Genomic map of Mycobacterium phage Bartholomew (MF140399)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140399
Definition
Mycobacterium phage Bartholomew, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
DB of origin
NUCCORE
Length
46484
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
67.18
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR86396.1 MF140399_p20 minor tail protein phrog_732 minor tail protein tail 1 18144 19037
ASR86409.1 MF140399_p33 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27939 28805
ASR86385.1 MF140399_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6954 7304
ASR86407.1 MF140399_p31 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27476 27709
ASR86426.1 MF140399_p51 hypothetical protein phrog_3821 unknown function unknown function 1 35610 35894
ASR86392.1 MF140399_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9941 10859
ASR86377.1 MF140399_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
ASR86410.1 MF140399_p34 hypothetical protein phrog_3507 unknown function unknown function 1 28802 29101
ASR86404.1 MF140399_p28 hypothetical protein phrog_404 minor tail protein tail 1 25485 25844
ASR86452.1 MF140399_p77 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45893 46276
ASR86401.1 MF140399_p25 lysin A phrog_6707 endolysin lysis 1 23120 24055
ASR86422.1 MF140399_p47 hypothetical protein phrog_4387 unknown function unknown function 1 33532 33813
ASR86388.1 MF140399_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7932 8309
ASR86428.1 MF140399_p53 DNA methylase phrog_2060 DNA methyltransferase other 1 36260 36583
ASR86412.1 MF140399_p36 hypothetical protein phrog_5015 unknown function unknown function 1 29343 29744
ASR86390.1 MF140399_p14 major tail protein phrog_476 major tail protein tail 1 8834 9832
ASR86417.1 MF140399_p41 hypothetical protein phrog_5559 unknown function unknown function 1 31081 31260
ASR86447.1 MF140399_p72 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 44151 44489
ASR86445.1 MF140399_p70 hypothetical protein phrog_4550 unknown function unknown function 1 43762 43935
ASR86441.1 MF140399_p66 hypothetical protein phrog_17037 unknown function unknown function 1 42620 42763
ASR86449.1 MF140399_p74 hypothetical protein phrog_6617 unknown function unknown function 1 44950 45288
ASR86427.1 MF140399_p52 hypothetical protein phrog_780 unknown function unknown function 1 36036 36263
ASR86431.1 MF140399_p56 hypothetical protein phrog_5921 unknown function unknown function 1 37477 37629
ASR86430.1 MF140399_p55 HTH DNA binding protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 36816 37484
ASR86418.1 MF140399_p42 hypothetical protein phrog_5806 unknown function unknown function 1 31257 31388
ASR86408.1 MF140399_p32 hypothetical protein phrog_1622 unknown function unknown function 1 27706 27942
ASR86380.1 MF140399_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3551 4888
ASR86425.1 MF140399_p50 hypothetical protein phrog_6109 unknown function unknown function 1 35371 35613
ASR86399.1 MF140399_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22351 22500
ASR86453.1 MF140399_p43 hypothetical protein phrog_11260 unknown function unknown function 1 31385 31471
ASR86391.1 MF140399_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9941 10540
ASR86382.1 MF140399_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5294 6238
ASR86400.1 MF140399_p24 hypothetical protein phrog_240 head protein head and packaging 1 22517 22879
ASR86423.1 MF140399_p48 DNA translocase phrog_6152 unknown function unknown function 1 33810 34877
ASR86420.1 MF140399_p45 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31617 32546
ASR86429.1 MF140399_p54 hypothetical protein phrog_17383 DNA binding protein DNA, RNA and nucleotide metabolism 1 36580 36819
ASR86439.1 MF140399_p64 hypothetical protein phrog_10505 unknown function unknown function 1 41796 41978
ASR86415.1 MF140399_p39 hypothetical protein phrog_4981 unknown function unknown function 1 30540 30815
ASR86378.1 MF140399_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
ASR86402.1 MF140399_p26 lysin B phrog_102 endolysin lysis 1 24052 25218
ASR86432.1 MF140399_p57 DNA methylase phrog_67 DNA methyltransferase other 1 37622 38488
ASR86442.1 MF140399_p67 hypothetical protein phrog_18896 unknown function unknown function 1 42760 43086
ASR86393.1 MF140399_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10873 14643
ASR86411.1 MF140399_p35 hypothetical protein phrog_9041 unknown function unknown function 1 29098 29346
ASR86413.1 MF140399_p37 hypothetical protein phrog_658 unknown function unknown function 1 29807 30310
ASR86419.1 MF140399_p44 hypothetical protein phrog_4702 unknown function unknown function 1 31471 31620
ASR86395.1 MF140399_p19 minor tail protein phrog_110 minor tail protein tail 1 16385 18121
ASR86414.1 MF140399_p38 hypothetical protein phrog_4656 unknown function unknown function 1 30310 30543
ASR86434.1 MF140399_p59 hypothetical protein phrog_3599 unknown function unknown function 1 39614 40162
ASR86403.1 MF140399_p27 holin phrog_443 holin lysis 1 25240 25488
ASR86406.1 MF140399_p30 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26946 27347
ASR86444.1 MF140399_p69 hypothetical protein phrog_2202 unknown function unknown function 1 43466 43765
ASR86384.1 MF140399_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6592 6954
ASR86386.1 MF140399_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7319 7663
ASR86381.1 MF140399_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4892 5257
ASR86446.1 MF140399_p71 hypothetical protein singleton unknown function unknown function 1 43932 44048
ASR86438.1 MF140399_p63 hypothetical protein phrog_2074 unknown function unknown function 1 41542 41796
ASR86397.1 MF140399_p21 minor tail protein phrog_3493 minor tail protein tail 1 19038 21299
ASR86394.1 MF140399_p18 minor tail protein phrog_106 minor tail protein tail 1 14640 16385
ASR86440.1 MF140399_p65 hypothetical protein phrog_5855 unknown function unknown function 1 42051 42551
ASR86451.1 MF140399_p76 hypothetical protein phrog_7285 unknown function unknown function 1 45640 45888
ASR86387.1 MF140399_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7663 7932
ASR86437.1 MF140399_p62 hypothetical protein singleton unknown function unknown function 1 41394 41537
ASR86450.1 MF140399_p75 hypothetical protein phrog_1186 unknown function unknown function 1 45285 45653
ASR86435.1 MF140399_p60 hypothetical protein phrog_20896 unknown function unknown function 1 40159 40455
ASR86398.1 MF140399_p22 minor tail protein phrog_416 minor tail protein tail 1 21299 22336
ASR86405.1 MF140399_p29 integrase phrog_1 integrase integration and excision -1 25919 26812
ASR86379.1 MF140399_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3560
ASR86389.1 MF140399_p13 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 8306 8743
ASR86448.1 MF140399_p73 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 44548 44751
ASR86424.1 MF140399_p49 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34874 35377
ASR86443.1 MF140399_p68 hypothetical protein phrog_2761 unknown function unknown function 1 43158 43469
ASR86433.1 MF140399_p58 HTH DNA binding protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 38622 39617
ASR86436.1 MF140399_p61 HTH DNA binding domain protein phrog_908 unknown function unknown function 1 40452 41354
ASR86416.1 MF140399_p40 hypothetical protein phrog_5803 unknown function unknown function 1 30812 31084
ASR86383.1 MF140399_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6238 6588
ASR86421.1 MF140399_p46 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32543 33535