Genomic map of Mycobacterium phage Changeling (MF140403)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140403
Definition
Mycobacterium phage Changeling, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52991
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
64.58
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR86463.1 MF140403_p10 hypothetical protein phrog_1087 unknown function unknown function 1 6288 6425
ASR86509.1 MF140403_p56 hypothetical protein phrog_2264 unknown function unknown function -1 38800 38877
ASR86460.1 MF140403_p7 hypothetical protein phrog_819 tail protein tail 1 4153 5271
ASR86534.1 MF140403_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47612 47917
ASR86502.1 MF140403_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34262 36301
ASR86490.1 MF140403_p37 hypothetical protein phrog_4193 unknown function unknown function -1 28738 28875
ASR86470.1 MF140403_p17 scaffold protein phrog_233 head scaffolding protein head and packaging 1 13463 13987
ASR86465.1 MF140403_p12 holin phrog_526 holin lysis 1 7898 8287
ASR86499.1 MF140403_p46 hypothetical protein phrog_690 unknown function unknown function -1 32725 32928
ASR86496.1 MF140403_p43 hypothetical protein phrog_896 unknown function unknown function -1 30267 30485
ASR86516.1 MF140403_p63 hypothetical protein phrog_13419 unknown function unknown function -1 41269 41421
ASR86486.1 MF140403_p33 minor tail protein phrog_737 minor tail protein tail 1 25115 26890
ASR86482.1 MF140403_p29 minor tail protein phrog_110 minor tail protein tail 1 22020 23792
ASR86471.1 MF140403_p18 major capsid protein phrog_10 major head protein head and packaging 1 14018 14968
ASR86545.1 MF140403_p92 hypothetical protein phrog_1676 unknown function unknown function -1 51453 51752
ASR86498.1 MF140403_p45 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32312 32725
ASR86467.1 MF140403_p14 terminase phrog_9 terminase large subunit head and packaging 1 9284 11071
ASR86510.1 MF140403_p57 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38877 39509
ASR86514.1 MF140403_p61 hypothetical protein phrog_2187 unknown function unknown function -1 40296 40439
ASR86524.1 MF140403_p71 recombinase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43745 44659
ASR86506.1 MF140403_p53 hypothetical protein phrog_2436 unknown function unknown function -1 37414 37566
ASR86512.1 MF140403_p59 hypothetical protein phrog_1370 unknown function unknown function -1 39719 39850
ASR86527.1 MF140403_p74 hypothetical protein phrog_1173 unknown function unknown function -1 45932 46099
ASR86532.1 MF140403_p79 hypothetical protein phrog_3351 unknown function unknown function -1 47135 47368
ASR86495.1 MF140403_p42 hypothetical protein phrog_3771 unknown function unknown function -1 29977 30267
ASR86468.1 MF140403_p15 portal protein phrog_104 portal protein head and packaging 1 11068 12528
ASR86526.1 MF140403_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45136 45726
ASR86525.1 MF140403_p72 hypothetical protein phrog_1562 unknown function unknown function -1 44656 45069
ASR86497.1 MF140403_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30516 32303
ASR86494.1 MF140403_p41 hypothetical protein phrog_3283 unknown function unknown function -1 29765 29995
ASR86535.1 MF140403_p82 hypothetical protein phrog_421 unknown function unknown function -1 47914 48672
ASR86475.1 MF140403_p22 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 15794 16162
ASR86474.1 MF140403_p21 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 15600 15794
ASR86481.1 MF140403_p28 minor tail protein phrog_106 minor tail protein tail 1 21010 22023
ASR86507.1 MF140403_p54 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37569 38339
ASR86492.1 MF140403_p39 hypothetical protein phrog_383 unknown function unknown function -1 29033 29476
ASR86503.1 MF140403_p50 hypothetical protein phrog_2046 unknown function unknown function -1 36298 36504
ASR86521.1 MF140403_p68 hypothetical protein phrog_520 unknown function unknown function -1 43010 43249
ASR86464.1 MF140403_p11 lysin A phrog_317 endolysin lysis 1 6426 7901
ASR86538.1 MF140403_p85 hypothetical protein phrog_10286 unknown function unknown function -1 49277 49621
ASR86533.1 MF140403_p80 hypothetical protein singleton unknown function unknown function -1 47493 47624
ASR86515.1 MF140403_p62 non-heme haloperoxidase phrog_789 esterase/lipase other -1 40436 41281
ASR86455.1 MF140403_p2 VIP2 protein phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1407 2000
ASR86473.1 MF140403_p20 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 15226 15603
