| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF133446 |
Definition |
Mycobacterium phage Bogie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus. |
DB of origin |
NUCCORE |
Length |
48639 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
66.88 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASD53631.1 | MF133446_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 43 | 432 |
| ASD53650.1 | MF133446_p20 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 18761 | 21265 |
| ASD53672.1 | MF133446_p43 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 32579 | 32851 |
| ASD53708.1 | MF133446_p45 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 33024 | 33155 |
| ASD53637.1 | MF133446_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6226 | 6576 |
| ASD53671.1 | MF133446_p42 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 32316 | 32582 |
| ASD53678.1 | MF133446_p51 | hypothetical protein | phrog_11327 | unknown function | unknown function | 1 | 35772 | 35984 |
| ASD53634.1 | MF133446_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3539 | 4876 |
| ASD53636.1 | MF133446_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5282 | 6226 |
| ASD53685.1 | MF133446_p61 | helix-turn-helix DNA binding domain protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40414 | 41007 |
| ASD53654.1 | MF133446_p24 | hypothetical protein | phrog_8357 | unknown function | unknown function | 1 | 23591 | 23821 |
| ASD53682.1 | MF133446_p55 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 37877 | 38119 |
| ASD53707.1 | MF133446_p33 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28729 | 29130 |
| ASD53705.1 | MF133446_p69 | hypothetical protein | phrog_18047 | unknown function | unknown function | 1 | 44341 | 44607 |
| ASD53651.1 | MF133446_p21 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 21258 | 22748 |
| ASD53711.1 | MF133446_p75 | hypothetical protein | phrog_4550 | unknown function | unknown function | 1 | 46296 | 46475 |
| ASD53647.1 | MF133446_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14363 | 16108 |
| ASD53669.1 | MF133446_p40 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 31583 | 32086 |
| ASD53649.1 | MF133446_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17867 | 18760 |
| ASD53688.1 | MF133446_p65 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 41654 | 42652 |
| ASD53699.1 | MF133446_p78 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 46985 | 47443 |
| ASD53633.1 | MF133446_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2094 | 3548 |
| ASD53686.1 | MF133446_p62 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 41000 | 41146 |
| ASD53675.1 | MF133446_p48 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 33726 | 33881 |
| ASD53657.1 | MF133446_p27 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 24738 | 24872 |
| ASD53652.1 | MF133446_p22 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 22761 | 23162 |
| ASD53655.1 | MF133446_p25 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 23834 | 24022 |
| ASD53659.1 | MF133446_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 25888 | 27054 |
| ASD53697.1 | MF133446_p76 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 46472 | 46645 |
| ASD53642.1 | MF133446_p12 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 8023 | 8460 |
| ASD53692.1 | MF133446_p70 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 44612 | 44866 |
| ASD53667.1 | MF133446_p38 | hypothetical protein | phrog_9041 | unknown function | unknown function | 1 | 30881 | 31129 |
| ASD53673.1 | MF133446_p44 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 32848 | 33027 |
| ASD53643.1 | MF133446_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8552 | 9550 |
| ASD53683.1 | MF133446_p56 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 38116 | 38394 |
| ASD53644.1 | MF133446_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9664 | 10263 |
| ASD53638.1 | MF133446_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6580 | 6942 |
| ASD53704.1 | MF133446_p60 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 39977 | 40417 |
| ASD53658.1 | MF133446_p28 | lysin A | phrog_6707 | endolysin | lysis | 1 | 24947 | 25891 |
| ASD53674.1 | MF133446_p47 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33238 | 33729 |
| ASD53635.1 | MF133446_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4880 | 5245 |
| ASD53639.1 | MF133446_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6942 | 7292 |
| ASD53660.1 | MF133446_p30 | hypothetical protein | phrog_6116 | holin | lysis | 1 | 27068 | 27271 |
| ASD53689.1 | MF133446_p66 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 42649 | 43179 |
| ASD53693.1 | MF133446_p71 | hypothetical protein | phrog_10505 | unknown function | unknown function | 1 | 44866 | 45048 |
| ASD53701.1 | MF133446_p81 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48048 | 48431 |
| ASD53710.1 | MF133446_p58 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 39660 | 39749 |
| ASD53700.1 | MF133446_p79 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 47440 | 47808 |
| ASD53702.1 | MF133446_p80 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 47795 | 48043 |
| ASD53640.1 | MF133446_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7308 | 7652 |
| ASD53698.1 | MF133446_p77 | hypothetical protein | phrog_20375 | unknown function | unknown function | 1 | 46642 | 46806 |
| ASD53703.1 | MF133446_p59 | hypothetical protein | phrog_3008 | DNA methyltransferase | other | 1 | 39724 | 39975 |
| ASD53690.1 | MF133446_p67 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 43176 | 43442 |
| ASD53656.1 | MF133446_p26 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 24022 | 24717 |
| ASD53687.1 | MF133446_p63 | hypothetical protein | phrog_11096 | unknown function | unknown function | 1 | 41247 | 41519 |
| ASD53680.1 | MF133446_p53 | DNA translocase | phrog_6152 | unknown function | unknown function | 1 | 36316 | 37383 |
| ASD53676.1 | MF133446_p49 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 33878 | 34804 |
| ASD53694.1 | MF133446_p72 | peptidase | phrog_5855 | unknown function | unknown function | 1 | 45121 | 45621 |
| ASD53709.1 | MF133446_p46 | hypothetical protein | phrog_11260 | unknown function | unknown function | 1 | 33116 | 33238 |
| ASD53668.1 | MF133446_p39 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 31126 | 31521 |
| ASD53679.1 | MF133446_p52 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 35981 | 36319 |
| ASD53695.1 | MF133446_p73 | hypothetical protein | phrog_7429 | unknown function | unknown function | 1 | 45697 | 45909 |
| ASD53684.1 | MF133446_p57 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 38391 | 39584 |
| ASD53691.1 | MF133446_p68 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 43439 | 44341 |
| ASD53653.1 | MF133446_p23 | hypothetical protein | phrog_8501 | minor tail protein | tail | 1 | 23178 | 23576 |
| ASD53666.1 | MF133446_p37 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 30585 | 30884 |
| ASD53646.1 | MF133446_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10596 | 14366 |
| ASD53664.1 | MF133446_p35 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 29489 | 29725 |
| ASD53670.1 | MF133446_p41 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 32086 | 32319 |
| ASD53696.1 | MF133446_p74 | hypothetical protein | phrog_2202 | unknown function | unknown function | 1 | 45973 | 46299 |
| ASD53706.1 | MF133446_p64 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 41516 | 41650 |
| ASD53648.1 | MF133446_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16084 | 17844 |
| ASD53661.1 | MF133446_p31 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 27268 | 27627 |
| ASD53665.1 | MF133446_p36 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 29722 | 30588 |
| ASD53681.1 | MF133446_p54 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37380 | 37883 |
| ASD53662.1 | MF133446_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 27702 | 28658 |
| ASD53645.1 | MF133446_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9664 | 10582 |
| ASD53632.1 | MF133446_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 401 | 2077 |
| ASD53663.1 | MF133446_p34 | helix-turn-helix DNA binding domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 29259 | 29492 |
| ASD53641.1 | MF133446_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7652 | 8026 |
| ASD53677.1 | MF133446_p50 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34801 | 35775 |