| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140403 |
Definition |
Mycobacterium phage Changeling, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52991 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
64.58 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR86463.1 | MF140403_p10 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 6288 | 6425 |
| ASR86509.1 | MF140403_p56 | hypothetical protein | phrog_2264 | unknown function | unknown function | -1 | 38800 | 38877 |
| ASR86460.1 | MF140403_p7 | hypothetical protein | phrog_819 | tail protein | tail | 1 | 4153 | 5271 |
| ASR86534.1 | MF140403_p81 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47612 | 47917 |
| ASR86502.1 | MF140403_p49 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 34262 | 36301 |
| ASR86490.1 | MF140403_p37 | hypothetical protein | phrog_4193 | unknown function | unknown function | -1 | 28738 | 28875 |
| ASR86470.1 | MF140403_p17 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 13463 | 13987 |
| ASR86465.1 | MF140403_p12 | holin | phrog_526 | holin | lysis | 1 | 7898 | 8287 |
| ASR86499.1 | MF140403_p46 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32725 | 32928 |
| ASR86496.1 | MF140403_p43 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 30267 | 30485 |
| ASR86516.1 | MF140403_p63 | hypothetical protein | phrog_13419 | unknown function | unknown function | -1 | 41269 | 41421 |
| ASR86486.1 | MF140403_p33 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 25115 | 26890 |
| ASR86482.1 | MF140403_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 22020 | 23792 |
| ASR86471.1 | MF140403_p18 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 14018 | 14968 |
| ASR86545.1 | MF140403_p92 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51453 | 51752 |
| ASR86498.1 | MF140403_p45 | HTH DNA binding protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32312 | 32725 |
| ASR86467.1 | MF140403_p14 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 9284 | 11071 |
| ASR86510.1 | MF140403_p57 | hypothetical protein | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38877 | 39509 |
| ASR86514.1 | MF140403_p61 | hypothetical protein | phrog_2187 | unknown function | unknown function | -1 | 40296 | 40439 |
| ASR86524.1 | MF140403_p71 | recombinase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43745 | 44659 |
| ASR86506.1 | MF140403_p53 | hypothetical protein | phrog_2436 | unknown function | unknown function | -1 | 37414 | 37566 |
| ASR86512.1 | MF140403_p59 | hypothetical protein | phrog_1370 | unknown function | unknown function | -1 | 39719 | 39850 |
| ASR86527.1 | MF140403_p74 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 45932 | 46099 |
| ASR86532.1 | MF140403_p79 | hypothetical protein | phrog_3351 | unknown function | unknown function | -1 | 47135 | 47368 |
| ASR86495.1 | MF140403_p42 | hypothetical protein | phrog_3771 | unknown function | unknown function | -1 | 29977 | 30267 |
| ASR86468.1 | MF140403_p15 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 11068 | 12528 |
| ASR86526.1 | MF140403_p73 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45136 | 45726 |
| ASR86525.1 | MF140403_p72 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44656 | 45069 |
| ASR86497.1 | MF140403_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 30516 | 32303 |
| ASR86494.1 | MF140403_p41 | hypothetical protein | phrog_3283 | unknown function | unknown function | -1 | 29765 | 29995 |
| ASR86535.1 | MF140403_p82 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 47914 | 48672 |
| ASR86475.1 | MF140403_p22 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 15794 | 16162 |
| ASR86474.1 | MF140403_p21 | head-to-tail connector protein | phrog_830 | head-tail connector protein | connector | 1 | 15600 | 15794 |
| ASR86481.1 | MF140403_p28 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 21010 | 22023 |
| ASR86507.1 | MF140403_p54 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37569 | 38339 |
| ASR86492.1 | MF140403_p39 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 29033 | 29476 |
| ASR86503.1 | MF140403_p50 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 36298 | 36504 |
| ASR86521.1 | MF140403_p68 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43010 | 43249 |
| ASR86464.1 | MF140403_p11 | lysin A | phrog_317 | endolysin | lysis | 1 | 6426 | 7901 |
| ASR86538.1 | MF140403_p85 | hypothetical protein | phrog_10286 | unknown function | unknown function | -1 | 49277 | 49621 |
| ASR86533.1 | MF140403_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47493 | 47624 |
| ASR86515.1 | MF140403_p62 | non-heme haloperoxidase | phrog_789 | esterase/lipase | other | -1 | 40436 | 41281 |
| ASR86455.1 | MF140403_p2 | VIP2 protein | phrog_3895 | ADP-ribosyltransferase exoenzyme toxin | moron, auxiliary metabolic gene and host takeover | 1 | 1407 | 2000 |
| ASR86473.1 | MF140403_p20 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 15226 | 15603 |
