Genomic map of Mycobacterium phage DarthP (MF140406)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140406
Definition
Mycobacterium phage DarthP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
61594
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
67.24
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASW31790.1 MF140406_p43 membrane protein phrog_950 unknown function unknown function -1 34669 35487
ASW31764.1 MF140406_p18 tail assembly chaperone phrog_1861 unknown function unknown function 1 11325 11780
ASW31779.1 MF140406_p32 hypothetical protein phrog_1738 unknown function unknown function 1 28439 28690
ASW31757.1 MF140406_p10 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7198 7755
ASW31785.1 MF140406_p38 queuine tRNA-glycosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31203 32078
ASW31767.1 MF140406_p20 minor tail protein phrog_106 minor tail protein tail 1 16442 17578
ASW31819.1 MF140406_p72 hypothetical protein phrog_1338 unknown function unknown function 1 50395 50667
ASW31792.1 MF140406_p45 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36145 36378
ASW31784.1 MF140406_p37 hypothetical protein phrog_26689 unknown function unknown function 1 30928 31068
ASW31813.1 MF140406_p66 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44206 44541
ASW31774.1 MF140406_p27 hypothetical protein phrog_240 head protein head and packaging 1 24798 25169
ASW31766.1 MF140406_p19 tape measure protein phrog_971 endolysin lysis 1 12196 16335
ASW31787.1 MF140406_p40 HTH DNA binding protein phrog_33884 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32348 32755
ASW31803.1 MF140406_p56 hypothetical protein phrog_1956 unknown function unknown function 1 40285 40575
ASW31837.1 MF140406_p90 hypothetical protein phrog_12202 unknown function unknown function 1 59325 59447
ASW31825.1 MF140406_p78 hypothetical protein phrog_7731 unknown function unknown function 1 53135 53533
ASW31811.1 MF140406_p64 hypothetical protein phrog_1911 unknown function unknown function 1 43354 43866
ASW31800.1 MF140406_p53 hypothetical protein phrog_2781 unknown function unknown function 1 38695 39429
ASW31782.1 MF140406_p35 HTH DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30225 30644
ASW31808.1 MF140406_p61 hypothetical protein phrog_5466 unknown function unknown function 1 42661 42939
ASW31821.1 MF140406_p74 hypothetical protein phrog_7658 unknown function unknown function 1 51155 51424
ASW31771.1 MF140406_p24 minor tail protein phrog_1736 minor tail protein tail 1 21005 21319
ASW31827.1 MF140406_p80 hypothetical protein phrog_666 unknown function unknown function 1 53790 54002
ASW31817.1 MF140406_p70 HTH DNA binding protein phrog_908 unknown function unknown function 1 48900 50003
ASW31755.1 MF140406_p8 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4321 6894
ASW31836.1 MF140406_p89 hypothetical protein phrog_4560 unknown function unknown function 1 59074 59325
ASW31812.1 MF140406_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43967 44206
ASW31823.1 MF140406_p76 hypothetical protein phrog_6045 unknown function unknown function 1 51824 52210
ASW31758.1 MF140406_p11 major capsid protein phrog_10 major head protein head and packaging 1 7821 8753
ASW31795.1 MF140406_p48 hypothetical protein phrog_6733 unknown function unknown function 1 37008 37244
ASW31801.1 MF140406_p54 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 39439 39828
ASW31833.1 MF140406_p86 hypothetical protein phrog_2074 unknown function unknown function 1 56918 57175
ASW31781.1 MF140406_p34 hypothetical protein phrog_1042 unknown function unknown function 1 29810 30037
ASW31815.1 MF140406_p68 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47625 48302
ASW31830.1 MF140406_p83 hypothetical protein phrog_2822 unknown function unknown function 1 55596 56210
ASW31789.1 MF140406_p42 hypothetical protein phrog_8155 unknown function unknown function 1 34288 34569
ASW31762.1 MF140406_p15 head-to-tail connector protein phrog_123 tail terminator connector 1 9965 10381
ASW31841.1 MF140406_p94 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61234 61530
ASW31777.1 MF140406_p30 holin phrog_565 holin lysis 1 27643 28107
ASW31802.1 MF140406_p55 hypothetical protein phrog_3186 unknown function unknown function 1 39825 40292
ASW31756.1 MF140406_p9 hypothetical protein phrog_1757 unknown function unknown function 1 6891 7082
ASW31765.1 MF140406_p17 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11325 12196
ASW31751.1 MF140406_p4 hypothetical protein phrog_2622 unknown function unknown function 1 980 1183
ASW31810.1 MF140406_p63 hypothetical protein phrog_2388 unknown function unknown function 1 43145 43270
ASW31832.1 MF140406_p85 hypothetical protein phrog_16857 unknown function unknown function 1 56778 56921
