| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF033350 |
Definition |
Acinetobacter phage vB_ApiP_P1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus; Acinetobacter virus P1. |
DB of origin |
NUCCORE |
Length |
41208 |
Host Name |
Acinetobacter pittii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
39.19 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASN73491.1 | MF033350_p30 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18241 | 18891 |
| ASN73468.1 | MF033350_p7 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 3409 | 3972 |
| ASN73469.1 | MF033350_p8 | hypothetical protein | phrog_9054 | unknown function | unknown function | 1 | 4018 | 4155 |
| ASN73471.1 | MF033350_p10 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 4324 | 4722 |
| ASN73503.1 | MF033350_p42 | internal virion protein C | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 32168 | 35266 |
| ASN73490.1 | MF033350_p29 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 17306 | 18241 |
| ASN73509.1 | MF033350_p48 | hypothetical protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40822 | 40956 |
| ASN73482.1 | MF033350_p21 | hypothetical protein | phrog_14634 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9473 | 10210 |
| ASN73478.1 | MF033350_p17 | hypothetical protein | phrog_17267 | unknown function | unknown function | 1 | 7295 | 7606 |
| ASN73464.1 | MF033350_p3 | hypothetical protein | phrog_17142 | unknown function | unknown function | 1 | 1766 | 2017 |
| ASN73507.1 | MF033350_p46 | DNA maturase A | phrog_891 | terminase small subunit | head and packaging | 1 | 38570 | 38878 |
| ASN73465.1 | MF033350_p4 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 2088 | 2597 |
| ASN73484.1 | MF033350_p23 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11434 | 13746 |
| ASN73508.1 | MF033350_p47 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38888 | 40825 |
| ASN73487.1 | MF033350_p26 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15407 | 16309 |
| ASN73485.1 | MF033350_p24 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13965 | 14855 |
| ASN73462.1 | MF033350_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 870 | 1052 |
| ASN73499.1 | MF033350_p38 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 25723 | 26283 |
| ASN73504.1 | MF033350_p43 | tail fiber protein | singleton | unknown function | unknown function | 1 | 35273 | 37522 |
| ASN73480.1 | MF033350_p19 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 7923 | 8159 |
| ASN73506.1 | MF033350_p45 | endolysin | phrog_181 | endolysin | lysis | 1 | 37892 | 38449 |
| ASN73479.1 | MF033350_p18 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 7606 | 7923 |
| ASN73474.1 | MF033350_p13 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 5719 | 5886 |
| ASN73495.1 | MF033350_p34 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 21874 | 23430 |
| ASN73502.1 | MF033350_p41 | structural protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29270 | 32158 |
| ASN73475.1 | MF033350_p14 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 6064 | 6291 |
| ASN73493.1 | MF033350_p32 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 21420 | 21617 |
| ASN73510.1 | MF033350_p49 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 40916 | 41119 |
| ASN73476.1 | MF033350_p15 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 6281 | 6505 |
| ASN73488.1 | MF033350_p27 | tRNA nucleotidyltransferase | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 16299 | 16865 |
| ASN73473.1 | MF033350_p12 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 5274 | 5708 |
| ASN73466.1 | MF033350_p5 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2599 | 2973 |
| ASN73500.1 | MF033350_p39 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 26292 | 28583 |
| ASN73496.1 | MF033350_p35 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23439 | 24299 |
| ASN73463.1 | MF033350_p2 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 1121 | 1327 |
| ASN73472.1 | MF033350_p11 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 4793 | 5272 |
| ASN73467.1 | MF033350_p6 | hypothetical protein | phrog_11839 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 2964 | 3080 |
| ASN73477.1 | MF033350_p16 | DNA primase/helicase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6495 | 7295 |
| ASN73505.1 | MF033350_p44 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 37570 | 37905 |
| ASN73481.1 | MF033350_p20 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 8172 | 9470 |
| ASN73489.1 | MF033350_p28 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16862 | 17302 |
| ASN73470.1 | MF033350_p9 | hypothetical protein | phrog_13611 | unknown function | unknown function | 1 | 4145 | 4315 |
| ASN73501.1 | MF033350_p40 | internal virion protein B | phrog_6056 | internal virion protein | head and packaging | 1 | 28583 | 29257 |
| ASN73486.1 | MF033350_p25 | hypothetical protein | phrog_5437 | unknown function | unknown function | 1 | 15028 | 15363 |
| ASN73492.1 | MF033350_p31 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18900 | 21317 |
| ASN73494.1 | MF033350_p33 | structural protein | phrog_4893 | unknown function | unknown function | 1 | 21614 | 21865 |
| ASN73483.1 | MF033350_p22 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 10207 | 11181 |
| ASN73497.1 | MF033350_p36 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24315 | 25346 |
| ASN73498.1 | MF033350_p37 | tail tubular protein A | phrog_6633 | tail protein | tail | 1 | 25402 | 25587 |