| ASR86500.1 | MF140403_p47 | ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 32930 | 33661 |
| ASR86472.1 | MF140403_p19 | head-to-tail connector protein | phrog_748 | head-tail connector protein | connector | 1 | 15040 | 15222 |
| ASR86504.1 | MF140403_p51 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36501 | 36683 |
| ASR86531.1 | MF140403_p78 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 46917 | 47138 |
| ASR86487.1 | MF140403_p34 | hypothetical protein | phrog_2570 | unknown function | unknown function | 1 | 26957 | 27151 |
| ASR86461.1 | MF140403_p8 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 5275 | 5919 |
| ASR86536.1 | MF140403_p83 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 48812 | 49033 |
| ASR86513.1 | MF140403_p60 | recombination endonuclease 7 | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39878 | 40336 |
| ASR86508.1 | MF140403_p55 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 38336 | 38803 |
| ASR86544.1 | MF140403_p91 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51345 | 51425 |
| ASR86529.1 | MF140403_p76 | hypothetical protein | phrog_8490 | unknown function | unknown function | -1 | 46505 | 46645 |
| ASR86517.1 | MF140403_p64 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41418 | 41651 |
| ASR86479.1 | MF140403_p26 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 17653 | 18482 |
| ASR86519.1 | MF140403_p66 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42084 | 42890 |
| ASR86511.1 | MF140403_p58 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39337 | 39741 |
| ASR86459.1 | MF140403_p6 | tail protein | phrog_1260 | minor tail protein | tail | 1 | 3191 | 4153 |
| ASR86542.1 | MF140403_p89 | hypothetical protein | phrog_6255 | unknown function | unknown function | -1 | 50347 | 50601 |
| ASR86469.1 | MF140403_p16 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 12525 | 13409 |
| ASR86520.1 | MF140403_p67 | hypothetical protein | phrog_2731 | unknown function | unknown function | -1 | 42900 | 43013 |
| ASR86477.1 | MF140403_p24 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 16508 | 16933 |
| ASR86491.1 | MF140403_p38 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 28875 | 29036 |
| ASR86537.1 | MF140403_p84 | hypothetical protein | phrog_15221 | unknown function | unknown function | -1 | 49095 | 49280 |
| ASR86457.1 | MF140403_p4 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2293 | 2589 |
| ASR86539.1 | MF140403_p86 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 49618 | 49974 |
| ASR86489.1 | MF140403_p36 | ParB | phrog_2639 | Arc-like repressor | transcription regulation | 1 | 28309 | 28578 |
| ASR86523.1 | MF140403_p70 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 43472 | 43693 |
| ASR86505.1 | MF140403_p52 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36680 | 37417 |
| ASR86540.1 | MF140403_p87 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 49971 | 50138 |
| ASR86483.1 | MF140403_p30 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23806 | 24258 |
| ASR86541.1 | MF140403_p88 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 50135 | 50335 |
| ASR86518.1 | MF140403_p65 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 41800 | 41982 |
| ASR86458.1 | MF140403_p5 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2625 | 3095 |
| ASR86493.1 | MF140403_p40 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 29463 | 29768 |
| ASR86528.1 | MF140403_p75 | hypothetical protein | phrog_4569 | unknown function | unknown function | -1 | 46240 | 46503 |
| ASR86522.1 | MF140403_p69 | hypothetical protein | phrog_666 | unknown function | unknown function | -1 | 43281 | 43475 |
| ASR86466.1 | MF140403_p13 | lysin B | phrog_102 | endolysin | lysis | 1 | 8284 | 9261 |
| ASR86476.1 | MF140403_p23 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 16162 | 16497 |
| ASR86478.1 | MF140403_p25 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 16952 | 17545 |
| ASR86456.1 | MF140403_p3 | hypothetical protein | phrog_4491 | unknown function | unknown function | 1 | 1997 | 2296 |
| ASR86488.1 | MF140403_p35 | ParA | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 27759 | 28316 |
| ASR86454.1 | MF140403_p1 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 391 | 1155 |
| ASR86484.1 | MF140403_p31 | minor tail protein | phrog_1298 | minor tail protein | tail | 1 | 24255 | 24683 |
| ASR86543.1 | MF140403_p90 | hypothetical protein | phrog_1392 | unknown function | unknown function | -1 | 50610 | 51317 |
| ASR86501.1 | MF140403_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 33735 | 34250 |
| ASR86462.1 | MF140403_p9 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 5930 | 6145 |
| ASR86485.1 | MF140403_p32 | minor tail protein | phrog_726 | unknown function | unknown function | 1 | 24673 | 25104 |
| ASR86480.1 | MF140403_p27 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 18472 | 20976 |
| ASR86530.1 | MF140403_p77 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 46642 | 46920 |