Genomic map of Mycobacterium phage Findley (MF140411)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140411
Definition
Mycobacterium phage Findley, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
58150
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
68.33
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR86748.1 MF140411_p8 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 5349 5891
ASR86812.1 MF140411_p72 DNA primase/helicase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 46856 49405
ASR86810.1 MF140411_p70 hypothetical protein phrog_1091 unknown function unknown function 1 46331 46498
ASR86785.1 MF140411_p45 hypothetical protein phrog_950 unknown function unknown function -1 35737 36585
ASR86792.1 MF140411_p52 hypothetical protein phrog_1622 unknown function unknown function 1 38601 38810
ASR86763.1 MF140411_p23 minor tail protein phrog_746 minor tail protein tail 1 18661 21000
ASR86752.1 MF140411_p12 head-to-tail connector protein phrog_387 neck protein connector 1 7693 7965
ASR86757.1 MF140411_p17 tape measure protein phrog_971 endolysin lysis 1 10116 13787
ASR86809.1 MF140411_p69 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 46086 46331
ASR86788.1 MF140411_p48 excise phrog_1840 excisionase integration and excision 1 37532 37789
ASR86819.1 MF140411_p80 hypothetical protein phrog_14958 unknown function unknown function 1 52783 52920
ASR86775.1 MF140411_p35 DNA binding protein phrog_12831 transcriptional repressor transcription regulation 1 28964 29299
ASR86824.1 MF140411_p85 hypothetical protein phrog_666 unknown function unknown function 1 54892 55113
ASR86789.1 MF140411_p49 hypothetical protein phrog_15371 unknown function unknown function 1 37794 38015
ASR86771.1 MF140411_p31 hypothetical protein phrog_1298 minor tail protein tail 1 26489 26908
ASR86751.1 MF140411_p11 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 7362 7712
ASR86821.1 MF140411_p82 protease phrog_1006 unknown function unknown function 1 53343 53912
ASR86814.1 MF140411_p75 hypothetical protein phrog_17570 unknown function unknown function 1 50501 50815
ASR86807.1 MF140411_p67 hypothetical protein phrog_2388 unknown function unknown function 1 45292 45411
ASR86745.1 MF140411_p5 portal protein phrog_104 portal protein head and packaging 1 2088 3593
ASR86832.1 MF140411_p93 hypothetical protein phrog_15574 unknown function unknown function 1 57544 57714
ASR86799.1 MF140411_p59 hypothetical protein phrog_18188 unknown function unknown function 1 41825 41941
ASR86787.1 MF140411_p47 HTH DNA binding protein phrog_1702 transcriptional repressor transcription regulation 1 37218 37535
ASR86784.1 MF140411_p44 hypothetical protein phrog_27584 unknown function unknown function 1 35436 35678
ASR86815.1 MF140411_p76 hypothetical protein phrog_15365 unknown function unknown function 1 50812 51141
ASR86762.1 MF140411_p22 minor tail protein phrog_1736 minor tail protein tail 1 18423 18677
ASR86756.1 MF140411_p15 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 9253 10115
ASR86761.1 MF140411_p21 minor tail protein phrog_1565 minor tail protein tail 1 17342 18418
ASR86780.1 MF140411_p40 hypothetical protein phrog_806 unknown function unknown function -1 31487 32050
ASR86822.1 MF140411_p83 HTH DNA binding protein phrog_2342 unknown function unknown function 1 53952 54740
ASR86783.1 MF140411_p43 integrase phrog_1 integrase integration and excision 1 34310 35410
ASR86769.1 MF140411_p29 lysin B phrog_102 endolysin lysis 1 24799 26001
ASR86793.1 MF140411_p53 HTH DNA binding protein phrog_2286 unknown function unknown function 1 38815 39555
ASR86828.1 MF140411_p89 hypothetical protein phrog_15374 unknown function unknown function 1 56481 56810
ASR86796.1 MF140411_p56 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 40537 41169
ASR86746.1 MF140411_p6 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 3574 5094
ASR86797.1 MF140411_p57 hypothetical protein phrog_3186 unknown function unknown function 1 41162 41557
ASR86759.1 MF140411_p19 minor tail protein phrog_110 minor tail protein tail 1 15016 16785
ASR86743.1 MF140411_p3 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 426 674
ASR86776.1 MF140411_p36 HTH DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29430 29834
ASR86823.1 MF140411_p84 hypothetical protein phrog_25972 unknown function unknown function 1 54737 54898
ASR86805.1 MF140411_p65 hypothetical protein phrog_14762 unknown function unknown function 1 44711 45031
ASR86779.1 MF140411_p39 hypothetical protein phrog_549 unknown function unknown function -1 31107 31490
ASR86806.1 MF140411_p66 hypothetical protein phrog_5466 unknown function unknown function 1 45028 45237
ASR86770.1 MF140411_p30 holin phrog_565 holin lysis 1 26020 26406
