Genomic map of Arthrobacter phage Nightmare (MF140423)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140423
Definition
Arthrobacter phage Nightmare, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus.
DB of origin
NUCCORE
Length
58839
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
49.85
Number of singletons
3
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASM62350.1 MF140423_p77 HNH endonuclease domain protein phrog_6086 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50946 51422
ASM62280.1 MF140423_p4 hypothetical protein phrog_34536 unknown function unknown function 1 2507 2674
ASM62323.1 MF140423_p47 hypothetical protein phrog_7539 unknown function unknown function 1 35063 35362
ASM62342.1 MF140423_p66 hypothetical protein phrog_14697 unknown function unknown function 1 45941 46720
ASM62336.1 MF140423_p60 hypothetical protein phrog_15720 unknown function unknown function 1 43904 44227
ASM62283.1 MF140423_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 3565 5304
ASM62314.1 MF140423_p38 hypothetical protein phrog_15974 unknown function unknown function 1 30507 30695
ASM62346.1 MF140423_p73 ATP-dependent helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 48810 50060
ASM62364.1 MF140423_p92 hypothetical protein phrog_4303 unknown function unknown function 1 58499 58774
ASM62286.1 MF140423_p10 hypothetical protein phrog_14710 unknown function unknown function 1 6757 7338
ASM62293.1 MF140423_p17 major tail protein phrog_2645 major tail protein tail 1 12359 13231
ASM62308.1 MF140423_p32 hypothetical protein phrog_8599 unknown function unknown function 1 28127 28570
ASM62328.1 MF140423_p52 hypothetical protein phrog_15163 unknown function unknown function 1 36691 36861
ASM62326.1 MF140423_p50 hypothetical protein phrog_8761 unknown function unknown function 1 35895 36020
ASM62330.1 MF140423_p54 hypothetical protein phrog_2152 unknown function unknown function 1 37048 37980
ASM62347.1 MF140423_p74 hypothetical protein phrog_18472 unknown function unknown function 1 50029 50514
ASM62362.1 MF140423_p90 RecB-like exonuclease phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 55192 55752
ASM62320.1 MF140423_p44 hypothetical protein phrog_20027 unknown function unknown function 1 33399 33836
ASM62358.1 MF140423_p85 hypothetical protein phrog_37346 unknown function unknown function 1 53443 53676
ASM62331.1 MF140423_p55 hypothetical protein phrog_26876 unknown function unknown function 1 38169 38321
ASM62289.1 MF140423_p13 portal protein phrog_12 portal protein head and packaging 1 8300 9553
ASM62294.1 MF140423_p18 hypothetical protein phrog_4338 unknown function unknown function 1 13257 13814
ASM62313.1 MF140423_p37 hypothetical protein phrog_15466 unknown function unknown function 1 30104 30418
ASM62298.1 MF140423_p22 tail protein phrog_17931 tail protein tail 1 17365 18183
ASM62317.1 MF140423_p41 hypothetical protein phrog_2152 unknown function unknown function 1 31748 32509
ASM62312.1 MF140423_p36 hypothetical protein phrog_38829 unknown function unknown function 1 29779 30027
ASM62329.1 MF140423_p53 hypothetical protein phrog_6038 unknown function unknown function 1 36871 37005
ASM62281.1 MF140423_p5 hypothetical protein phrog_4247 virion structural protein head and packaging 1 2671 3072
ASM62351.1 MF140423_p78 HNH endonuclease phrog_6086 HNH endonuclease DNA, RNA and nucleotide metabolism 1 51419 51631
ASM62292.1 MF140423_p16 hypothetical protein phrog_78 tail terminator connector 1 12048 12347
ASM62349.1 MF140423_p76 hypothetical protein phrog_16630 unknown function unknown function 1 50651 50932
ASM62361.1 MF140423_p88 hypothetical protein phrog_14828 unknown function unknown function 1 54136 54474
ASM62321.1 MF140423_p45 hypothetical protein phrog_25617 unknown function unknown function 1 33839 34183
ASM62324.1 MF140423_p48 hypothetical protein phrog_18143 unknown function unknown function 1 35430 35639
ASM62340.1 MF140423_p64 hypothetical protein phrog_8423 unknown function unknown function 1 45339 45629
ASM62296.1 MF140423_p20 minor tail protein phrog_9116 tail protein tail 1 14641 16005
ASM62288.1 MF140423_p12 hypothetical protein phrog_6291 unknown function unknown function 1 7725 8261
ASM62287.1 MF140423_p11 hypothetical protein phrog_14126 unknown function unknown function 1 7342 7722
ASM62303.1 MF140423_p27 tape measure protein phrog_4372 tail length tape measure protein tail 1 20521 25113
ASM62325.1 MF140423_p49 hypothetical protein phrog_18839 unknown function unknown function 1 35641 35892
ASM62310.1 MF140423_p34 hypothetical protein phrog_9233 holin lysis 1 28878 29270
ASM62363.1 MF140423_p91 HTH DNA binding domain protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 55749 58502
ASM62315.1 MF140423_p39 hypothetical protein phrog_6618 unknown function unknown function 1 30810 31052
ASM62278.1 MF140423_p2 HNH endonuclease domain protein phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1128 1535
