Genomic map of Salmonella phage SH9 (MF001363)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF001363
Definition
Salmonella phage SH9, partial genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus; Salmonella virus SH9.
DB of origin
NUCCORE
Length
111607
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
160
%GC
40.14
Number of singletons
5
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ77839.1 MF001363_p87 hypothetical protein phrog_4593 unknown function unknown function 1 73565 73843
ASZ77861.1 MF001363_p109 hypothetical protein phrog_8408 unknown function unknown function 1 85710 85934
ASZ77852.1 MF001363_p100 ribosylnicotinamide kinase phrog_3462 nicotinamide-nucleotide adenylyltransferase moron, auxiliary metabolic gene and host takeover 1 81121 82176
ASZ77838.1 MF001363_p86 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 73012 73488
ASZ77836.1 MF001363_p84 hypothetical protein phrog_17630 unknown function unknown function 1 72489 72743
ASZ77850.1 MF001363_p98 hypothetical protein phrog_11609 unknown function unknown function 1 79702 79902
ASZ77881.1 MF001363_p129 hypothetical protein phrog_5468 unknown function unknown function 1 95551 95898
ASZ77827.1 MF001363_p75 hypothetical protein phrog_7953 unknown function unknown function -1 63191 63472
ASZ77851.1 MF001363_p99 hypothetical protein phrog_200 lipoprotein other 1 79914 80858
ASZ77903.1 MF001363_p151 hypothetical protein phrog_5967 unknown function unknown function 1 106575 106775
ASZ77828.1 MF001363_p76 ribonucleotide reductase of class III (anaerobic), large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 63571 65445
ASZ77829.1 MF001363_p77 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other 1 65798 66550
ASZ77844.1 MF001363_p92 hypothetical protein phrog_5252 unknown function unknown function 1 75776 75958
ASZ77824.1 MF001363_p72 hypothetical protein phrog_5116 unknown function unknown function -1 61804 61986
ASZ77779.1 MF001363_p27 hypothetical protein phrog_3497 unknown function unknown function 1 16191 16628
ASZ77905.1 MF001363_p153 capsid and scaffold protein phrog_4905 unknown function unknown function 1 107223 107564
ASZ77892.1 MF001363_p140 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 102282 103145
ASZ77821.1 MF001363_p69 hypothetical protein phrog_2502 unknown function unknown function -1 60309 60704
ASZ77899.1 MF001363_p147 hypothetical protein phrog_13127 unknown function unknown function 1 105234 105632
ASZ77755.1 MF001363_p3 hypothetical protein phrog_4379 unknown function unknown function -1 1674 2018
ASZ77757.1 MF001363_p5 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover -1 2125 2337
ASZ77756.1 MF001363_p4 hypothetical protein singleton unknown function unknown function -1 2018 2125
ASZ77812.1 MF001363_p60 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 53223 54197
ASZ77846.1 MF001363_p94 hypothetical protein phrog_1479 unknown function unknown function 1 77090 77407
ASZ77868.1 MF001363_p116 hypothetical protein phrog_14410 unknown function unknown function 1 89778 89981
ASZ77809.1 MF001363_p57 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 49926 51449
ASZ77766.1 MF001363_p14 A2 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 7122 7538
ASZ77890.1 MF001363_p138 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 101510 101800
ASZ77772.1 MF001363_p20 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover -1 11323 11568
ASZ77811.1 MF001363_p59 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 52241 53020
ASZ77879.1 MF001363_p127 hypothetical protein phrog_5486 unknown function unknown function 1 94484 94903
ASZ77765.1 MF001363_p13 hypothetical protein phrog_3747 unknown function unknown function 1 6649 6900
ASZ77807.1 MF001363_p55 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 46409 48976
ASZ77788.1 MF001363_p36 tail fiber protein phrog_3889 base plate tail tube protein tail 1 23623 24522
ASZ77876.1 MF001363_p124 hypothetical protein phrog_5021 unknown function unknown function 1 93446 93841
ASZ77789.1 MF001363_p37 hypothetical protein phrog_313 Tail assembly chaperone tail 1 24519 24923
ASZ77805.1 MF001363_p53 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 44570 45922
