| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140402 |
Definition |
Mycobacterium phage Chancellor, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
57697 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
67.97 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASW31741.1 | MF140402_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18633 | 20420 |
| ASW31677.1 | MF140402_p29 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 24596 | 25600 |
| ASW31728.1 | MF140402_p89 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 54032 | 54832 |
| ASW31737.1 | MF140402_p60 | hypothetical protein | phrog_13940 | unknown function | unknown function | 1 | 40081 | 40164 |
| ASW31718.1 | MF140402_p78 | hypothetical protein | phrog_12502 | unknown function | unknown function | 1 | 50342 | 50545 |
| ASW31705.1 | MF140402_p63 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40918 | 41781 |
| ASW31714.1 | MF140402_p74 | hypothetical protein | phrog_10480 | unknown function | unknown function | 1 | 47966 | 48364 |
| ASW31675.1 | MF140402_p27 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 22045 | 22290 |
| ASW31654.1 | MF140402_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 117 | 254 |
| ASW31721.1 | MF140402_p81 | hypothetical protein | phrog_14347 | unknown function | unknown function | 1 | 51787 | 51897 |
| ASW31715.1 | MF140402_p75 | HNH endonuclease | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 48376 | 48852 |
| ASW31670.1 | MF140402_p19 | major tail protein | phrog_117 | major tail protein | tail | 1 | 11727 | 12338 |
| ASW31717.1 | MF140402_p77 | HTH DNA binding protein | phrog_908 | unknown function | unknown function | 1 | 49464 | 50342 |
| ASW31664.1 | MF140402_p12 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 8255 | 8452 |
| ASW31724.1 | MF140402_p84 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52588 | 52761 |
| ASW31663.1 | MF140402_p11 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 5499 | 8258 |
| ASW31691.1 | MF140402_p47 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36169 | 36417 |
| ASW31746.1 | MF140402_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34777 | 35595 |
| ASW31686.1 | MF140402_p39 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 31427 | 31726 |
| ASW31722.1 | MF140402_p82 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51927 | 52196 |
| ASW31679.1 | MF140402_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 26030 | 27640 |
| ASW31716.1 | MF140402_p76 | hypothetical protein | phrog_12358 | unknown function | unknown function | 1 | 48849 | 49439 |
| ASW31668.1 | MF140402_p17 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 10964 | 11224 |
| ASW31739.1 | MF140402_p15 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10244 | 10618 |
| ASW31659.1 | MF140402_p6 | hypothetical protein | phrog_7999 | unknown function | unknown function | 1 | 1286 | 1972 |
| ASW31743.1 | MF140402_p43 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 32769 | 33293 |
| ASW31681.1 | MF140402_p33 | holin | phrog_565 | holin | lysis | 1 | 28471 | 28869 |
| ASW31657.1 | MF140402_p4 | hypothetical protein | phrog_5972 | unknown function | unknown function | 1 | 658 | 927 |
| ASW31678.1 | MF140402_p30 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25622 | 25999 |
| ASW31673.1 | MF140402_p25 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 20421 | 20939 |
| ASW31704.1 | MF140402_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40757 | 40921 |
| ASW31687.1 | MF140402_p40 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 31723 | 32025 |
| ASW31693.1 | MF140402_p49 | hypothetical protein | phrog_14099 | unknown function | unknown function | 1 | 36604 | 36864 |
| ASW31709.1 | MF140402_p68 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 42601 | 43269 |
| ASW31685.1 | MF140402_p38 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31069 | 31395 |
| ASW31734.1 | MF140402_p64 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 41781 | 41924 |
| ASW31680.1 | MF140402_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27640 | 28431 |
| ASW31671.1 | MF140402_p21 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 12441 | 12890 |
| ASW31745.1 | MF140402_p20 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 12441 | 13321 |
| ASW31660.1 | MF140402_p7 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1998 | 2237 |
| ASW31669.1 | MF140402_p18 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 11221 | 11646 |
| ASW31723.1 | MF140402_p83 | hypothetical protein | phrog_16540 | unknown function | unknown function | 1 | 52214 | 52591 |
| ASW31720.1 | MF140402_p80 | protease | phrog_1006 | unknown function | unknown function | 1 | 51093 | 51677 |
| ASW31713.1 | MF140402_p73 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45114 | 47735 |
| ASW31747.1 | MF140402_p88 | hypothetical protein | phrog_11871 | unknown function | unknown function | 1 | 53600 | 53953 |
