Genomic map of Escherichia phage slur17 (LN881738)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
LN881738
Definition
Escherichia phage slur17, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
41318
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
30.82
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CUL03839.1 LN881738_p35 hypothetical protein phrog_6407 unknown function unknown function -1 26556 26738
CUL03814.1 LN881738_p10 hypothetical protein phrog_3266 tail completion connector -1 11816 12247
CUL03852.1 LN881738_p48 N-acetylmuramoyl-L-alanine amidase LytC precursor phrog_435 endolysin lysis -1 36746 37552
CUL03824.1 LN881738_p20 Terminase-like family protein phrog_2 terminase large subunit head and packaging -1 18420 19742
CUL03832.1 LN881738_p28 hypothetical protein phrog_3221 unknown function unknown function -1 23922 24095
CUL03847.1 LN881738_p43 hypothetical protein phrog_4021 unknown function unknown function 1 33887 34168
CUL03842.1 LN881738_p38 Type III restriction enzyme, res subunit phrog_5173 unknown function unknown function -1 28472 30658
CUL03817.1 LN881738_p13 hypothetical protein phrog_541 head-tail adaptor connector -1 13034 13366
CUL03809.1 LN881738_p5 hypothetical protein phrog_7974 unknown function unknown function -1 9272 9913
CUL03841.1 LN881738_p37 hypothetical protein phrog_6335 unknown function unknown function -1 28078 28425
CUL03853.1 LN881738_p49 hypothetical protein phrog_4884 holin lysis -1 37553 37816
CUL03838.1 LN881738_p34 hypothetical protein phrog_4206 unknown function unknown function -1 26064 26489
CUL03807.1 LN881738_p3 Phage tail protein phrog_33 distal tail protein Dit tail -1 3008 3763
CUL03825.1 LN881738_p21 hypothetical protein phrog_509 terminase small subunit head and packaging -1 19729 20340
CUL03828.1 LN881738_p24 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 22285 22857
CUL03812.1 LN881738_p8 hypothetical protein phrog_4450 unknown function unknown function -1 10593 10955
CUL03831.1 LN881738_p27 Single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23483 23809
CUL03822.1 LN881738_p18 Phage minor capsid protein 2 phrog_581 minor head protein head and packaging -1 15783 17006
CUL03827.1 LN881738_p23 site-specific tyrosine recombinase XerC phrog_216 integrase integration and excision -1 21499 22107
CUL03821.1 LN881738_p17 hypothetical protein phrog_1233 unknown function unknown function -1 15455 15781
CUL03819.1 LN881738_p15 Phage minor structural protein GP20 phrog_194 head scaffolding protein head and packaging -1 14454 15026
CUL03848.1 LN881738_p44 hypothetical protein phrog_4337 unknown function unknown function -1 34401 34871
CUL03845.1 LN881738_p41 Sporulation initiation inhibitor protein Soj phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 32601 33410
CUL03806.1 LN881738_p2 Prophage endopeptidase tail phrog_8687 tail protein with peptidase activity other -1 879 2678
CUL03811.1 LN881738_p7 Bacteriophageprotein phrog_706 unknown function unknown function -1 9985 10593
CUL03829.1 LN881738_p25 hypothetical protein phrog_7197 unknown function unknown function -1 22869 23042
CUL03850.1 LN881738_p46 hypothetical protein phrog_6775 unknown function unknown function -1 35476 36306
CUL03820.1 LN881738_p16 hypothetical protein phrog_419 unknown function unknown function -1 15158 15439
CUL03815.1 LN881738_p11 Minor capsid protein phrog_556 minor head protein head and packaging -1 12244 12591
CUL03854.1 LN881738_p50 hypothetical protein phrog_7809 tail fiber protein tail -1 37902 39752
CUL03851.1 LN881738_p47 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 36485 36697
CUL03843.1 LN881738_p39 hypothetical protein phrog_738 unknown function unknown function 1 31157 31309
CUL03816.1 LN881738_p12 hypothetical protein phrog_3366 unknown function unknown function -1 12598 13032
CUL03837.1 LN881738_p33 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism -1 25585 25989
CUL03846.1 LN881738_p42 hypothetical protein phrog_4741 unknown function unknown function 1 33411 33743
CUL03823.1 LN881738_p19 Phage portal protein, SPP1 Gp6-like phrog_533 portal protein head and packaging -1 17007 18419
CUL03836.1 LN881738_p32 hypothetical protein phrog_1029 unknown function unknown function -1 24849 25562
CUL03818.1 LN881738_p14 hypothetical protein phrog_247 major head protein head and packaging -1 13370 14443
CUL03849.1 LN881738_p45 hypothetical protein phrog_6809 unknown function unknown function -1 34891 35397
CUL03855.1 LN881738_p51 hypothetical protein phrog_9525 tail fiber protein tail -1 39752 41218
CUL03833.1 LN881738_p29 hypothetical protein phrog_2569 unknown function unknown function -1 24126 24275
CUL03805.1 LN881738_p1 hypothetical protein phrog_6130 unknown function unknown function -1 610 852
CUL03813.1 LN881738_p9 hypothetical protein phrog_3099 unknown function unknown function -1 11013 11813
CUL03834.1 LN881738_p30 hypothetical protein phrog_5442 unknown function unknown function -1 24321 24632
CUL03810.1 LN881738_p6 hypothetical protein singleton unknown function unknown function -1 9903 10013
CUL03830.1 LN881738_p26 hypothetical protein phrog_1310 unknown function unknown function -1 23026 23391
CUL03835.1 LN881738_p31 hypothetical protein phrog_2065 unknown function unknown function -1 24629 24772
CUL03840.1 LN881738_p36 helix-turn-helix protein phrog_8 transcriptional regulator transcription regulation 1 26911 27264
CUL03826.1 LN881738_p22 DNA-invertase from lambdoid prophage Rac phrog_125 DNA invertase DNA, RNA and nucleotide metabolism -1 20465 21061
CUL03844.1 LN881738_p40 hypothetical protein phrog_2329 unknown function unknown function 1 32130 32312
CUL03808.1 LN881738_p4 Phage-related minor tail protein phrog_1272 tail length tape measure protein tail -1 3863 9166