| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF001357 |
Definition |
Clostridium phage CP3, partial genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
NUCCORE |
Length |
52068 |
Host Name |
Clostridium perfringens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
34.01 |
Number of singletons |
13 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ76645.1 | MF001357_p53 | hypothetical protein | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 37837 | 38802 |
| ASZ76626.1 | MF001357_p34 | hypothetical protein | phrog_521 | tail protein | tail | 1 | 23218 | 23805 |
| ASZ76602.1 | MF001357_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4221 | 4406 |
| ASZ76607.1 | MF001357_p15 | hypothetical protein | phrog_2468 | head morphogenesis | head and packaging | 1 | 9485 | 10369 |
| ASZ76627.1 | MF001357_p35 | tail fiber protein | phrog_33092 | unknown function | unknown function | 1 | 23820 | 26786 |
| ASZ76619.1 | MF001357_p27 | hypothetical protein | phrog_10943 | unknown function | unknown function | 1 | 17099 | 17239 |
| ASZ76605.1 | MF001357_p13 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 6055 | 7509 |
| ASZ76658.1 | MF001357_p66 | chaperone protein | phrog_2250 | unknown function | unknown function | -1 | 48106 | 48702 |
| ASZ76613.1 | MF001357_p21 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 13671 | 14204 |
| ASZ76647.1 | MF001357_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41343 | 41573 |
| ASZ76610.1 | MF001357_p18 | hypothetical protein | phrog_37962 | unknown function | unknown function | 1 | 12607 | 12897 |
| ASZ76657.1 | MF001357_p65 | hypothetical protein | phrog_30580 | unknown function | unknown function | -1 | 47764 | 48021 |
| ASZ76628.1 | MF001357_p36 | hypothetical protein | phrog_29856 | unknown function | unknown function | 1 | 26802 | 27395 |
| ASZ76615.1 | MF001357_p23 | hypothetical protein | phrog_1939 | unknown function | unknown function | 1 | 14638 | 14811 |
| ASZ76642.1 | MF001357_p50 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35670 | 35999 |
| ASZ76666.1 | MF001357_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51777 | 52068 |
| ASZ76640.1 | MF001357_p48 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 33732 | 35183 |
| ASZ76650.1 | MF001357_p58 | hypothetical protein | phrog_34294 | unknown function | unknown function | -1 | 42662 | 43411 |
| ASZ76623.1 | MF001357_p31 | hypothetical protein | phrog_579 | unknown function | unknown function | 1 | 21501 | 21755 |
| ASZ76603.1 | MF001357_p11 | hypothetical protein | phrog_33402 | unknown function | unknown function | 1 | 4399 | 5016 |
| ASZ76630.1 | MF001357_p38 | bacteriocin-like protein | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 27562 | 27774 |
| ASZ76663.1 | MF001357_p71 | hypothetical protein | phrog_6466 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 50691 | 51050 |
| ASZ76609.1 | MF001357_p17 | hypothetical protein | phrog_1623 | virion structural protein | head and packaging | 1 | 11665 | 12585 |
| ASZ76597.1 | MF001357_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2329 | 2616 |
| ASZ76655.1 | MF001357_p63 | hypothetical protein | phrog_28450 | unknown function | unknown function | -1 | 45251 | 45778 |
| ASZ76651.1 | MF001357_p59 | hypothetical protein | phrog_12184 | nucleotide pyrophosphohydrolase | other | -1 | 43436 | 44080 |
| ASZ76600.1 | MF001357_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3336 | 3752 |
| ASZ76644.1 | MF001357_p52 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 37005 | 37868 |
| ASZ76624.1 | MF001357_p32 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 21760 | 22167 |
| ASZ76614.1 | MF001357_p22 | hypothetical protein | phrog_5756 | unknown function | unknown function | 1 | 14204 | 14638 |
| ASZ76629.1 | MF001357_p37 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 27409 | 27558 |
| ASZ76641.1 | MF001357_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35216 | 35509 |
| ASZ76611.1 | MF001357_p19 | hypothetical protein | phrog_4931 | head-tail adaptor | connector | 1 | 12909 | 13304 |
| ASZ76653.1 | MF001357_p61 | hypothetical protein | phrog_37003 | unknown function | unknown function | -1 | 44628 | 44957 |
| ASZ76604.1 | MF001357_p12 | hypothetical protein | phrog_2606 | terminase small subunit | head and packaging | 1 | 5168 | 6004 |
