| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF001367 |
Definition |
Staphylococcus phage SA4, partial genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; unclassified Rakietenvirinae. |
DB of origin |
NUCCORE |
Length |
10440 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
10 |
%GC |
29.26 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ78262.1 | MF001367_p5 | hypothetical protein | phrog_5979 | unknown function | unknown function | -1 | 4358 | 5785 |
| ASZ78266.1 | MF001367_p9 | lysin | phrog_635 | endolysin | lysis | -1 | 8964 | 9713 |
| ASZ78261.1 | MF001367_p4 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1958 | 4243 |
| ASZ78263.1 | MF001367_p6 | hypothetical protein | phrog_199 | holin | lysis | -1 | 5760 | 6182 |
| ASZ78260.1 | MF001367_p3 | neck appendage | phrog_2150 | terminase | head and packaging | 1 | 695 | 1942 |
| ASZ78258.1 | MF001367_p1 | hypothetical protein | phrog_8543 | unknown function | unknown function | 1 | 1 | 162 |
| ASZ78265.1 | MF001367_p8 | tail fibers protein | phrog_9604 | tail protein | tail | -1 | 8005 | 8901 |
| ASZ78259.1 | MF001367_p2 | hypothetical protein | phrog_6099 | unknown function | unknown function | 1 | 165 | 647 |
| ASZ78267.1 | MF001367_p10 | major teichoic acid biosynthesis protein C | singleton | unknown function | unknown function | -1 | 9725 | 10440 |
| ASZ78264.1 | MF001367_p7 | tail fiber protein | phrog_2248 | tail protein | tail | -1 | 6185 | 7948 |