ASR86500.1 MF140403_p47 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32930 33661
ASR86472.1 MF140403_p19 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 15040 15222
ASR86504.1 MF140403_p51 hypothetical protein phrog_499 unknown function unknown function -1 36501 36683
ASR86531.1 MF140403_p78 hypothetical protein phrog_1875 unknown function unknown function -1 46917 47138
ASR86487.1 MF140403_p34 hypothetical protein phrog_2570 unknown function unknown function 1 26957 27151
ASR86461.1 MF140403_p8 hypothetical protein phrog_356 minor tail protein tail 1 5275 5919
ASR86536.1 MF140403_p83 hypothetical protein phrog_828 unknown function unknown function -1 48812 49033
ASR86513.1 MF140403_p60 recombination endonuclease 7 phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39878 40336
ASR86508.1 MF140403_p55 hypothetical protein phrog_1167 phosphofructokinase other -1 38336 38803
ASR86544.1 MF140403_p91 hypothetical protein phrog_1445 unknown function unknown function -1 51345 51425
ASR86529.1 MF140403_p76 hypothetical protein phrog_8490 unknown function unknown function -1 46505 46645
ASR86517.1 MF140403_p64 hypothetical protein phrog_397 unknown function unknown function -1 41418 41651
ASR86479.1 MF140403_p26 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17653 18482
ASR86519.1 MF140403_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42084 42890
ASR86511.1 MF140403_p58 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39337 39741
ASR86459.1 MF140403_p6 tail protein phrog_1260 minor tail protein tail 1 3191 4153
ASR86542.1 MF140403_p89 hypothetical protein phrog_6255 unknown function unknown function -1 50347 50601
ASR86469.1 MF140403_p16 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12525 13409
ASR86520.1 MF140403_p67 hypothetical protein phrog_2731 unknown function unknown function -1 42900 43013
ASR86477.1 MF140403_p24 head-to-tail connector protein phrog_123 tail terminator connector 1 16508 16933
ASR86491.1 MF140403_p38 hypothetical protein phrog_542 unknown function unknown function -1 28875 29036
ASR86537.1 MF140403_p84 hypothetical protein phrog_15221 unknown function unknown function -1 49095 49280
ASR86457.1 MF140403_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2293 2589
ASR86539.1 MF140403_p86 hypothetical protein phrog_586 unknown function unknown function -1 49618 49974
ASR86489.1 MF140403_p36 ParB phrog_2639 Arc-like repressor transcription regulation 1 28309 28578
ASR86523.1 MF140403_p70 hypothetical protein phrog_642 unknown function unknown function -1 43472 43693
ASR86505.1 MF140403_p52 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36680 37417
ASR86540.1 MF140403_p87 hypothetical protein phrog_519 unknown function unknown function -1 49971 50138
ASR86483.1 MF140403_p30 minor tail protein phrog_352 minor tail protein tail 1 23806 24258
ASR86541.1 MF140403_p88 hypothetical protein phrog_1946 unknown function unknown function -1 50135 50335
ASR86518.1 MF140403_p65 hypothetical protein phrog_542 unknown function unknown function -1 41800 41982
ASR86458.1 MF140403_p5 hypothetical protein phrog_226 minor tail protein tail 1 2625 3095
ASR86493.1 MF140403_p40 hypothetical protein phrog_2099 unknown function unknown function -1 29463 29768
ASR86528.1 MF140403_p75 hypothetical protein phrog_4569 unknown function unknown function -1 46240 46503
ASR86522.1 MF140403_p69 hypothetical protein phrog_666 unknown function unknown function -1 43281 43475
ASR86466.1 MF140403_p13 lysin B phrog_102 endolysin lysis 1 8284 9261
ASR86476.1 MF140403_p23 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 16162 16497
ASR86478.1 MF140403_p25 major tail subunit phrog_117 major tail protein tail 1 16952 17545
ASR86456.1 MF140403_p3 hypothetical protein phrog_4491 unknown function unknown function 1 1997 2296
ASR86488.1 MF140403_p35 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 27759 28316
ASR86454.1 MF140403_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 391 1155
ASR86484.1 MF140403_p31 minor tail protein phrog_1298 minor tail protein tail 1 24255 24683
ASR86543.1 MF140403_p90 hypothetical protein phrog_1392 unknown function unknown function -1 50610 51317
ASR86501.1 MF140403_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33735 34250
ASR86462.1 MF140403_p9 hypothetical protein phrog_2269 unknown function unknown function 1 5930 6145
ASR86485.1 MF140403_p32 minor tail protein phrog_726 unknown function unknown function 1 24673 25104
ASR86480.1 MF140403_p27 tape measure protein phrog_305 tail length tape measure protein tail 1 18472 20976
ASR86530.1 MF140403_p77 hypothetical protein phrog_1178 unknown function unknown function -1 46642 46920