Genomic map of Clostridium phage CP3 (MF001357)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF001357
Definition
Clostridium phage CP3, partial genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
NUCCORE
Length
52068
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
34.01
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ76645.1 MF001357_p53 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 37837 38802
ASZ76626.1 MF001357_p34 hypothetical protein phrog_521 tail protein tail 1 23218 23805
ASZ76602.1 MF001357_p10 hypothetical protein singleton unknown function unknown function 1 4221 4406
ASZ76607.1 MF001357_p15 hypothetical protein phrog_2468 head morphogenesis head and packaging 1 9485 10369
ASZ76627.1 MF001357_p35 tail fiber protein phrog_33092 unknown function unknown function 1 23820 26786
ASZ76619.1 MF001357_p27 hypothetical protein phrog_10943 unknown function unknown function 1 17099 17239
ASZ76605.1 MF001357_p13 terminase large subunit phrog_2 terminase large subunit head and packaging 1 6055 7509
ASZ76658.1 MF001357_p66 chaperone protein phrog_2250 unknown function unknown function -1 48106 48702
ASZ76613.1 MF001357_p21 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13671 14204
ASZ76647.1 MF001357_p55 hypothetical protein singleton unknown function unknown function 1 41343 41573
ASZ76610.1 MF001357_p18 hypothetical protein phrog_37962 unknown function unknown function 1 12607 12897
ASZ76657.1 MF001357_p65 hypothetical protein phrog_30580 unknown function unknown function -1 47764 48021
ASZ76628.1 MF001357_p36 hypothetical protein phrog_29856 unknown function unknown function 1 26802 27395
ASZ76615.1 MF001357_p23 hypothetical protein phrog_1939 unknown function unknown function 1 14638 14811
ASZ76642.1 MF001357_p50 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 35670 35999
ASZ76666.1 MF001357_p74 hypothetical protein singleton unknown function unknown function -1 51777 52068
ASZ76640.1 MF001357_p48 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 33732 35183
ASZ76650.1 MF001357_p58 hypothetical protein phrog_34294 unknown function unknown function -1 42662 43411
ASZ76623.1 MF001357_p31 hypothetical protein phrog_579 unknown function unknown function 1 21501 21755
ASZ76603.1 MF001357_p11 hypothetical protein phrog_33402 unknown function unknown function 1 4399 5016
ASZ76630.1 MF001357_p38 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 27562 27774
ASZ76663.1 MF001357_p71 hypothetical protein phrog_6466 DNA ligase DNA, RNA and nucleotide metabolism -1 50691 51050
ASZ76609.1 MF001357_p17 hypothetical protein phrog_1623 virion structural protein head and packaging 1 11665 12585
ASZ76597.1 MF001357_p5 hypothetical protein singleton unknown function unknown function 1 2329 2616
ASZ76655.1 MF001357_p63 hypothetical protein phrog_28450 unknown function unknown function -1 45251 45778
ASZ76651.1 MF001357_p59 hypothetical protein phrog_12184 nucleotide pyrophosphohydrolase other -1 43436 44080
ASZ76600.1 MF001357_p8 hypothetical protein singleton unknown function unknown function 1 3336 3752
ASZ76644.1 MF001357_p52 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 37005 37868
ASZ76624.1 MF001357_p32 hypothetical protein phrog_120 baseplate wedge subunit tail 1 21760 22167
ASZ76614.1 MF001357_p22 hypothetical protein phrog_5756 unknown function unknown function 1 14204 14638
ASZ76629.1 MF001357_p37 hypothetical protein phrog_134 unknown function unknown function 1 27409 27558
ASZ76641.1 MF001357_p49 hypothetical protein singleton unknown function unknown function -1 35216 35509
ASZ76611.1 MF001357_p19 hypothetical protein phrog_4931 head-tail adaptor connector 1 12909 13304
ASZ76653.1 MF001357_p61 hypothetical protein phrog_37003 unknown function unknown function -1 44628 44957
ASZ76604.1 MF001357_p12 hypothetical protein phrog_2606 terminase small subunit head and packaging 1 5168 6004
