Genomic map of Mycobacterium phage Amohnition (MF140398)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140398
Definition
Mycobacterium phage Amohnition, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
61761
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
67.24
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR86294.1 MF140398_p12 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8913 9299
ASR86315.1 MF140398_p34 hypothetical protein phrog_1042 unknown function unknown function 1 29885 30115
ASR86360.1 MF140398_p79 hypothetical protein phrog_5288 unknown function unknown function 1 53677 53940
ASR86345.1 MF140398_p64 hypothetical protein phrog_1911 unknown function unknown function 1 43500 44012
ASR86298.1 MF140398_p16 major tail protein phrog_117 major tail protein tail 1 10531 11145
ASR86286.1 MF140398_p4 hypothetical protein phrog_2622 unknown function unknown function 1 980 1183
ASR86291.1 MF140398_p9 hypothetical protein phrog_1757 unknown function unknown function 1 6891 7082
ASR86326.1 MF140398_p45 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36255 36491
ASR86352.1 MF140398_p71 hypothetical protein phrog_549 unknown function unknown function 1 50158 50541
ASR86346.1 MF140398_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44113 44352
ASR86302.1 MF140398_p21 minor tail protein phrog_110 minor tail protein tail 1 17620 19395
ASR86341.1 MF140398_p60 hypothetical protein phrog_3492 unknown function unknown function 1 42444 42749
ASR86311.1 MF140398_p30 holin phrog_565 holin lysis 1 27721 28185
ASR86371.1 MF140398_p90 hypothetical protein phrog_12202 unknown function unknown function 1 59492 59614
ASR86328.1 MF140398_p47 hypothetical protein phrog_2908 unknown function unknown function 1 36704 37051
ASR86299.1 MF140398_p17 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11325 12196
ASR86327.1 MF140398_p46 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 36488 36700
ASR86288.1 MF140398_p6 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1387 2811
ASR86308.1 MF140398_p27 hypothetical protein phrog_240 head protein head and packaging 1 24876 25247
ASR86364.1 MF140398_p83 hypothetical protein phrog_2822 unknown function unknown function 1 55743 56357
ASR86343.1 MF140398_p62 hypothetical protein phrog_1581 unknown function unknown function 1 43082 43294
ASR86312.1 MF140398_p31 hypothetical protein phrog_3413 unknown function unknown function 1 28182 28520
ASR86306.1 MF140398_p25 minor tail protein phrog_746 minor tail protein tail 1 21373 23781
ASR86293.1 MF140398_p11 major capsid protein phrog_10 major head protein head and packaging 1 7821 8753
ASR86300.1 MF140398_p19 tape measure protein phrog_971 endolysin lysis 1 12196 16386
ASR86336.1 MF140398_p55 hypothetical protein phrog_3186 unknown function unknown function 1 39941 40408
ASR86318.1 MF140398_p37 hypothetical protein phrog_26689 unknown function unknown function 1 31006 31146
ASR86348.1 MF140398_p67 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44727 47348
ASR86329.1 MF140398_p48 hypothetical protein phrog_6733 unknown function unknown function 1 37124 37360
ASR86361.1 MF140398_p80 hypothetical protein phrog_666 unknown function unknown function 1 53937 54149
ASR86285.1 MF140398_p3 hypothetical protein phrog_2074 unknown function unknown function 1 416 673
ASR86350.1 MF140398_p69 hypothetical protein phrog_3478 unknown function unknown function 1 48438 49046
ASR86338.1 MF140398_p57 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40704 41258
ASR86283.1 MF140398_p1 hypothetical protein phrog_5391 unknown function unknown function 1 70 210
ASR86331.1 MF140398_p50 hypothetical protein phrog_3903 unknown function unknown function 1 37521 37778
ASR86375.1 MF140398_p94 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61401 61697
ASR86355.1 MF140398_p74 hypothetical protein phrog_7658 unknown function unknown function 1 51302 51571
ASR86330.1 MF140398_p49 hypothetical protein phrog_2654 unknown function unknown function 1 37357 37524
ASR86356.1 MF140398_p75 hypothetical protein phrog_5546 unknown function unknown function 1 51628 51840
ASR86301.1 MF140398_p20 minor tail protein phrog_106 minor tail protein tail 1 16493 17629
ASR86332.1 MF140398_p51 HTH DNA binding protein phrog_2286 unknown function unknown function 1 37775 38563
ASR86314.1 MF140398_p33 endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28755 29888
ASR86305.1 MF140398_p24 minor tail protein phrog_1736 minor tail protein tail 1 21059 21373
ASR86335.1 MF140398_p54 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 39555 39944
ASR86309.1 MF140398_p28 lysin A phrog_1519 endolysin lysis 1 25269 26972
ASR86353.1 MF140398_p72 hypothetical protein phrog_1338 unknown function unknown function 1 50538 50810