ASM62322.1 MF140423_p46 hypothetical protein phrog_4282 unknown function unknown function 1 34312 34971
ASM62295.1 MF140423_p19 major tail protein phrog_2645 major tail protein tail 1 13828 14628
ASM62339.1 MF140423_p63 hypothetical protein phrog_6363 unknown function unknown function 1 45062 45361
ASM62337.1 MF140423_p61 hypothetical protein phrog_14942 unknown function unknown function 1 44220 44414
ASM62332.1 MF140423_p56 hypothetical protein phrog_4695 unknown function unknown function 1 38318 39076
ASM62352.1 MF140423_p79 hypothetical protein phrog_17863 unknown function unknown function 1 51631 51819
ASM62282.1 MF140423_p6 hypothetical protein phrog_7021 unknown function unknown function 1 3069 3548
ASM62360.1 MF140423_p87 hypothetical protein phrog_27968 unknown function unknown function 1 53917 54135
ASM62297.1 MF140423_p21 minor tail protein phrog_9116 tail protein tail 1 16021 17352
ASM62291.1 MF140423_p15 hypothetical protein phrog_4270 unknown function unknown function 1 11738 12073
ASM62366.1 MF140423_p71 hypothetical protein phrog_14700 unknown function unknown function 1 48297 48647
ASM62338.1 MF140423_p62 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 44420 44995
ASM62367.1 MF140423_p72 hypothetical protein singleton unknown function unknown function 1 48635 48880
ASM62368.1 MF140423_p89 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 54909 55247
ASM62306.1 MF140423_p30 hypothetical protein phrog_9081 unknown function unknown function 1 27103 27342
ASM62344.1 MF140423_p69 hypothetical protein phrog_15335 unknown function unknown function 1 47250 47453
ASM62299.1 MF140423_p23 hypothetical protein phrog_3971 unknown function unknown function 1 18210 19145
ASM62356.1 MF140423_p83 hypothetical protein phrog_14862 unknown function unknown function 1 52529 53017
ASM62309.1 MF140423_p33 hypothetical protein phrog_7656 unknown function unknown function 1 28570 28875
ASM62284.1 MF140423_p8 hypothetical protein phrog_38171 unknown function unknown function 1 5301 5912
ASM62354.1 MF140423_p81 hypothetical protein phrog_16421 unknown function unknown function 1 52046 52324
ASM62277.1 MF140423_p1 hypothetical protein phrog_4259 unknown function unknown function 1 767 1135
ASM62279.1 MF140423_p3 lysin A phrog_7698 endolysin lysis 1 1557 2510
ASM62359.1 MF140423_p86 hypothetical protein phrog_15031 unknown function unknown function 1 53676 53924
ASM62290.1 MF140423_p14 capsid & capsid maturation protease phrog_3270 head maturation protease head and packaging 1 9575 11731
ASM62345.1 MF140423_p70 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47676 48179
ASM62300.1 MF140423_p24 hypothetical protein phrog_3971 unknown function unknown function 1 19157 19975
ASM62316.1 MF140423_p40 hypothetical protein singleton unknown function unknown function 1 31142 31351
ASM62307.1 MF140423_p31 minor tail protein phrog_6977 minor tail protein tail 1 27342 28130
ASM62285.1 MF140423_p9 hypothetical protein phrog_7502 unknown function unknown function 1 5909 6760
ASM62318.1 MF140423_p42 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 32534 33052
ASM62343.1 MF140423_p67 hypothetical protein phrog_6363 unknown function unknown function 1 46698 46961
ASM62335.1 MF140423_p59 hypothetical protein phrog_15586 unknown function unknown function 1 43673 43897
ASM62357.1 MF140423_p84 hypothetical protein phrog_11305 unknown function unknown function 1 52989 53279
ASM62301.1 MF140423_p25 hypothetical protein phrog_14645 unknown function unknown function 1 19984 20118
ASM62353.1 MF140423_p80 hypothetical protein phrog_28463 unknown function unknown function 1 51816 52049
ASM62333.1 MF140423_p57 hypothetical protein phrog_4678 unknown function unknown function 1 39081 39638
ASM62334.1 MF140423_p58 DNA primase/polymerase phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 39662 43600
ASM62341.1 MF140423_p65 hypothetical protein phrog_15961 unknown function unknown function 1 45626 45940
ASM62305.1 MF140423_p29 minor tail protein phrog_538 minor tail protein tail 1 25921 27081
ASM62304.1 MF140423_p28 minor tail protein phrog_33 distal tail protein Dit tail 1 25103 25921
ASM62348.1 MF140423_p75 hypothetical protein phrog_21246 unknown function unknown function 1 50514 50648
ASM62319.1 MF140423_p43 hypothetical protein phrog_15880 unknown function unknown function 1 33078 33323
ASM62365.1 MF140423_p68 hypothetical protein phrog_20572 unknown function unknown function 1 46969 47214
ASM62311.1 MF140423_p35 hypothetical protein phrog_5818 unknown function unknown function 1 29329 29625
ASM62302.1 MF140423_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20141 20524
ASM62355.1 MF140423_p82 hypothetical protein singleton unknown function unknown function 1 52321 52485
ASM62327.1 MF140423_p51 hypothetical protein phrog_4079 unknown function unknown function 1 36046 36684