ASZ77902.1 MF001363_p150 hypothetical protein phrog_4731 unknown function unknown function 1 106142 106474
ASZ77814.1 MF001363_p62 hypothetical protein phrog_4053 transcriptional regulator transcription regulation -1 54473 54781
ASZ77796.1 MF001363_p44 tail fiber protein phrog_5481 tail fiber protein tail 1 35195 38146
ASZ77797.1 MF001363_p45 hypothetical protein phrog_5592 unknown function unknown function -1 38432 38683
ASZ77793.1 MF001363_p41 tail length tape-measure protein phrog_31 central tail fiber J tail 1 29861 32710
ASZ77775.1 MF001363_p23 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 12136 12402
ASZ77834.1 MF001363_p82 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 71015 71545
ASZ77787.1 MF001363_p35 major tail protein phrog_3575 major tail protein tail 1 22209 23618
ASZ77819.1 MF001363_p67 hypothetical protein phrog_5291 unknown function unknown function -1 56686 56919
ASZ77873.1 MF001363_p121 pyruvate formate-lyase phrog_1209 unknown function unknown function 1 92388 92756
ASZ77857.1 MF001363_p105 hypothetical protein phrog_5441 unknown function unknown function 1 84130 84252
ASZ77891.1 MF001363_p139 hypothetical protein phrog_6798 unknown function unknown function 1 101902 102282
ASZ77803.1 MF001363_p51 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 43301 44074
ASZ77817.1 MF001363_p65 hypothetical protein phrog_643 transcriptional regulator transcription regulation -1 55683 55919
ASZ77822.1 MF001363_p70 hypothetical protein phrog_2502 unknown function unknown function -1 60714 61142
ASZ77848.1 MF001363_p96 hypothetical protein phrog_5077 unknown function unknown function 1 77932 78102
ASZ77886.1 MF001363_p134 endolysin phrog_465 endolysin lysis 1 99606 100019
ASZ77867.1 MF001363_p115 hypothetical protein phrog_11405 unknown function unknown function 1 89414 89590
ASZ77830.1 MF001363_p78 hypothetical protein phrog_5357 tail length tape measure protein tail 1 66552 66794
ASZ77885.1 MF001363_p133 holin phrog_860 holin lysis 1 98953 99609
ASZ77896.1 MF001363_p144 phosphoesterase singleton unknown function unknown function 1 103945 104310
ASZ77842.1 MF001363_p90 hypothetical protein phrog_4586 unknown function unknown function 1 74761 74973
ASZ77889.1 MF001363_p137 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 100990 101517
ASZ77866.1 MF001363_p114 hypothetical protein phrog_7572 unknown function unknown function 1 88517 88870
ASZ77900.1 MF001363_p148 hypothetical protein phrog_4984 unknown function unknown function 1 105629 105910
ASZ77853.1 MF001363_p101 cobalt-zinc-cadmium resistance protein phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 82178 82855
ASZ77906.1 MF001363_p154 hypothetical protein phrog_4182 unknown function unknown function 1 107575 107997
ASZ77816.1 MF001363_p64 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 55165 55575
ASZ77888.1 MF001363_p136 hypothetical protein phrog_4328 unknown function unknown function 1 100586 100993
ASZ77912.1 MF001363_p160 hypothetical protein phrog_8583 unknown function unknown function 1 110230 111114
ASZ77863.1 MF001363_p111 hypothetical protein phrog_7900 unknown function unknown function 1 86663 86854
ASZ77761.1 MF001363_p9 hypothetical protein phrog_16959 unknown function unknown function -1 3407 3715
ASZ77893.1 MF001363_p141 hypothetical protein phrog_7810 unknown function unknown function 1 103145 103513
ASZ77897.1 MF001363_p145 hypothetical protein phrog_4979 unknown function unknown function 1 104473 104904
ASZ77771.1 MF001363_p19 hypothetical protein phrog_415 polynucleotide kinase other 1 10425 11159
ASZ77780.1 MF001363_p28 portal (connector) protein phrog_12 portal protein head and packaging 1 16628 17845
ASZ77823.1 MF001363_p71 hypothetical protein phrog_1818 unknown function unknown function -1 61145 61660
ASZ77895.1 MF001363_p143 phosphoesterase singleton unknown function unknown function 1 103719 103934
ASZ77777.1 MF001363_p25 hypothetical protein phrog_3802 terminase small subunit head and packaging 1 14278 14760
ASZ77884.1 MF001363_p132 Clp protease-like protein phrog_1827 ATP-dependent protease other 1 98197 98796
ASZ77798.1 MF001363_p46 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 38661 39107
ASZ77753.1 MF001363_p1 hypothetical protein phrog_12351 unknown function unknown function -1 1114 1353
