Genomic map of Pasteurella phage PHB02 (MF034659)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF034659
Definition
Pasteurella phage PHB02, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Wuhanvirus; Pasteurella virus PHB02.
DB of origin
NUCCORE
Length
38670
Host Name
Pasteurella multocida
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
40.84
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARV77596.1 MF034659_p32 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism -1 28816 29268
ARV77569.1 MF034659_p5 holin phrog_920 holin lysis -1 3642 3890
ARV77565.1 MF034659_p1 DNA maturation protein phrog_38 terminase large subunit head and packaging -1 740 2512
ARV77592.1 MF034659_p28 hypothetical protein phrog_29401 unknown function unknown function -1 26233 26532
ARV77594.1 MF034659_p30 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 26677 28389
ARV77608.1 MF034659_p44 hypothetical protein singleton unknown function unknown function -1 36096 36428
ARV77597.1 MF034659_p33 single stranded DNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29271 29969
ARV77599.1 MF034659_p35 hypothetical protein phrog_5321 unknown function unknown function -1 30173 30487
ARV77585.1 MF034659_p21 hypothetical protein phrog_36792 unknown function unknown function -1 22679 22912
ARV77583.1 MF034659_p19 hypothetical protein phrog_30008 unknown function unknown function -1 21470 21739
ARV77567.1 MF034659_p3 endopeptidase phrog_1327 Rz-like spanin lysis -1 2921 3388
ARV77572.1 MF034659_p8 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging -1 7028 11113
ARV77586.1 MF034659_p22 hypothetical protein singleton unknown function unknown function -1 22922 23056
ARV77568.1 MF034659_p4 DNA packaging protein A phrog_1351 terminase small subunit head and packaging -1 3404 3655
ARV77605.1 MF034659_p41 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 33078 35681
ARV77573.1 MF034659_p9 internal virion protein C phrog_1339 internal virion protein head and packaging -1 11127 13343
ARV77587.1 MF034659_p23 hypothetical protein phrog_30057 unknown function unknown function -1 23053 23331
ARV77591.1 MF034659_p27 hypothetical protein phrog_2254 unknown function unknown function -1 26003 26236
ARV77579.1 MF034659_p15 capsid assembly protein phrog_1052 head assembly head and packaging -1 18465 19340
ARV77584.1 MF034659_p20 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 21784 22689
ARV77602.1 MF034659_p38 hypothetical protein phrog_37450 unknown function unknown function -1 31141 31530
ARV77611.1 MF034659_p47 hypothetical protein phrog_2226 SAM-dependent methyltransferase other -1 37596 37982
ARV77601.1 MF034659_p37 hypothetical protein phrog_36380 unknown function unknown function -1 30627 31148
ARV77595.1 MF034659_p31 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis -1 28364 28816
ARV77588.1 MF034659_p24 hypothetical protein phrog_1334 unknown function unknown function -1 23328 23537
ARV77609.1 MF034659_p45 hypothetical protein phrog_25822 unknown function unknown function -1 36437 37111
ARV77604.1 MF034659_p40 hypothetical protein phrog_2490 unknown function unknown function -1 32931 33065
ARV77603.1 MF034659_p39 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 31624 32622
ARV77581.1 MF034659_p17 host range protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover -1 20986 21282
ARV77578.1 MF034659_p14 major capsid protein phrog_267 major head protein head and packaging -1 17425 18432
ARV77566.1 MF034659_p2 hypothetical protein phrog_35513 unknown function unknown function -1 2502 2924
ARV77598.1 MF034659_p34 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism -1 29992 30180
ARV77571.1 MF034659_p7 tail fiber protein phrog_18162 tail fiber protein tail -1 4014 6920
ARV77576.1 MF034659_p12 tail fiber protein phrog_457 tail protein tail -1 14383 16761
ARV77575.1 MF034659_p11 internal virion protein A phrog_308 internal virion protein head and packaging -1 13852 14361
ARV77593.1 MF034659_p29 hypothetical protein phrog_38481 unknown function unknown function -1 26513 26677
ARV77607.1 MF034659_p43 hypothetical protein singleton unknown function unknown function -1 35920 36102
ARV77574.1 MF034659_p10 internal virion protein B phrog_805 internal virion protein head and packaging -1 13343 13849
ARV77582.1 MF034659_p18 hypothetical protein phrog_1391 unknown function unknown function -1 21282 21470
ARV77610.1 MF034659_p46 sequence-specific DNA binding RNA polymerase II transcription factor singleton unknown function unknown function -1 37214 37561
ARV77589.1 MF034659_p25 hypothetical protein phrog_30082 unknown function unknown function -1 23530 23784
ARV77570.1 MF034659_p6 hypothetical protein singleton unknown function unknown function -1 3868 4017
ARV77590.1 MF034659_p26 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 23794 25977
ARV77600.1 MF034659_p36 hypothetical protein phrog_1312 unknown function unknown function -1 30484 30630
ARV77580.1 MF034659_p16 collar protein phrog_449 head-tail adaptor connector -1 19355 20983
ARV77606.1 MF034659_p42 hypothetical protein singleton unknown function unknown function -1 35733 35927
ARV77577.1 MF034659_p13 tail tubular protein A phrog_446 tail protein tail -1 16767 17354