| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140412 |
Definition |
Mycobacterium phage Jeckyll, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
59708 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
96 |
%GC |
66.55 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR86853.1 | MF140412_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11269 | 12116 |
| ASR86880.1 | MF140412_p46 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36310 | 36477 |
| ASR86841.1 | MF140412_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1637 | 3058 |
| ASR86898.1 | MF140412_p64 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43011 | 43520 |
| ASR86910.1 | MF140412_p77 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51409 | 51537 |
| ASR86908.1 | MF140412_p75 | protease | phrog_1006 | unknown function | unknown function | 1 | 50461 | 50922 |
| ASR86926.1 | MF140412_p94 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 58941 | 59171 |
| ASR86911.1 | MF140412_p78 | HTH DNA binding protein | phrog_2342 | unknown function | unknown function | 1 | 51534 | 52436 |
| ASR86896.1 | MF140412_p62 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42595 | 42810 |
| ASR86848.1 | MF140412_p14 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 9404 | 9760 |
| ASR86875.1 | MF140412_p41 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33787 | 34689 |
| ASR86868.1 | MF140412_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28393 | 29601 |
| ASR86837.1 | MF140412_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 476 | 730 |
| ASR86892.1 | MF140412_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40921 | 41253 |
| ASR86839.1 | MF140412_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1230 | 1433 |
| ASR86902.1 | MF140412_p68 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44510 | 47128 |
| ASR86903.1 | MF140412_p70 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47537 | 48235 |
| ASR86844.1 | MF140412_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7135 | 7320 |
| ASR86895.1 | MF140412_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42286 | 42519 |
| ASR86857.1 | MF140412_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18954 | 19430 |
| ASR86861.1 | MF140412_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23356 | 24369 |
| ASR86864.1 | MF140412_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26494 | 27366 |
| ASR86899.1 | MF140412_p65 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43622 | 43864 |
| ASR86918.1 | MF140412_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55137 | 55520 |
| ASR86835.1 | MF140412_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 297 |
| ASR86884.1 | MF140412_p50 | thioredoxin | phrog_2781 | unknown function | unknown function | 1 | 37731 | 38672 |
| ASR86920.1 | MF140412_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56052 | 56624 |
| ASR86859.1 | MF140412_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20603 | 20911 |
| ASR86873.1 | MF140412_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31935 | 32237 |
| ASR86860.1 | MF140412_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20912 | 23344 |
| ASR86867.1 | MF140412_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28155 | 28406 |
| ASR86847.1 | MF140412_p13 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9021 | 9407 |
| ASR86907.1 | MF140412_p74 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50116 | 50388 |
| ASR86850.1 | MF140412_p16 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 10019 | 10444 |
| ASR86882.1 | MF140412_p48 | HTH DNA binding protein | phrog_2286 | unknown function | unknown function | 1 | 36683 | 37474 |
| ASR86866.1 | MF140412_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27814 | 28158 |
| ASR86916.1 | MF140412_p83 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 53680 | 53832 |
| ASR86854.1 | MF140412_p20 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12116 | 15949 |
| ASR86912.1 | MF140412_p79 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52433 | 52909 |
| ASR86887.1 | MF140412_p53 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39233 | 39616 |
| ASR86900.1 | MF140412_p66 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 43861 | 44100 |
| ASR86915.1 | MF140412_p82 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53486 | 53683 |
| ASR86845.1 | MF140412_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7357 | 7899 |
| ASR86836.1 | MF140412_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 294 | 479 |
| ASR86881.1 | MF140412_p47 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36474 | 36686 |
| ASR86927.1 | MF140412_p95 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59168 | 59350 |
| ASR86869.1 | MF140412_p35 | HTH DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29794 | 30225 |
