Genomic map of Pseudomonas phage vB_PaeP_PAO1_1-15pyo (LN610580)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LN610580
Definition
Pseudomonas phage vB_PaeP_PAO1_1-15pyo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus 15pyo.
DB of origin
PVOG
Length
42750
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
62.18
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CEF89922.1 LN610580_p43 DNA maturase B phrog_17672 terminase large subunit head and packaging 1 39184 40050
CEF89896.1 LN610580_p17 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9727 10344
CEF89882.1 LN610580_p3 hypothetical protein phrog_7124 unknown function unknown function 1 2021 2248
CEF89884.1 LN610580_p5 hypothetical protein phrog_6951 unknown function unknown function 1 3166 3534
CEF89899.1 LN610580_p20 hypothetical protein phrog_5437 unknown function unknown function 1 14049 14351
CEF89904.1 LN610580_p25 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17881 18252
CEF89925.1 LN610580_p46 phage lysozyme phrog_7 endolysin lysis 1 41202 41672
CEF89907.1 LN610580_p28 hypothetical protein phrog_3986 unknown function unknown function 1 21463 21936
CEF89906.1 LN610580_p27 hypothetical protein phrog_6575 unknown function unknown function 1 21212 21463
CEF89917.1 LN610580_p38 hypothetical protein singleton unknown function unknown function 1 35927 36145
CEF89887.1 LN610580_p8 hypothetical protein phrog_4342 unknown function unknown function 1 4085 4399
CEF89883.1 LN610580_p4 hypothetical protein phrog_1448 unknown function unknown function 1 2259 2798
CEF89912.1 LN610580_p33 tail tubular protein A phrog_446 tail protein tail 1 25799 26404
CEF89900.1 LN610580_p21 hypothetical protein phrog_862 unknown function unknown function 1 14348 15457
CEF89918.1 LN610580_p39 tail fiber protein phrog_6953 tail fiber protein tail 1 36225 36902
CEF89916.1 LN610580_p37 internal core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32132 35899
CEF89909.1 LN610580_p30 head-tail connector protein phrog_449 head-tail adaptor connector 1 22174 23721
CEF89881.1 LN610580_p2 hypothetical protein phrog_5722 unknown function unknown function 1 1731 2021
CEF89891.1 LN610580_p12 DNA-binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5809 6678
CEF89898.1 LN610580_p19 exonuclease phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11419 14043
CEF89914.1 LN610580_p35 hypothetical protein phrog_805 internal virion protein head and packaging 1 28809 29432
CEF89886.1 LN610580_p7 hypothetical protein phrog_8496 unknown function unknown function 1 3855 4106
CEF89910.1 LN610580_p31 hypothetical protein phrog_1018 head scaffolding protein head and packaging 1 23725 24693
CEF89894.1 LN610580_p15 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7610 8500
CEF89905.1 LN610580_p26 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18604 21051
CEF89895.1 LN610580_p16 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8469 9737
CEF89908.1 LN610580_p29 hypothetical protein phrog_3112 virion structural protein head and packaging 1 21881 22177
CEF89897.1 LN610580_p18 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10188 11291
CEF89911.1 LN610580_p32 capsid protein phrog_267 major head protein head and packaging 1 24746 25753
CEF89920.1 LN610580_p41 structural protein phrog_4176 tail fiber protein tail 1 37353 38261
CEF89928.1 LN610580_p49 hypothetical protein phrog_7171 minor head protein head and packaging 1 42413 42607
CEF89903.1 LN610580_p24 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16618 17871
CEF89915.1 LN610580_p36 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29429 32128
CEF89921.1 LN610580_p42 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38816 39175
CEF89892.1 LN610580_p13 hypothetical protein phrog_2563 unknown function unknown function 1 6948 7490
CEF89880.1 LN610580_p1 hypothetical protein phrog_21618 unknown function unknown function 1 928 1122
CEF89902.1 LN610580_p23 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16388 16828
CEF89893.1 LN610580_p14 hypothetical protein phrog_23126 unknown function unknown function 1 7500 7703
CEF89924.1 LN610580_p45 hypothetical protein phrog_6597 holin lysis 1 40993 41193
CEF89923.1 LN610580_p44 DNA maturase B phrog_15524 terminase large subunit head and packaging 1 39923 40996
CEF89890.1 LN610580_p11 hypothetical protein phrog_6915 unknown function unknown function 1 5474 5866
CEF89913.1 LN610580_p34 tail tubular protein B phrog_457 tail protein tail 1 26401 28887
CEF89885.1 LN610580_p6 hypothetical protein phrog_7027 unknown function unknown function 1 3377 3748
CEF89926.1 LN610580_p47 hypothetical protein singleton unknown function unknown function 1 41534 41959
CEF89889.1 LN610580_p10 hypothetical protein singleton unknown function unknown function 1 4428 4943
CEF89919.1 LN610580_p40 hypothetical protein phrog_8874 tail fiber protein tail 1 36869 37360
CEF89901.1 LN610580_p22 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15457 16398
CEF89888.1 LN610580_p9 hypothetical protein phrog_4955 unknown function unknown function 1 4333 4632
CEF89927.1 LN610580_p48 minor structural protein phrog_6908 minor head protein head and packaging 1 42049 42363