ASR86359.1 MF140398_p78 hypothetical protein phrog_7731 unknown function unknown function 1 53282 53680
ASR86316.1 MF140398_p35 HTH DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30303 30722
ASR86370.1 MF140398_p89 hypothetical protein phrog_4560 unknown function unknown function 1 59241 59492
ASR86362.1 MF140398_p81 hypothetical protein phrog_19138 unknown function unknown function 1 54157 54450
ASR86297.1 MF140398_p15 head-to-tail connector protein phrog_123 tail terminator connector 1 9965 10381
ASR86342.1 MF140398_p61 hypothetical protein phrog_5466 unknown function unknown function 1 42807 43085
ASR86304.1 MF140398_p23 minor tail protein phrog_1565 minor tail protein tail 1 19971 21053
ASR86295.1 MF140398_p13 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9299 9697
ASR86289.1 MF140398_p7 portal protein phrog_104 portal protein head and packaging 1 2823 4376
ASR86372.1 MF140398_p91 DNA binding domain protein phrog_4095 unknown function unknown function 1 59731 60438
ASR86320.1 MF140398_p39 hypothetical protein singleton unknown function unknown function -1 32189 32428
ASR86321.1 MF140398_p40 hypothetical protein phrog_12017 unknown function unknown function -1 32498 32710
ASR86324.1 MF140398_p43 membrane protein phrog_950 unknown function unknown function -1 34757 35581
ASR86368.1 MF140398_p87 hypothetical protein phrog_2433 unknown function unknown function 1 57523 58212
ASR86376.1 MF140398_p18 tail assembly chaperone phrog_1861 unknown function unknown function 1 11325 11780
ASR86334.1 MF140398_p53 hypothetical protein phrog_2781 unknown function unknown function 1 38811 39545
ASR86323.1 MF140398_p42 hypothetical protein phrog_8155 unknown function unknown function 1 34438 34680
ASR86325.1 MF140398_p44 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35639 36010
ASR86287.1 MF140398_p5 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1167 1403
ASR86366.1 MF140398_p85 hypothetical protein phrog_16857 unknown function unknown function 1 56925 57068
ASR86367.1 MF140398_p86 hypothetical protein phrog_2074 unknown function unknown function 1 57065 57322
ASR86313.1 MF140398_p32 hypothetical protein phrog_1738 unknown function unknown function 1 28517 28768
ASR86339.1 MF140398_p58 hypothetical protein phrog_2870 unknown function unknown function 1 41255 41578
ASR86344.1 MF140398_p63 hypothetical protein phrog_2388 unknown function unknown function 1 43291 43416
ASR86354.1 MF140398_p73 hypothetical protein phrog_21827 membrane protein moron, auxiliary metabolic gene and host takeover 1 50844 51173
ASR86303.1 MF140398_p22 minor tail protein phrog_1697 minor tail protein tail 1 19395 19892
ASR86363.1 MF140398_p82 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54551 55741
ASR86337.1 MF140398_p56 hypothetical protein phrog_1956 unknown function unknown function 1 40401 40691
ASR86317.1 MF140398_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30719 31009
ASR86319.1 MF140398_p38 queuine tRNA-glycosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31281 32135
ASR86369.1 MF140398_p88 hypothetical protein phrog_30522 unknown function unknown function 1 58331 59011
ASR86307.1 MF140398_p26 hypothetical protein phrog_416 minor tail protein tail 1 23778 24782
ASR86290.1 MF140398_p8 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4405 6894
ASR86322.1 MF140398_p41 integrase phrog_1 integrase integration and excision 1 33014 34399
ASR86374.1 MF140398_p93 hypothetical protein phrog_4561 unknown function unknown function 1 61150 61401
ASR86358.1 MF140398_p77 HTH DNA binding protein phrog_2342 unknown function unknown function 1 52452 53285
ASR86347.1 MF140398_p66 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44352 44687
ASR86310.1 MF140398_p29 lysin B phrog_102 endolysin lysis 1 26969 27709
ASR86296.1 MF140398_p14 head-to-tail connector protein phrog_387 neck protein connector 1 9687 9968
ASR86349.1 MF140398_p68 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47768 48445
ASR86292.1 MF140398_p10 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7198 7755
ASR86373.1 MF140398_p92 hypothetical protein phrog_747 unknown function unknown function 1 60821 61135
ASR86340.1 MF140398_p59 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41578 42447
ASR86284.1 MF140398_p2 hypothetical protein phrog_2293 unknown function unknown function 1 207 419
ASR86333.1 MF140398_p52 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38560 38814
ASR86351.1 MF140398_p70 HTH DNA binding protein phrog_908 unknown function unknown function 1 49043 50146
ASR86357.1 MF140398_p76 hypothetical protein phrog_6045 unknown function unknown function 1 51971 52357
ASR86365.1 MF140398_p84 hypothetical protein phrog_2493 unknown function unknown function 1 56350 56928