| ASW31662.1 | MF140402_p10 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3932 | 5518 |
| ASW31672.1 | MF140402_p22 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 13324 | 17499 |
| ASW31738.1 | MF140402_p9 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 2478 | 3920 |
| ASW31736.1 | MF140402_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 38900 | 39289 |
| ASW31674.1 | MF140402_p26 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 20936 | 22033 |
| ASW31730.1 | MF140402_p91 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 55691 | 56398 |
| ASW31725.1 | MF140402_p85 | hypothetical protein | phrog_7647 | unknown function | unknown function | 1 | 52863 | 53096 |
| ASW31732.1 | MF140402_p93 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56785 | 57090 |
| ASW31665.1 | MF140402_p13 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 8544 | 9116 |
| ASW31712.1 | MF140402_p71 | hypothetical protein | phrog_12554 | unknown function | unknown function | 1 | 44482 | 44652 |
| ASW31735.1 | MF140402_p72 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44642 | 45022 |
| ASW31688.1 | MF140402_p41 | hypothetical protein | phrog_3851 | unknown function | unknown function | 1 | 32018 | 32407 |
| ASW31731.1 | MF140402_p92 | hypothetical protein | phrog_14339 | unknown function | unknown function | 1 | 56569 | 56781 |
| ASW31729.1 | MF140402_p90 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 54897 | 55604 |
| ASW31667.1 | MF140402_p16 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 10621 | 10977 |
| ASW31656.1 | MF140402_p3 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 478 | 645 |
| ASW31710.1 | MF140402_p69 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43377 | 43640 |
| ASW31706.1 | MF140402_p65 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 41921 | 42139 |
| ASW31658.1 | MF140402_p5 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 924 | 1286 |
| ASW31719.1 | MF140402_p79 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 50542 | 51042 |
| ASW31655.1 | MF140402_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 251 | 481 |
| ASW31682.1 | MF140402_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28866 | 29201 |
| ASW31701.1 | MF140402_p58 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39492 | 39713 |
| ASW31666.1 | MF140402_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 9175 | 10104 |
| ASW31689.1 | MF140402_p42 | hypothetical protein | phrog_8324 | unknown function | unknown function | 1 | 32404 | 32670 |
| ASW31661.1 | MF140402_p8 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 2234 | 2506 |
| ASW31700.1 | MF140402_p57 | hypothetical protein | phrog_14062 | unknown function | unknown function | 1 | 39286 | 39495 |
| ASW31733.1 | MF140402_p94 | methyltransferase | phrog_2675 | DNA methyltransferase | other | 1 | 57090 | 57665 |
| ASW31727.1 | MF140402_p87 | hypothetical protein | phrog_12916 | unknown function | unknown function | 1 | 53448 | 53603 |
| ASW31742.1 | MF140402_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30638 | 30919 |
| ASW31683.1 | MF140402_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29198 | 29458 |
| ASW31703.1 | MF140402_p61 | DNA polymerase | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40161 | 40757 |
| ASW31698.1 | MF140402_p54 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 37968 | 38207 |
| ASW31694.1 | MF140402_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36908 | 37090 |
| ASW31740.1 | MF140402_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17500 | 18633 |
| ASW31708.1 | MF140402_p67 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42414 | 42530 |
| ASW31699.1 | MF140402_p55 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38211 | 38903 |
| ASW31676.1 | MF140402_p28 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 22283 | 24592 |
| ASW31695.1 | MF140402_p51 | hypothetical protein | phrog_11977 | unknown function | unknown function | 1 | 37087 | 37317 |
| ASW31697.1 | MF140402_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37618 | 37968 |
| ASW31707.1 | MF140402_p66 | hypothetical protein | phrog_12856 | unknown function | unknown function | 1 | 42136 | 42417 |
| ASW31696.1 | MF140402_p52 | endonuclease | phrog_12473 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37314 | 37625 |
| ASW31684.1 | MF140402_p36 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29445 | 30635 |
| ASW31711.1 | MF140402_p70 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43637 | 44482 |
| ASW31692.1 | MF140402_p48 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36414 | 36599 |
| ASW31690.1 | MF140402_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 33531 | 34796 |
| ASW31702.1 | MF140402_p59 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39806 | 40081 |
| ASW31726.1 | MF140402_p86 | hypothetical protein | phrog_3963 | unknown function | unknown function | 1 | 53125 | 53433 |
| ASW31744.1 | MF140402_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35679 | 36038 |