| ASZ76646.1 | MF001357_p54 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 38846 | 41287 |
| ASZ76635.1 | MF001357_p43 | hypothetical protein | phrog_26256 | unknown function | unknown function | -1 | 31545 | 31772 |
| ASZ76606.1 | MF001357_p14 | hypothetical protein | phrog_12 | portal protein | head and packaging | 1 | 7956 | 9482 |
| ASZ76660.1 | MF001357_p68 | hypothetical protein | phrog_37723 | unknown function | unknown function | -1 | 49512 | 49784 |
| ASZ76639.1 | MF001357_p47 | hypothetical protein | phrog_29569 | unknown function | unknown function | -1 | 33249 | 33701 |
| ASZ76598.1 | MF001357_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2889 | 3101 |
| ASZ76654.1 | MF001357_p62 | hypothetical protein | phrog_31685 | unknown function | unknown function | -1 | 44995 | 45120 |
| ASZ76665.1 | MF001357_p73 | hypothetical protein | phrog_36214 | unknown function | unknown function | -1 | 51453 | 51665 |
| ASZ76643.1 | MF001357_p51 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 36065 | 36874 |
| ASZ76625.1 | MF001357_p33 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 22167 | 23225 |
| ASZ76618.1 | MF001357_p26 | hypothetical protein | phrog_389 | tail protein XkdN-like | tail | 1 | 16620 | 17066 |
| ASZ76612.1 | MF001357_p20 | hypothetical protein | phrog_7072 | head-tail adaptor | connector | 1 | 13306 | 13668 |
| ASZ76617.1 | MF001357_p25 | hypothetical protein | phrog_365 | tail protein | tail | 1 | 16157 | 16588 |
| ASZ76652.1 | MF001357_p60 | hypothetical protein | phrog_761 | thymidylate kinase | other | -1 | 44095 | 44628 |
| ASZ76595.1 | MF001357_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1368 | 1946 |
| ASZ76637.1 | MF001357_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32229 | 32432 |
| ASZ76596.1 | MF001357_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2037 | 2246 |
| ASZ76664.1 | MF001357_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51236 | 51406 |
| ASZ76593.1 | MF001357_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59 | 403 |
| ASZ76648.1 | MF001357_p56 | hypothetical protein | phrog_4072 | unknown function | unknown function | -1 | 41662 | 41853 |
| ASZ76656.1 | MF001357_p64 | hypothetical protein | phrog_3123 | unknown function | unknown function | -1 | 45775 | 47748 |
| ASZ76633.1 | MF001357_p41 | hypothetical protein | phrog_33386 | unknown function | unknown function | -1 | 29433 | 30779 |
| ASZ76634.1 | MF001357_p42 | hypothetical protein | phrog_36397 | unknown function | unknown function | -1 | 30860 | 31450 |
| ASZ76594.1 | MF001357_p2 | hypothetical protein | phrog_32052 | unknown function | unknown function | 1 | 713 | 1375 |
| ASZ76622.1 | MF001357_p30 | hypothetical protein | phrog_400 | tail protein | tail | 1 | 20515 | 21501 |
| ASZ76638.1 | MF001357_p46 | hypothetical protein | phrog_5594 | unknown function | unknown function | -1 | 32713 | 33153 |
| ASZ76616.1 | MF001357_p24 | hypothetical protein | phrog_279 | tail sheath | tail | 1 | 14812 | 16143 |
| ASZ76649.1 | MF001357_p57 | hypothetical protein | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 41857 | 42618 |
| ASZ76659.1 | MF001357_p67 | thymidine kinase | phrog_592 | thymidine kinase | other | -1 | 48843 | 49430 |
| ASZ76621.1 | MF001357_p29 | hypothetical protein | phrog_380 | endolysin | lysis | 1 | 19812 | 20513 |
| ASZ76599.1 | MF001357_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3107 | 3292 |
| ASZ76662.1 | MF001357_p70 | hypothetical protein | phrog_3458 | unknown function | unknown function | -1 | 50488 | 50694 |
| ASZ76636.1 | MF001357_p44 | hypothetical protein | phrog_28662 | unknown function | unknown function | -1 | 31900 | 32118 |
| ASZ76608.1 | MF001357_p16 | hypothetical protein | phrog_3017 | head maturation protease | head and packaging | 1 | 10384 | 11643 |
| ASZ76661.1 | MF001357_p69 | hypothetical protein | phrog_5889 | unknown function | unknown function | -1 | 49934 | 50476 |
| ASZ76601.1 | MF001357_p9 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 3809 | 4228 |
| ASZ76632.1 | MF001357_p40 | hypothetical protein | phrog_1129 | holin | lysis | 1 | 29088 | 29411 |
| ASZ76620.1 | MF001357_p28 | tail length tape-measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 17258 | 19819 |
| ASZ76631.1 | MF001357_p39 | N-acetylmuramoyl-L-alanine amidase | phrog_1794 | amidase | lysis | 1 | 27909 | 29075 |