 51760 | 52047 |
| CEF89512.1 | LN610576_p22 | hypothetical protein | phrog_4029 | unknown function | unknown function | 1 | 10354 | 10830 |
| CEF89626.1 | LN610576_p136 | hypothetical protein | phrog_12996 | unknown function | unknown function | 1 | 78002 | 78115 |
| CEF89495.1 | LN610576_p5 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 2166 | 2528 |
| CEF89599.1 | LN610576_p109 | exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64330 | 65247 |
| CEF89598.1 | LN610576_p108 | hypothetical protein | phrog_12267 | unknown function | unknown function | 1 | 64105 | 64320 |
| CEF89521.1 | LN610576_p31 | hypothetical protein | phrog_10851 | unknown function | unknown function | -1 | 13326 | 13901 |
| CEF89600.1 | LN610576_p110 | hypothetical protein | phrog_12364 | unknown function | unknown function | 1 | 65301 | 65525 |
| CEF89506.1 | LN610576_p16 | hypothetical protein | phrog_3592 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | 1 | 8451 | 8726 |
| CEF89635.1 | LN610576_p145 | hypothetical protein | singleton | unknown function | unknown function | 1 | 81219 | 81443 |
| CEF89587.1 | LN610576_p97 | DNA Polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 57158 | 59815 |
| CEF89508.1 | LN610576_p18 | hypothetical protein | phrog_5315 | unknown function | unknown function | 1 | 9251 | 9397 |
| CEF89520.1 | LN610576_p30 | hypothetical protein | phrog_10597 | unknown function | unknown function | -1 | 13132 | 13329 |
| CEF89572.1 | LN610576_p82 | tail fiber protein | phrog_2282 | tail fiber protein | tail | 1 | 48577 | 50070 |
| CEF89531.1 | LN610576_p41 | hypothetical protein | phrog_11519 | unknown function | unknown function | -1 | 18138 | 18386 |
| CEF89524.1 | LN610576_p34 | hypothetical protein | phrog_1040 | peptidase HslV family | other | -1 | 14462 | 14890 |
| CEF89544.1 | LN610576_p54 | hypothetical protein | phrog_33771 | unknown function | unknown function | 1 | 26409 | 26588 |
| CEF89570.1 | LN610576_p80 | tail fiber protein | phrog_2282 | tail fiber protein | tail | 1 | 46085 | 48148 |
| CEF89596.1 | LN610576_p106 | hypothetical protein | phrog_12564 | unknown function | unknown function | 1 | 63375 | 63548 |
| CEF89602.1 | LN610576_p112 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 65939 | 66838 |
| CEF89566.1 | LN610576_p76 | baseplate protein | phrog_11 | baseplate spike | tail | 1 | 42711 | 43469 |
| CEF89530.1 | LN610576_p40 | DNA recombination-mediator protein A | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | -1 | 17539 | 18141 |
| CEF89614.1 | LN610576_p124 | hypothetical protein | phrog_12962 | unknown function | unknown function | 1 | 72845 | 73012 |
| CEF89558.1 | LN610576_p68 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 36729 | 37232 |
| CEF89553.1 | LN610576_p63 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 33361 | 33828 |
| CEF89529.1 | LN610576_p39 | hypothetical protein | phrog_3360 | unknown function | unknown function | -1 | 17099 | 17584 |
| CEF89526.1 | LN610576_p36 | hypothetical protein | phrog_14060 | unknown function | unknown function | -1 | 15102 | 15293 |
| CEF89623.1 | LN610576_p133 | hypothetical protein | phrog_12189 | unknown function | unknown function | 1 | 76494 | 77042 |
| CEF89613.1 | LN610576_p123 | hypothetical protein | phrog_12479 | unknown function | unknown function | 1 | 72525 | 72845 |
| CEF89569.1 | LN610576_p79 | hypothetical protein | phrog_587 | structural protein | head and packaging | 1 | 45310 | 46074 |
| CEF89537.1 | LN610576_p47 | hypothetical protein | phrog_14132 | unknown function | unknown function | -1 | 21544 | 21981 |
| CEF89579.1 | LN610576_p89 | hypothetical protein | phrog_12496 | unknown function | unknown function | 1 | 52156 | 52575 |
| CEF89542.1 | LN610576_p52 | hypothetical protein | phrog_13098 | unknown function | unknown function | 1 | 24135 | 24383 |
| CEF89510.1 | LN610576_p20 | hypothetical protein | phrog_343 | unknown function | unknown function | 1 | 9870 | 10151 |
| CEF89573.1 | LN610576_p83 | peptidoglycan hydrolase, endolysin | phrog_2860 | endolysin | head and packaging | 1 | 50072 | 50635 |