ASZ76646.1 MF001357_p54 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 38846 41287
ASZ76635.1 MF001357_p43 hypothetical protein phrog_26256 unknown function unknown function -1 31545 31772
ASZ76606.1 MF001357_p14 hypothetical protein phrog_12 portal protein head and packaging 1 7956 9482
ASZ76660.1 MF001357_p68 hypothetical protein phrog_37723 unknown function unknown function -1 49512 49784
ASZ76639.1 MF001357_p47 hypothetical protein phrog_29569 unknown function unknown function -1 33249 33701
ASZ76598.1 MF001357_p6 hypothetical protein singleton unknown function unknown function 1 2889 3101
ASZ76654.1 MF001357_p62 hypothetical protein phrog_31685 unknown function unknown function -1 44995 45120
ASZ76665.1 MF001357_p73 hypothetical protein phrog_36214 unknown function unknown function -1 51453 51665
ASZ76643.1 MF001357_p51 hypothetical protein phrog_3724 unknown function unknown function -1 36065 36874
ASZ76625.1 MF001357_p33 hypothetical protein phrog_6 baseplate wedge subunit tail 1 22167 23225
ASZ76618.1 MF001357_p26 hypothetical protein phrog_389 tail protein XkdN-like tail 1 16620 17066
ASZ76612.1 MF001357_p20 hypothetical protein phrog_7072 head-tail adaptor connector 1 13306 13668
ASZ76617.1 MF001357_p25 hypothetical protein phrog_365 tail protein tail 1 16157 16588
ASZ76652.1 MF001357_p60 hypothetical protein phrog_761 thymidylate kinase other -1 44095 44628
ASZ76595.1 MF001357_p3 hypothetical protein singleton unknown function unknown function 1 1368 1946
ASZ76637.1 MF001357_p45 hypothetical protein singleton unknown function unknown function -1 32229 32432
ASZ76596.1 MF001357_p4 hypothetical protein singleton unknown function unknown function 1 2037 2246
ASZ76664.1 MF001357_p72 hypothetical protein singleton unknown function unknown function -1 51236 51406
ASZ76593.1 MF001357_p1 hypothetical protein singleton unknown function unknown function -1 59 403
ASZ76648.1 MF001357_p56 hypothetical protein phrog_4072 unknown function unknown function -1 41662 41853
ASZ76656.1 MF001357_p64 hypothetical protein phrog_3123 unknown function unknown function -1 45775 47748
ASZ76633.1 MF001357_p41 hypothetical protein phrog_33386 unknown function unknown function -1 29433 30779
ASZ76634.1 MF001357_p42 hypothetical protein phrog_36397 unknown function unknown function -1 30860 31450
ASZ76594.1 MF001357_p2 hypothetical protein phrog_32052 unknown function unknown function 1 713 1375
ASZ76622.1 MF001357_p30 hypothetical protein phrog_400 tail protein tail 1 20515 21501
ASZ76638.1 MF001357_p46 hypothetical protein phrog_5594 unknown function unknown function -1 32713 33153
ASZ76616.1 MF001357_p24 hypothetical protein phrog_279 tail sheath tail 1 14812 16143
ASZ76649.1 MF001357_p57 hypothetical protein phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 41857 42618
ASZ76659.1 MF001357_p67 thymidine kinase phrog_592 thymidine kinase other -1 48843 49430
ASZ76621.1 MF001357_p29 hypothetical protein phrog_380 endolysin lysis 1 19812 20513
ASZ76599.1 MF001357_p7 hypothetical protein singleton unknown function unknown function 1 3107 3292
ASZ76662.1 MF001357_p70 hypothetical protein phrog_3458 unknown function unknown function -1 50488 50694
ASZ76636.1 MF001357_p44 hypothetical protein phrog_28662 unknown function unknown function -1 31900 32118
ASZ76608.1 MF001357_p16 hypothetical protein phrog_3017 head maturation protease head and packaging 1 10384 11643
ASZ76661.1 MF001357_p69 hypothetical protein phrog_5889 unknown function unknown function -1 49934 50476
ASZ76601.1 MF001357_p9 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 3809 4228
ASZ76632.1 MF001357_p40 hypothetical protein phrog_1129 holin lysis 1 29088 29411
ASZ76620.1 MF001357_p28 tail length tape-measure protein phrog_991 tail length tape measure protein tail 1 17258 19819
ASZ76631.1 MF001357_p39 N-acetylmuramoyl-L-alanine amidase phrog_1794 amidase lysis 1 27909 29075