ASZ77781.1 MF001363_p29 fibritin protein phrog_2973 Hoc-like head decoration head and packaging 1 17842 18324
ASZ77820.1 MF001363_p68 hypothetical protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism -1 56903 59692
ASZ77784.1 MF001363_p32 hypothetical protein phrog_442 head-tail adaptor connector 1 20414 20926
ASZ77783.1 MF001363_p31 major capsid protein phrog_10 major head protein head and packaging 1 18978 20354
ASZ77875.1 MF001363_p123 hypothetical protein phrog_1235 unknown function unknown function 1 93202 93387
ASZ77877.1 MF001363_p125 hypothetical protein phrog_2855 unknown function unknown function 1 93918 94199
ASZ77794.1 MF001363_p42 tail fibers protein phrog_3890 straight fibre tail protein tail 1 32711 34768
ASZ77854.1 MF001363_p102 hypothetical protein singleton unknown function unknown function 1 83070 83258
ASZ77870.1 MF001363_p118 hypothetical protein phrog_5598 unknown function unknown function 1 90987 91241
ASZ77871.1 MF001363_p119 hypothetical protein phrog_5919 unknown function unknown function 1 91242 91406
ASZ77862.1 MF001363_p110 hypothetical protein phrog_5473 unknown function unknown function 1 86377 86562
ASZ77865.1 MF001363_p113 hypothetical protein phrog_6053 unknown function unknown function 1 87967 88284
ASZ77810.1 MF001363_p58 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 51481 52248
ASZ77841.1 MF001363_p89 tail tape measure protein phrog_2380 unknown function unknown function 1 74504 74719
ASZ77887.1 MF001363_p135 hypothetical protein phrog_5944 unknown function unknown function 1 100095 100466
ASZ77882.1 MF001363_p130 hypothetical protein phrog_4243 unknown function unknown function 1 96044 96742
ASZ77869.1 MF001363_p117 hypothetical protein phrog_2210 unknown function unknown function 1 90525 90725
ASZ77804.1 MF001363_p52 hypothetical protein phrog_4258 unknown function unknown function -1 44067 44429
ASZ77795.1 MF001363_p43 hypothetical protein phrog_1084 unknown function unknown function 1 34773 35195
ASZ77901.1 MF001363_p149 hypothetical protein phrog_4804 unknown function unknown function 1 105907 106152
ASZ77858.1 MF001363_p106 hypothetical protein phrog_5153 unknown function unknown function 1 84266 84472
ASZ77874.1 MF001363_p122 hypothetical protein phrog_4499 unknown function unknown function 1 92838 93137
ASZ77769.1 MF001363_p17 hypothetical protein phrog_8297 unknown function unknown function 1 9650 9907
ASZ77760.1 MF001363_p8 hypothetical protein phrog_6741 unknown function unknown function -1 2871 3392
ASZ77786.1 MF001363_p34 hypothetical protein phrog_3907 tail terminator connector 1 21697 22182
ASZ77774.1 MF001363_p22 hypothetical protein singleton unknown function unknown function -1 11820 11933
ASZ77785.1 MF001363_p33 hypothetical protein phrog_3725 tail completion or Neck1 protein connector 1 20926 21693
ASZ77826.1 MF001363_p74 hypothetical protein phrog_5236 unknown function unknown function -1 62978 63181
ASZ77808.1 MF001363_p56 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 49039 49929
ASZ77898.1 MF001363_p146 hypothetical protein phrog_3880 unknown function unknown function 1 104983 105234
ASZ77855.1 MF001363_p103 antitermination protein Q phrog_6060 anti-termination protein Q-like transcription regulation 1 83504 83689
ASZ77859.1 MF001363_p107 hypothetical protein phrog_4551 unknown function unknown function 1 84563 84838
ASZ77778.1 MF001363_p26 terminase large subunit phrog_2 terminase large subunit head and packaging 1 14760 16076
ASZ77837.1 MF001363_p85 hypothetical protein phrog_13270 unknown function unknown function 1 72743 73012
ASZ77818.1 MF001363_p66 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism -1 55912 56616
ASZ77759.1 MF001363_p7 hypothetical protein phrog_5145 unknown function unknown function -1 2536 2763
ASZ77843.1 MF001363_p91 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 75004 75705
ASZ77894.1 MF001363_p142 hypothetical protein phrog_6073 Rz-like spanin lysis 1 103513 103719
ASZ77878.1 MF001363_p126 hypothetical protein phrog_4821 unknown function unknown function 1 94192 94491
ASZ77860.1 MF001363_p108 hypothetical protein phrog_5876 unknown function unknown function 1 85387 85659
ASZ77767.1 MF001363_p15 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover 1 7597 7824