| CEF89586.1 | LN610576_p96 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 55185 | 57137 |
| CEF89634.1 | LN610576_p144 | hypothetical protein | phrog_4273 | unknown function | unknown function | 1 | 80687 | 81202 |
| CEF89546.1 | LN610576_p56 | terminase, large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 27168 | 28586 |
| CEF89533.1 | LN610576_p43 | hypothetical protein | phrog_2686 | unknown function | unknown function | -1 | 19012 | 19512 |
| CEF89594.1 | LN610576_p104 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 62138 | 63226 |
| CEF89617.1 | LN610576_p127 | hypothetical protein | phrog_11927 | unknown function | unknown function | 1 | 74210 | 74422 |
| CEF89547.1 | LN610576_p57 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 28596 | 30089 |
| CEF89502.1 | LN610576_p12 | hypothetical protein | phrog_2614 | unknown function | unknown function | 1 | 5424 | 5663 |
| CEF89501.1 | LN610576_p11 | hypothetical protein | phrog_10312 | unknown function | unknown function | 1 | 5138 | 5362 |
| CEF89522.1 | LN610576_p32 | hypothetical protein | phrog_10673 | unknown function | unknown function | -1 | 13903 | 14139 |
| CEF89624.1 | LN610576_p134 | hypothetical protein | phrog_9396 | unknown function | unknown function | 1 | 77123 | 77521 |
| CEF89621.1 | LN610576_p131 | hypothetical protein | singleton | unknown function | unknown function | 1 | 75681 | 76121 |
| CEF89588.1 | LN610576_p98 | hypothetical protein | phrog_12101 | unknown function | unknown function | 1 | 59832 | 60038 |
| CEF89535.1 | LN610576_p45 | hypothetical protein | phrog_5276 | unknown function | unknown function | -1 | 20856 | 21128 |
| CEF89597.1 | LN610576_p107 | hypothetical protein | phrog_1985 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63545 | 64108 |
| CEF89560.1 | LN610576_p70 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 37749 | 38135 |
| CEF89568.1 | LN610576_p78 | baseplate protein | phrog_6 | baseplate wedge subunit | tail | 1 | 43842 | 45308 |
| CEF89497.1 | LN610576_p7 | hypothetical protein | phrog_3483 | unknown function | unknown function | 1 | 2856 | 3758 |
| CEF89556.1 | LN610576_p66 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 34822 | 36144 |
| CEF89511.1 | LN610576_p21 | hypothetical protein | phrog_21431 | unknown function | unknown function | 1 | 10148 | 10357 |
| CEF89536.1 | LN610576_p46 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 21131 | 21520 |
| CEF89564.1 | LN610576_p74 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 41467 | 41832 |
| CEF89550.1 | LN610576_p60 | hypothetical protein | phrog_49 | head decoration | head and packaging | 1 | 31404 | 31778 |
| CEF89491.1 | LN610576_p1 | hypothetical protein | phrog_11252 | unknown function | unknown function | -1 | 169 | 318 |
| CEF89561.1 | LN610576_p71 | hypothetical protein | phrog_4625 | unknown function | unknown function | 1 | 38156 | 38377 |
| CEF89629.1 | LN610576_p139 | hypothetical protein | phrog_13058 | unknown function | unknown function | 1 | 78816 | 79079 |
| CEF89639.1 | LN610576_p149 | hypothetical protein | phrog_11252 | unknown function | unknown function | -1 | 82996 | 83145 |
| CEF89638.1 | LN610576_p148 | hypothetical protein | phrog_4686 | unknown function | unknown function | 1 | 82238 | 82456 |
| CEF89593.1 | LN610576_p103 | hypothetical protein | phrog_7029 | unknown function | unknown function | 1 | 61872 | 62138 |
| CEF89631.1 | LN610576_p141 | hypothetical protein | phrog_12054 | unknown function | unknown function | 1 | 79317 | 79595 |
| CEF89523.1 | LN610576_p33 | hypothetical protein | phrog_10306 | unknown function | unknown function | -1 | 14136 | 14471 |
| CEF89499.1 | LN610576_p9 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 4108 | 4788 |
| CEF89630.1 | LN610576_p140 | hypothetical protein | phrog_4025 | unknown function | unknown function | 1 | 79079 | 79315 |
| CEF89616.1 | LN610576_p126 | hypothetical protein | phrog_12731 | unknown function | unknown function | 1 | 73559 | 74038 |
| CEF89534.1 | LN610576_p44 | ATP-dependent polynucleotide ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 19572 | 20843 |