ASR86750.1 MF140411_p10 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6976 7362
ASR86818.1 MF140411_p79 hypothetical protein phrog_1338 unknown function unknown function 1 52491 52760
ASR86791.1 MF140411_p51 hypothetical protein phrog_3903 unknown function unknown function 1 38306 38587
ASR86781.1 MF140411_p41 ssDNA binding protein phrog_4095 unknown function unknown function 1 32188 32886
ASR86747.1 MF140411_p7 hypothetical protein phrog_1757 unknown function unknown function 1 5091 5276
ASR86795.1 MF140411_p55 hydrolase phrog_15484 hydrolase other 1 39782 40540
ASR86834.1 MF140411_p73 hypothetical protein phrog_27140 unknown function unknown function 1 49402 49866
ASR86830.1 MF140411_p91 hypothetical protein phrog_12460 unknown function unknown function 1 56984 57220
ASR86765.1 MF140411_p25 minor tail protein phrog_416 minor tail protein tail 1 21282 22307
ASR86803.1 MF140411_p63 hypothetical protein phrog_15653 unknown function unknown function 1 44229 44405
ASR86794.1 MF140411_p54 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 39552 39785
ASR86829.1 MF140411_p90 hypothetical protein phrog_2057 unknown function unknown function 1 56807 56974
ASR86758.1 MF140411_p18 minor tail protein phrog_106 minor tail protein tail 1 13892 15019
ASR86831.1 MF140411_p92 hypothetical protein phrog_747 unknown function unknown function 1 57233 57529
ASR86744.1 MF140411_p4 terminase large subunit phrog_2 terminase large subunit head and packaging 1 652 2076
ASR86801.1 MF140411_p61 hydrolase phrog_789 esterase/lipase other 1 42554 43378
ASR86773.1 MF140411_p33 hypothetical protein phrog_1738 unknown function unknown function 1 27386 27631
ASR86800.1 MF140411_p60 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 42024 42557
ASR86813.1 MF140411_p74 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 49869 50504
ASR86767.1 MF140411_p27 hypothetical protein phrog_240 head protein head and packaging 1 22704 23072
ASR86760.1 MF140411_p20 minor tail protein phrog_1697 minor tail protein tail 1 16785 17249
ASR86741.1 MF140411_p1 hypothetical protein phrog_5391 unknown function unknown function 1 88 222
ASR86826.1 MF140411_p87 hypothetical protein phrog_26442 unknown function unknown function 1 55732 55971
ASR86820.1 MF140411_p81 hypothetical protein phrog_5546 unknown function unknown function 1 52978 53289
ASR86825.1 MF140411_p86 hypothetical protein phrog_7638 unknown function unknown function 1 55247 55735
ASR86802.1 MF140411_p62 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 43375 44232
ASR86790.1 MF140411_p50 hypothetical protein phrog_2654 unknown function unknown function 1 38091 38309
ASR86833.1 MF140411_p94 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57711 57989
ASR86816.1 MF140411_p77 DNA binding protein phrog_908 unknown function unknown function 1 51134 52036
ASR86777.1 MF140411_p37 hypothetical protein phrog_14992 unknown function unknown function 1 29842 30216
ASR86742.1 MF140411_p2 hypothetical protein phrog_2622 unknown function unknown function 1 224 436
ASR86768.1 MF140411_p28 lysin A phrog_1519 endolysin lysis 1 23102 24793
ASR86804.1 MF140411_p64 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 44402 44620
ASR86774.1 MF140411_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27622 28806
ASR86772.1 MF140411_p32 hypothetical protein phrog_726 unknown function unknown function 1 26898 27389
ASR86808.1 MF140411_p68 hypothetical protein phrog_1911 unknown function unknown function 1 45480 45998
ASR86764.1 MF140411_p24 minor tail protein phrog_3901 unknown function unknown function 1 21001 21282
ASR86798.1 MF140411_p58 hypothetical protein phrog_1956 unknown function unknown function 1 41550 41828
ASR86749.1 MF140411_p9 major capsid protein phrog_10 major head protein head and packaging 1 5947 6864
ASR86778.1 MF140411_p38 hypothetical protein phrog_2433 unknown function unknown function 1 30335 31039
ASR86755.1 MF140411_p16 tail assembly chaperone phrog_1861 unknown function unknown function 1 9253 9702
ASR86827.1 MF140411_p88 hypothetical protein phrog_6135 unknown function unknown function 1 56094 56357
ASR86782.1 MF140411_p42 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 33008 33853
ASR86786.1 MF140411_p46 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36673 37044
ASR86753.1 MF140411_p13 head-to-tail connector protein phrog_123 tail terminator connector 1 7962 8381
ASR86754.1 MF140411_p14 major tail protein phrog_117 major tail protein tail 1 8532 9146
ASR86766.1 MF140411_p26 hypothetical protein phrog_2269 unknown function unknown function 1 22322 22549
ASR86817.1 MF140411_p78 hypothetical protein phrog_6045 unknown function unknown function 1 52105 52494
ASR86811.1 MF140411_p71 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46495 46839