| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
LN881738 |
Definition |
Escherichia phage slur17, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
41318 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
30.82 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| CUL03839.1 | LN881738_p35 | hypothetical protein | phrog_6407 | unknown function | unknown function | -1 | 26556 | 26738 |
| CUL03814.1 | LN881738_p10 | hypothetical protein | phrog_3266 | tail completion | connector | -1 | 11816 | 12247 |
| CUL03852.1 | LN881738_p48 | N-acetylmuramoyl-L-alanine amidase LytC precursor | phrog_435 | endolysin | lysis | -1 | 36746 | 37552 |
| CUL03824.1 | LN881738_p20 | Terminase-like family protein | phrog_2 | terminase large subunit | head and packaging | -1 | 18420 | 19742 |
| CUL03832.1 | LN881738_p28 | hypothetical protein | phrog_3221 | unknown function | unknown function | -1 | 23922 | 24095 |
| CUL03847.1 | LN881738_p43 | hypothetical protein | phrog_4021 | unknown function | unknown function | 1 | 33887 | 34168 |
| CUL03842.1 | LN881738_p38 | Type III restriction enzyme, res subunit | phrog_5173 | unknown function | unknown function | -1 | 28472 | 30658 |
| CUL03817.1 | LN881738_p13 | hypothetical protein | phrog_541 | head-tail adaptor | connector | -1 | 13034 | 13366 |
| CUL03809.1 | LN881738_p5 | hypothetical protein | phrog_7974 | unknown function | unknown function | -1 | 9272 | 9913 |
| CUL03841.1 | LN881738_p37 | hypothetical protein | phrog_6335 | unknown function | unknown function | -1 | 28078 | 28425 |
| CUL03853.1 | LN881738_p49 | hypothetical protein | phrog_4884 | holin | lysis | -1 | 37553 | 37816 |
| CUL03838.1 | LN881738_p34 | hypothetical protein | phrog_4206 | unknown function | unknown function | -1 | 26064 | 26489 |
| CUL03807.1 | LN881738_p3 | Phage tail protein | phrog_33 | distal tail protein Dit | tail | -1 | 3008 | 3763 |
| CUL03825.1 | LN881738_p21 | hypothetical protein | phrog_509 | terminase small subunit | head and packaging | -1 | 19729 | 20340 |
| CUL03828.1 | LN881738_p24 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 22285 | 22857 |
| CUL03812.1 | LN881738_p8 | hypothetical protein | phrog_4450 | unknown function | unknown function | -1 | 10593 | 10955 |
| CUL03831.1 | LN881738_p27 | Single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23483 | 23809 |
| CUL03822.1 | LN881738_p18 | Phage minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | -1 | 15783 | 17006 |
| CUL03827.1 | LN881738_p23 | site-specific tyrosine recombinase XerC | phrog_216 | integrase | integration and excision | -1 | 21499 | 22107 |
| CUL03821.1 | LN881738_p17 | hypothetical protein | phrog_1233 | unknown function | unknown function | -1 | 15455 | 15781 |
| CUL03819.1 | LN881738_p15 | Phage minor structural protein GP20 | phrog_194 | head scaffolding protein | head and packaging | -1 | 14454 | 15026 |
| CUL03848.1 | LN881738_p44 | hypothetical protein | phrog_4337 | unknown function | unknown function | -1 | 34401 | 34871 |
| CUL03845.1 | LN881738_p41 | Sporulation initiation inhibitor protein Soj | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 32601 | 33410 |
| CUL03806.1 | LN881738_p2 | Prophage endopeptidase tail | phrog_8687 | tail protein with peptidase activity | other | -1 | 879 | 2678 |
| CUL03811.1 | LN881738_p7 | Bacteriophageprotein | phrog_706 | unknown function | unknown function | -1 | 9985 | 10593 |
| CUL03829.1 | LN881738_p25 | hypothetical protein | phrog_7197 | unknown function | unknown function | -1 | 22869 | 23042 |
| CUL03850.1 | LN881738_p46 | hypothetical protein | phrog_6775 | unknown function | unknown function | -1 | 35476 | 36306 |
| CUL03820.1 | LN881738_p16 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 15158 | 15439 |
| CUL03815.1 | LN881738_p11 | Minor capsid protein | phrog_556 | minor head protein | head and packaging | -1 | 12244 | 12591 |
| CUL03854.1 | LN881738_p50 | hypothetical protein | phrog_7809 | tail fiber protein | tail | -1 | 37902 | 39752 |
| CUL03851.1 | LN881738_p47 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 36485 | 36697 |
| CUL03843.1 | LN881738_p39 | hypothetical protein | phrog_738 | unknown function | unknown function | 1 | 31157 | 31309 |
| CUL03816.1 | LN881738_p12 | hypothetical protein | phrog_3366 | unknown function | unknown function | -1 | 12598 | 13032 |
| CUL03837.1 | LN881738_p33 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | -1 | 25585 | 25989 |
| CUL03846.1 | LN881738_p42 | hypothetical protein | phrog_4741 | unknown function | unknown function | 1 | 33411 | 33743 |
| CUL03823.1 | LN881738_p19 | Phage portal protein, SPP1 Gp6-like | phrog_533 | portal protein | head and packaging | -1 | 17007 | 18419 |
| CUL03836.1 | LN881738_p32 | hypothetical protein | phrog_1029 | unknown function | unknown function | -1 | 24849 | 25562 |
| CUL03818.1 | LN881738_p14 | hypothetical protein | phrog_247 | major head protein | head and packaging | -1 | 13370 | 14443 |
| CUL03849.1 | LN881738_p45 | hypothetical protein | phrog_6809 | unknown function | unknown function | -1 | 34891 | 35397 |
| CUL03855.1 | LN881738_p51 | hypothetical protein | phrog_9525 | tail fiber protein | tail | -1 | 39752 | 41218 |
| CUL03833.1 | LN881738_p29 | hypothetical protein | phrog_2569 | unknown function | unknown function | -1 | 24126 | 24275 |
| CUL03805.1 | LN881738_p1 | hypothetical protein | phrog_6130 | unknown function | unknown function | -1 | 610 | 852 |
| CUL03813.1 | LN881738_p9 | hypothetical protein | phrog_3099 | unknown function | unknown function | -1 | 11013 | 11813 |
| CUL03834.1 | LN881738_p30 | hypothetical protein | phrog_5442 | unknown function | unknown function | -1 | 24321 | 24632 |
| CUL03810.1 | LN881738_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9903 | 10013 |
| CUL03830.1 | LN881738_p26 | hypothetical protein | phrog_1310 | unknown function | unknown function | -1 | 23026 | 23391 |
| CUL03835.1 | LN881738_p31 | hypothetical protein | phrog_2065 | unknown function | unknown function | -1 | 24629 | 24772 |
| CUL03840.1 | LN881738_p36 | helix-turn-helix protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 26911 | 27264 |
| CUL03826.1 | LN881738_p22 | DNA-invertase from lambdoid prophage Rac | phrog_125 | DNA invertase | DNA, RNA and nucleotide metabolism | -1 | 20465 | 21061 |
| CUL03844.1 | LN881738_p40 | hypothetical protein | phrog_2329 | unknown function | unknown function | 1 | 32130 | 32312 |
| CUL03808.1 | LN881738_p4 | Phage-related minor tail protein | phrog_1272 | tail length tape measure protein | tail | -1 | 3863 | 9166 |