| CEF89513.1 | LN610576_p23 | hypothetical protein | phrog_3230 | unknown function | unknown function | 1 | 10811 | 11311 |
| CEF89493.1 | LN610576_p3 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 1474 | 1815 |
| CEF89622.1 | LN610576_p132 | hypothetical protein | phrog_13123 | unknown function | unknown function | 1 | 76215 | 76418 |
| CEF89567.1 | LN610576_p77 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 43476 | 43841 |
| CEF89637.1 | LN610576_p147 | hypothetical protein | phrog_11866 | unknown function | unknown function | 1 | 82030 | 82248 |
| CEF89604.1 | LN610576_p114 | Ribonucleotide reductase of class Ia | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 67209 | 69065 |
| CEF89584.1 | LN610576_p94 | hypothetical protein | phrog_12927 | unknown function | unknown function | 1 | 54334 | 54870 |
| CEF89545.1 | LN610576_p55 | tail fiber protein | phrog_1954 | virion structural protein | head and packaging | 1 | 26661 | 27086 |
| CEF89548.1 | LN610576_p58 | hypothetical protein | phrog_1530 | DNA methyltransferase | other | 1 | 30091 | 30507 |
| CEF89589.1 | LN610576_p99 | hypothetical protein | phrog_12310 | unknown function | unknown function | 1 | 60185 | 60370 |
| CEF89575.1 | LN610576_p85 | hypothetical protein | phrog_4349 | Rz-like spanin | lysis | 1 | 50879 | 51295 |
| CEF89565.1 | LN610576_p75 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 41833 | 42714 |
| CEF89601.1 | LN610576_p111 | 3'-phosphatase, 5'-polynucleotide kinase | phrog_4521 | unknown function | unknown function | 1 | 65522 | 65935 |
| CEF89504.1 | LN610576_p14 | hypothetical protein | phrog_3956 | unknown function | unknown function | 1 | 6370 | 7977 |
| CEF89633.1 | LN610576_p143 | hypothetical protein | phrog_11104 | unknown function | unknown function | 1 | 80068 | 80610 |
| CEF89518.1 | LN610576_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12477 | 12788 |
| CEF89615.1 | LN610576_p125 | hypothetical protein | phrog_11943 | unknown function | unknown function | 1 | 73065 | 73562 |
| CEF89620.1 | LN610576_p130 | hypothetical protein | phrog_5289 | unknown function | unknown function | 1 | 75395 | 75628 |
| CEF89577.1 | LN610576_p87 | hypothetical protein | phrog_4172 | unknown function | unknown function | 1 | 51445 | 51744 |
| CEF89625.1 | LN610576_p135 | hypothetical protein | phrog_12145 | unknown function | unknown function | 1 | 77588 | 77977 |
| CEF89494.1 | LN610576_p4 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 1805 | 2179 |
| CEF89628.1 | LN610576_p138 | hypothetical protein | phrog_12567 | unknown function | unknown function | 1 | 78416 | 78727 |
| CEF89538.1 | LN610576_p48 | hypothetical protein | phrog_3948 | unknown function | unknown function | -1 | 21990 | 22256 |
| CEF89627.1 | LN610576_p137 | hypothetical protein | phrog_13320 | unknown function | unknown function | 1 | 78216 | 78350 |
| CEF89632.1 | LN610576_p142 | hypothetical protein | phrog_6091 | unknown function | unknown function | 1 | 79795 | 79992 |
| CEF89595.1 | LN610576_p105 | hypothetical protein | phrog_519 | unknown function | unknown function | 1 | 63214 | 63375 |
| CEF89532.1 | LN610576_p42 | cell wall hydrolase | phrog_938 | endolysin | lysis | -1 | 18396 | 18959 |
| CEF89505.1 | LN610576_p15 | hypothetical protein | phrog_3592 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | 1 | 7970 | 8458 |
| CEF89552.1 | LN610576_p62 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 32898 | 33383 |
| CEF89611.1 | LN610576_p121 | hypothetical protein | phrog_11258 | unknown function | unknown function | 1 | 71807 | 72361 |
| CEF89607.1 | LN610576_p117 | hypothetical protein | phrog_1106 | unknown function | unknown function | 1 | 70562 | 71044 |
| CEF89540.1 | LN610576_p50 | hypothetical protein | phrog_12276 | unknown function | unknown function | -1 | 22762 | 23298 |
| CEF89591.1 | LN610576_p101 | hypothetical protein | phrog_7018 | unknown function | unknown function | 1 | 61390 | 61584 |
| CEF89582.1 | LN610576_p92 | hypothetical protein | phrog_13122 | unknown function | unknown function | 1 | 53726 | 53911 |