ASW31816.1 MF140406_p69 hypothetical protein phrog_3478 unknown function unknown function 1 48310 48903
ASW31752.1 MF140406_p5 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1176 1403
ASW31753.1 MF140406_p6 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1387 2811
ASW31818.1 MF140406_p71 hypothetical protein phrog_549 unknown function unknown function 1 50015 50398
ASW31794.1 MF140406_p47 hypothetical protein phrog_2908 unknown function unknown function 1 36588 36935
ASW31793.1 MF140406_p46 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 36375 36584
ASW31770.1 MF140406_p23 minor tail protein phrog_1565 minor tail protein tail 1 19917 20999
ASW31791.1 MF140406_p44 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35545 35904
ASW31799.1 MF140406_p52 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38444 38698
ASW31749.1 MF140406_p2 hypothetical protein phrog_2293 unknown function unknown function 1 207 419
ASW31838.1 MF140406_p91 DNA binding domain protein phrog_4095 unknown function unknown function 1 59564 60271
ASW31786.1 MF140406_p39 hypothetical protein phrog_12017 unknown function unknown function -1 32135 32347
ASW31822.1 MF140406_p75 hypothetical protein phrog_5546 unknown function unknown function 1 51481 51693
ASW31760.1 MF140406_p13 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9299 9697
ASW31748.1 MF140406_p1 hypothetical protein phrog_5391 unknown function unknown function 1 70 210
ASW31772.1 MF140406_p25 minor tail protein phrog_746 minor tail protein tail 1 21319 23703
ASW31775.1 MF140406_p28 lysin A phrog_1519 endolysin lysis 1 25191 26894
ASW31768.1 MF140406_p21 minor tail protein phrog_110 minor tail protein tail 1 17578 19344
ASW31796.1 MF140406_p49 membrane protein phrog_2654 unknown function unknown function 1 37244 37408
ASW31763.1 MF140406_p16 major tail protein phrog_117 major tail protein tail 1 10531 11145
ASW31831.1 MF140406_p84 hypothetical protein phrog_2493 unknown function unknown function 1 56203 56781
ASW31824.1 MF140406_p77 HTH DNA binding protein phrog_2342 unknown function unknown function 1 52305 53138
ASW31778.1 MF140406_p31 hypothetical protein phrog_3413 unknown function unknown function 1 28104 28442
ASW31806.1 MF140406_p59 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41432 42301
ASW31776.1 MF140406_p29 lysin B phrog_102 endolysin lysis 1 26891 27631
ASW31834.1 MF140406_p87 hypothetical protein phrog_2433 unknown function unknown function 1 57376 58065
ASW31814.1 MF140406_p67 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44581 47205
ASW31761.1 MF140406_p14 head-to-tail connector protein phrog_387 neck protein connector 1 9687 9968
ASW31773.1 MF140406_p26 hypothetical protein phrog_416 minor tail protein tail 1 23700 24704
ASW31750.1 MF140406_p3 hypothetical protein phrog_2074 unknown function unknown function 1 416 673
ASW31788.1 MF140406_p41 integrase phrog_1 integrase integration and excision 1 33018 34286
ASW31798.1 MF140406_p51 HTH DNA binding protein phrog_2286 unknown function unknown function 1 37659 38447
ASW31797.1 MF140406_p50 hypothetical protein phrog_3903 unknown function unknown function 1 37405 37662
ASW31807.1 MF140406_p60 hypothetical protein phrog_3492 unknown function unknown function 1 42298 42603
ASW31805.1 MF140406_p58 hypothetical protein phrog_2870 unknown function unknown function 1 41139 41435
ASW31769.1 MF140406_p22 minor tail protein phrog_1697 minor tail protein tail 1 19344 19838
ASW31835.1 MF140406_p88 hypothetical protein phrog_30522 unknown function unknown function 1 58184 58864
ASW31828.1 MF140406_p81 hypothetical protein phrog_19138 unknown function unknown function 1 54010 54303
ASW31809.1 MF140406_p62 hypothetical protein phrog_1581 unknown function unknown function 1 42936 43148
ASW31820.1 MF140406_p73 hypothetical protein phrog_21827 membrane protein moron, auxiliary metabolic gene and host takeover 1 50701 51027
ASW31826.1 MF140406_p79 hypothetical protein phrog_5288 unknown function unknown function 1 53530 53793
ASW31759.1 MF140406_p12 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8913 9299
ASW31829.1 MF140406_p82 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54404 55594
ASW31780.1 MF140406_p33 endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28677 29810
ASW31839.1 MF140406_p92 hypothetical protein phrog_747 unknown function unknown function 1 60654 60968
ASW31783.1 MF140406_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30641 30931
ASW31804.1 MF140406_p57 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40588 41142
ASW31840.1 MF140406_p93 hypothetical protein phrog_4561 unknown function unknown function 1 60983 61234
ASW31754.1 MF140406_p7 portal protein phrog_104 portal protein head and packaging 1 2823 4376