Genomic map of Arthrobacter phage Elkhorn (MF140409)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140409
Definition
Arthrobacter phage Elkhorn, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Decurrovirus; unclassified Decurrovirus.
DB of origin
NUCCORE
Length
15556
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
26
%GC
59.64
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR83525.1 MF140409_p18 holin phrog_9284 holin lysis 1 12694 12903
ASR83515.1 MF140409_p8 head-to-tail-connector protein phrog_5938 head-tail connector protein connector 1 5293 5649
ASR83509.1 MF140409_p2 hypothetical protein phrog_17346 unknown function unknown function 1 345 560
ASR83508.1 MF140409_p1 hypothetical protein phrog_9475 unknown function unknown function 1 43 348
ASR83532.1 MF140409_p26 HNH endonuclease phrog_5718 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15263 15529
ASR83530.1 MF140409_p23 HTH DNA binding domain protein phrog_8540 replication initiation O-like DNA, RNA and nucleotide metabolism 1 14113 14781
ASR83512.1 MF140409_p5 hypothetical protein phrog_7332 unknown function unknown function 1 2294 2497
ASR83510.1 MF140409_p3 hypothetical protein phrog_10836 unknown function unknown function 1 591 806
ASR83517.1 MF140409_p10 major tail protein phrog_4574 major tail protein tail 1 6013 6435
ASR83526.1 MF140409_p19 hypothetical protein phrog_689 holin lysis 1 12893 13150
ASR83514.1 MF140409_p7 capsid & capsid maturation protease phrog_2263 major head protein head and packaging 1 3706 5289
ASR83511.1 MF140409_p4 terminase phrog_9 terminase large subunit head and packaging 1 800 2290
ASR83533.1 MF140409_p25 hypothetical protein phrog_10672 unknown function unknown function 1 14980 15276
ASR83519.1 MF140409_p12 hypothetical protein phrog_6889 unknown function unknown function 1 6818 7168
ASR83527.1 MF140409_p20 HTH DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 13218 13472
ASR83518.1 MF140409_p11 minor tail protein phrog_5 tail completion or Neck1 protein connector 1 6435 6812
ASR83521.1 MF140409_p14 minor tail protein phrog_10760 minor tail protein tail 1 9270 11087
ASR83516.1 MF140409_p9 hypothetical protein phrog_6768 unknown function unknown function 1 5652 6008
ASR83528.1 MF140409_p21 XRE-like HTH DNA binding protein phrog_3 transcriptional repressor transcription regulation -1 13501 13773
ASR83523.1 MF140409_p16 endolysin phrog_6700 endolysin lysis 1 11607 12056
ASR83524.1 MF140409_p17 N-acetylmuramoyl-L-alanine amidase phrog_4018 amidase lysis 1 12053 12694
ASR83529.1 MF140409_p22 MerR-like HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 13883 14116
ASR83513.1 MF140409_p6 portal protein phrog_12 portal protein head and packaging 1 2549 3709
ASR83520.1 MF140409_p13 tape measure protein phrog_3981 tail length tape measure protein tail 1 7279 9276
ASR83522.1 MF140409_p15 hypothetical protein phrog_10587 unknown function unknown function 1 11092 11610
ASR83531.1 MF140409_p24 hypothetical protein phrog_10694 unknown function unknown function 1 14768 14983