| CEF89574.1 | LN610576_p84 | hypothetical protein | phrog_12175 | unknown function | unknown function | 1 | 50616 | 50882 |
| CEF89603.1 | LN610576_p113 | hypothetical protein | phrog_3506 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 66842 | 67216 |
| CEF89539.1 | LN610576_p49 | hypothetical protein | phrog_11910 | unknown function | unknown function | -1 | 22367 | 22765 |
| CEF89554.1 | LN610576_p64 | hypothetical protein | phrog_939 | head protein | head and packaging | 1 | 33828 | 34199 |
| CEF89576.1 | LN610576_p86 | hypothetical protein | phrog_5388 | Rz-like spanin | lysis | 1 | 51252 | 51464 |
| CEF89571.1 | LN610576_p81 | tail fiber assembly protein | phrog_4628 | tail fiber assembly | tail | 1 | 48193 | 48567 |
| CEF89551.1 | LN610576_p61 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 31789 | 32844 |
| CEF89619.1 | LN610576_p129 | hypothetical protein | phrog_6353 | unknown function | unknown function | 1 | 75252 | 75395 |
| CEF89636.1 | LN610576_p146 | hypothetical protein | phrog_6876 | unknown function | unknown function | 1 | 81468 | 81638 |
| CEF89543.1 | LN610576_p53 | hypothetical protein | phrog_11136 | unknown function | unknown function | 1 | 24588 | 24890 |
| CEF89583.1 | LN610576_p93 | hypothetical protein | phrog_13021 | unknown function | unknown function | 1 | 53952 | 54347 |
| CEF89527.1 | LN610576_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15283 | 15486 |
| CEF89618.1 | LN610576_p128 | hypothetical protein | phrog_5201 | unknown function | unknown function | 1 | 74936 | 75235 |
| CEF89503.1 | LN610576_p13 | hypothetical protein | phrog_9984 | unknown function | unknown function | 1 | 5984 | 6373 |
| CEF89496.1 | LN610576_p6 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 2515 | 2859 |
| CEF89515.1 | LN610576_p25 | hypothetical protein | phrog_5604 | unknown function | unknown function | 1 | 11635 | 11784 |
| CEF89590.1 | LN610576_p100 | hypothetical protein | phrog_2544 | unknown function | unknown function | 1 | 60438 | 61331 |
| CEF89516.1 | LN610576_p26 | hypothetical protein | phrog_8602 | unknown function | unknown function | 1 | 11781 | 11990 |
| CEF89500.1 | LN610576_p10 | hypothetical protein | phrog_10655 | unknown function | unknown function | 1 | 4798 | 5145 |
| CEF89525.1 | LN610576_p35 | hypothetical protein | phrog_11756 | unknown function | unknown function | -1 | 14887 | 15093 |
| CEF89609.1 | LN610576_p119 | hypothetical protein | phrog_2251 | unknown function | unknown function | 1 | 71290 | 71520 |
| CEF89559.1 | LN610576_p69 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 37232 | 37735 |
| CEF89610.1 | LN610576_p120 | hypothetical protein | phrog_10949 | unknown function | unknown function | 1 | 71522 | 71755 |
| CEF89541.1 | LN610576_p51 | hypothetical protein | phrog_3900 | unknown function | unknown function | 1 | 23777 | 24133 |
| CEF89612.1 | LN610576_p122 | hypothetical protein | phrog_7860 | unknown function | unknown function | 1 | 72342 | 72515 |
| CEF89562.1 | LN610576_p72 | tail length tape-measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 38367 | 40703 |
| CEF89563.1 | LN610576_p73 | hypothetical protein | phrog_817 | tail fiber protein | tail | 1 | 40700 | 41467 |
| CEF89492.1 | LN610576_p2 | hypothetical protein | phrog_2176 | unknown function | unknown function | 1 | 1054 | 1347 |
| CEF89555.1 | LN610576_p65 | hypothetical protein | phrog_4087 | unknown function | unknown function | 1 | 34199 | 34819 |
| CEF89509.1 | LN610576_p19 | hypothetical protein | phrog_5614 | unknown function | unknown function | 1 | 9382 | 9867 |
| CEF89557.1 | LN610576_p67 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 36155 | 36676 |
| CEF89549.1 | LN610576_p59 | hypothetical protein | phrog_4103 | unknown function | unknown function | 1 | 30500 | 31387 |
| CEF89580.1 | LN610576_p90 | hypothetical protein | phrog_12190 | unknown function | unknown function | 1 | 52599 | 52811 |
| CEF89514.1 | LN610576_p24 | hypothetical protein | phrog_7635 | unknown function | unknown function | 1 | 11394 | 11651 |