ASZ77911.1 MF001363_p159 hypothetical protein phrog_13456 unknown function unknown function 1 109804 110154
ASZ77762.1 MF001363_p10 hypothetical protein phrog_4263 unknown function unknown function -1 3782 4777
ASZ77832.1 MF001363_p80 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 69348 69866
ASZ77835.1 MF001363_p83 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 71542 72396
ASZ77791.1 MF001363_p39 tail length tape-measure protein phrog_3779 tail length tape measure protein tail 1 25434 29141
ASZ77758.1 MF001363_p6 hypothetical protein phrog_5607 unknown function unknown function -1 2340 2489
ASZ77813.1 MF001363_p61 hypothetical protein phrog_8267 unknown function unknown function -1 54187 54387
ASZ77802.1 MF001363_p50 recombinase phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 42284 43261
ASZ77849.1 MF001363_p97 recombination related exonuclease phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 78102 78545
ASZ77856.1 MF001363_p104 hypothetical protein phrog_9447 unknown function unknown function 1 83691 84029
ASZ77825.1 MF001363_p73 NAD-dependent protein deacetylase of SIR2 family phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 61964 62815
ASZ77792.1 MF001363_p40 hypothetical protein phrog_1302 distal tail protein tail 1 29250 29864
ASZ77776.1 MF001363_p24 hypothetical protein phrog_4815 receptor binding tail protein tail 1 12486 14267
ASZ77754.1 MF001363_p2 hypothetical protein phrog_3474 unknown function unknown function -1 1477 1677
ASZ77833.1 MF001363_p81 ribonucleotide reductase of class Ia (aerobic), beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 69870 71015
ASZ77909.1 MF001363_p157 hypothetical protein phrog_5799 unknown function unknown function 1 109005 109193
ASZ77773.1 MF001363_p21 hypothetical protein phrog_6369 unknown function unknown function -1 11568 11672
ASZ77872.1 MF001363_p120 hypothetical protein phrog_4760 unknown function unknown function 1 91566 91859
ASZ77770.1 MF001363_p18 hypothetical protein phrog_4576 unknown function unknown function 1 9944 10336
ASZ77815.1 MF001363_p63 hypothetical protein phrog_3696 unknown function unknown function -1 54832 55128
ASZ77880.1 MF001363_p128 hypothetical protein phrog_5265 unknown function unknown function 1 95150 95434
ASZ77910.1 MF001363_p158 hypothetical protein phrog_5271 unknown function unknown function 1 109193 109804
ASZ77864.1 MF001363_p112 hypothetical protein phrog_6221 unknown function unknown function 1 87705 87869
ASZ77800.1 MF001363_p48 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 39979 40461
ASZ77883.1 MF001363_p131 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 97432 98184
ASZ77908.1 MF001363_p156 hypothetical protein phrog_6021 unknown function unknown function 1 108772 109005
ASZ77847.1 MF001363_p95 hypothetical protein phrog_938 endolysin lysis 1 77413 77862
ASZ77831.1 MF001363_p79 ribonucleotide reductase of class Ia (aerobic), alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 66918 69248
ASZ77806.1 MF001363_p54 hypothetical protein phrog_4386 unknown function unknown function -1 45919 46416
ASZ77764.1 MF001363_p12 hypothetical protein phrog_4718 unknown function unknown function 1 6266 6484
ASZ77768.1 MF001363_p16 A1 protein phrog_1745 DNA transfer protein other 1 7933 9597
ASZ77840.1 MF001363_p88 hypothetical protein phrog_4516 unknown function unknown function 1 73927 74442
ASZ77782.1 MF001363_p30 capsid and scaffold protein phrog_80 head maturation protease head and packaging 1 18328 18960
ASZ77801.1 MF001363_p49 hypothetical protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 40465 42303
ASZ77799.1 MF001363_p47 ribonuclease H phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 39104 39979
ASZ77907.1 MF001363_p155 hypothetical protein phrog_4605 unknown function unknown function 1 108019 108561
ASZ77763.1 MF001363_p11 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5242 5766
ASZ77845.1 MF001363_p93 hypothetical protein phrog_1491 tail fiber protein tail 1 76012 76650
ASZ77790.1 MF001363_p38 hypothetical protein phrog_3914 tail assembly chaperone tail 1 24985 25353
ASZ77904.1 MF001363_p152 hypothetical protein phrog_4215 unknown function unknown function 1 106772 107239