| ASR86929.1 | MF140412_p93 | hypothetical protein | phrog_13379 | unknown function | unknown function | 1 | 58598 | 58960 |
| ASR86901.1 | MF140412_p67 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44097 | 44468 |
| ASR86856.1 | MF140412_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17188 | 18954 |
| ASR86879.1 | MF140412_p45 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35781 | 36131 |
| ASR86838.1 | MF140412_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 727 | 963 |
| ASR86922.1 | MF140412_p89 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 56954 | 57580 |
| ASR86897.1 | MF140412_p63 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42810 | 42929 |
| ASR86849.1 | MF140412_p15 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9741 | 10022 |
| ASR86894.1 | MF140412_p60 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41411 | 42289 |
| ASR86905.1 | MF140412_p72 | peptidase | phrog_908 | unknown function | unknown function | 1 | 48686 | 49873 |
| ASR86921.1 | MF140412_p88 | HTH DNA binding protein | phrog_3665 | unknown function | unknown function | 1 | 56621 | 56782 |
| ASR86843.1 | MF140412_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4628 | 7138 |
| ASR86904.1 | MF140412_p71 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48228 | 48689 |
| ASR86874.1 | MF140412_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32595 | 33683 |
| ASR86851.1 | MF140412_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10544 | 11155 |
| ASR86883.1 | MF140412_p49 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37471 | 37734 |
| ASR86852.1 | MF140412_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11269 | 11706 |
| ASR86885.1 | MF140412_p51 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38684 | 38854 |
| ASR86871.1 | MF140412_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30661 | 31347 |
| ASR86914.1 | MF140412_p81 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 53184 | 53486 |
| ASR86886.1 | MF140412_p52 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38886 | 39236 |
| ASR86858.1 | MF140412_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19514 | 20596 |
| ASR86889.1 | MF140412_p55 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39892 | 40092 |
| ASR86930.1 | MF140412_p69 | hypothetical protein | phrog_7662 | unknown function | unknown function | 1 | 47128 | 47484 |
| ASR86876.1 | MF140412_p42 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34716 | 35096 |
| ASR86924.1 | MF140412_p91 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 57935 | 58150 |
| ASR86906.1 | MF140412_p73 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 49886 | 50119 |
| ASR86909.1 | MF140412_p76 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51047 | 51322 |
| ASR86917.1 | MF140412_p84 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 53944 | 55137 |
| ASR86919.1 | MF140412_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55520 | 56059 |
| ASR86872.1 | MF140412_p38 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 31463 | 31861 |
| ASR86891.1 | MF140412_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40658 | 40924 |
| ASR86878.1 | MF140412_p44 | HTH DNA binding protein | phrog_1840 | excisionase | integration and excision | 1 | 35513 | 35779 |
| ASR86877.1 | MF140412_p43 | HTH DNA binding domain protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35259 | 35516 |
| ASR86923.1 | MF140412_p90 | HTH DNA binding protein | phrog_5243 | unknown function | unknown function | 1 | 57612 | 57812 |
| ASR86913.1 | MF140412_p80 | hypothetical protein | phrog_5794 | unknown function | unknown function | 1 | 52906 | 53184 |
| ASR86928.1 | MF140412_p96 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59347 | 59649 |
| ASR86862.1 | MF140412_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24453 | 24824 |
| ASR86888.1 | MF140412_p54 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39617 | 39895 |
| ASR86842.1 | MF140412_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3055 | 4623 |
| ASR86865.1 | MF140412_p31 | holin | phrog_565 | holin | lysis | 1 | 27377 | 27817 |
| ASR86925.1 | MF140412_p92 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58298 | 58567 |
| ASR86840.1 | MF140412_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1426 | 1653 |
| ASR86893.1 | MF140412_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41250 | 41414 |
| ASR86855.1 | MF140412_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16051 | 17187 |
| ASR86846.1 | MF140412_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7974 | 8909 |
| ASR86863.1 | MF140412_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24842 | 26497 |
| ASR86870.1 | MF140412_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30222 | 30584 |
| ASR86890.1 | MF140412_p56 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40104 | 40658 |