Genomic map of Sinorhizobium phage phiM5 (MF074189)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF074189
Definition
Sinorhizobium phage phiM5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
44005
Host Name
Sinorhizobium meliloti
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
60.97
Number of singletons
29
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARV77526.1 MF074189_p20 structural protein phrog_3287 virion structural protein head and packaging 1 14146 15654
ARV77536.1 MF074189_p31 5' nucleotidase phrog_2252 endolysin; inhibits RNA polymerase lysis -1 25986 27038
ARV77523.1 MF074189_p17 endolysin phrog_315 endolysin lysis 1 12645 13394
ARV77544.1 MF074189_p39 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 32590 33876
ARV77508.1 MF074189_p3 peptidase phrog_1040 peptidase HslV family other 1 2090 2611
ARV77513.1 MF074189_p8 major capsid protein phrog_1328 major head protein head and packaging 1 6332 7303
ARV77537.1 MF074189_p32 DNA polymerase A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27069 29135
ARV77561.1 MF074189_p56 hypothetical protein phrog_1909 unknown function unknown function -1 40934 41827
ARV77539.1 MF074189_p34 hypothetical protein singleton unknown function unknown function -1 29865 30488
ARV77506.1 MF074189_p1 hypothetical protein singleton unknown function unknown function 1 23 301
ARV77548.1 MF074189_p43 hypothetical protein singleton unknown function unknown function -1 34832 35074
ARV77538.1 MF074189_p33 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29249 29863
ARV77522.1 MF074189_p16 hypothetical protein phrog_6034 unknown function unknown function 1 12117 12635
ARV77555.1 MF074189_p50 hypothetical protein singleton unknown function unknown function -1 37656 38156
ARV77553.1 MF074189_p48 hypothetical protein singleton unknown function unknown function -1 36694 37434
ARV77535.1 MF074189_p30 hypothetical protein singleton unknown function unknown function -1 25749 25970
ARV77519.1 MF074189_p26 hypothetical protein singleton unknown function unknown function -1 21854 22024
ARV77554.1 MF074189_p49 hypothetical protein singleton unknown function unknown function -1 37490 37654
ARV77534.1 MF074189_p29 Bifunctional DNA primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 23196 25640
ARV77530.1 MF074189_p24 internal virion protein singleton unknown function unknown function 1 19182 20273
ARV77524.1 MF074189_p18 holin phrog_873 endolysin head and packaging 1 13395 13904
ARV77557.1 MF074189_p52 hypothetical protein singleton unknown function unknown function -1 38399 38818
ARV77562.1 MF074189_p57 ATPase phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 41916 43121
ARV77511.1 MF074189_p6 hypothetical protein singleton unknown function unknown function 1 5117 5230
ARV77525.1 MF074189_p19 spanin singleton unknown function unknown function 1 13700 14146
ARV77550.1 MF074189_p45 hypothetical protein singleton unknown function unknown function -1 35716 35904
ARV77564.1 MF074189_p59 hypothetical protein singleton unknown function unknown function 1 43581 43949
ARV77510.1 MF074189_p5 hypothetical protein phrog_8161 unknown function unknown function 1 4860 5117
ARV77556.1 MF074189_p51 hypothetical protein singleton unknown function unknown function -1 38149 38547
ARV77547.1 MF074189_p42 DNA binding protein singleton unknown function unknown function 1 34454 34858
ARV77559.1 MF074189_p54 hypothetical protein phrog_25534 unknown function unknown function -1 39185 39574
ARV77517.1 MF074189_p12 tail tubular protein A phrog_2941 virion structural protein head and packaging 1 9356 9973
ARV77520.1 MF074189_p14 hypothetical protein singleton unknown function unknown function 1 10353 10949
ARV77542.1 MF074189_p37 hypothetical protein singleton unknown function unknown function -1 31939 32133
ARV77516.1 MF074189_p11 hypothetical protein phrog_3982 unknown function unknown function 1 9042 9356
ARV77546.1 MF074189_p41 hypothetical protein singleton unknown function unknown function -1 34171 34353
ARV77543.1 MF074189_p38 hypothetical protein phrog_4826 unknown function unknown function -1 32126 32593
ARV77521.1 MF074189_p15 host-binding tail fiber singleton unknown function unknown function 1 10942 12117
ARV77545.1 MF074189_p40 hypothetical protein singleton unknown function unknown function -1 33932 34174
ARV77560.1 MF074189_p55 holliday junction resolvase phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 40006 40530
ARV77551.1 MF074189_p46 hypothetical protein singleton unknown function unknown function -1 35901 36011
ARV77558.1 MF074189_p53 thymidylate kinase singleton unknown function unknown function -1 38885 39181
ARV77518.1 MF074189_p13 minor tail protein phrog_240 head protein head and packaging 1 9970 10350
ARV77563.1 MF074189_p58 hypothetical protein singleton unknown function unknown function -1 42460 42657
ARV77533.1 MF074189_p28 integrase phrog_1 integrase integration and excision -1 22220 23122
ARV77541.1 MF074189_p36 HNH endonuclease singleton unknown function unknown function -1 31641 31853
ARV77531.1 MF074189_p25 internal virion protein singleton unknown function unknown function 1 20279 21823
ARV77552.1 MF074189_p47 hypothetical protein singleton unknown function unknown function -1 36016 36555
ARV77528.1 MF074189_p22 tailspike protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 16228 17634
ARV77514.1 MF074189_p9 hypothetical protein phrog_22789 unknown function unknown function 1 7449 7724
ARV77507.1 MF074189_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 393 2090
ARV77512.1 MF074189_p7 scaffold protein phrog_3927 head scaffolding protein head and packaging 1 5268 6317
ARV77515.1 MF074189_p10 GDSL/SGNH hydrolase family protein phrog_8480 lysophospholipase L1-like esterase other 1 7728 9038
ARV77532.1 MF074189_p27 hypothetical protein singleton unknown function unknown function -1 22018 22218
ARV77549.1 MF074189_p44 tellurite-resistance protein phrog_632 tellurite resistance moron, auxiliary metabolic gene and host takeover -1 35224 35664
ARV77527.1 MF074189_p21 hypothetical protein phrog_22172 unknown function unknown function 1 15873 16235
ARV77509.1 MF074189_p4 portal protein phrog_1216 portal protein head and packaging 1 2713 4863
ARV77529.1 MF074189_p23 internal virion protein singleton unknown function unknown function 1 17638 19182
ARV77540.1 MF074189_p35 Cas4-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 30475 31644