| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140423 |
Definition |
Arthrobacter phage Nightmare, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus. |
DB of origin |
NUCCORE |
Length |
58839 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
49.85 |
Number of singletons |
3 |
Number of paralogs |
6 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASM62350.1 | MF140423_p77 | HNH endonuclease domain protein | phrog_6086 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 50946 | 51422 |
| ASM62280.1 | MF140423_p4 | hypothetical protein | phrog_34536 | unknown function | unknown function | 1 | 2507 | 2674 |
| ASM62323.1 | MF140423_p47 | hypothetical protein | phrog_7539 | unknown function | unknown function | 1 | 35063 | 35362 |
| ASM62342.1 | MF140423_p66 | hypothetical protein | phrog_14697 | unknown function | unknown function | 1 | 45941 | 46720 |
| ASM62336.1 | MF140423_p60 | hypothetical protein | phrog_15720 | unknown function | unknown function | 1 | 43904 | 44227 |
| ASM62283.1 | MF140423_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 3565 | 5304 |
| ASM62314.1 | MF140423_p38 | hypothetical protein | phrog_15974 | unknown function | unknown function | 1 | 30507 | 30695 |
| ASM62346.1 | MF140423_p73 | ATP-dependent helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 48810 | 50060 |
| ASM62364.1 | MF140423_p92 | hypothetical protein | phrog_4303 | unknown function | unknown function | 1 | 58499 | 58774 |
| ASM62286.1 | MF140423_p10 | hypothetical protein | phrog_14710 | unknown function | unknown function | 1 | 6757 | 7338 |
| ASM62293.1 | MF140423_p17 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 12359 | 13231 |
| ASM62308.1 | MF140423_p32 | hypothetical protein | phrog_8599 | unknown function | unknown function | 1 | 28127 | 28570 |
| ASM62328.1 | MF140423_p52 | hypothetical protein | phrog_15163 | unknown function | unknown function | 1 | 36691 | 36861 |
| ASM62326.1 | MF140423_p50 | hypothetical protein | phrog_8761 | unknown function | unknown function | 1 | 35895 | 36020 |
| ASM62330.1 | MF140423_p54 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 37048 | 37980 |
| ASM62347.1 | MF140423_p74 | hypothetical protein | phrog_18472 | unknown function | unknown function | 1 | 50029 | 50514 |
| ASM62362.1 | MF140423_p90 | RecB-like exonuclease | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 55192 | 55752 |
| ASM62320.1 | MF140423_p44 | hypothetical protein | phrog_20027 | unknown function | unknown function | 1 | 33399 | 33836 |
| ASM62358.1 | MF140423_p85 | hypothetical protein | phrog_37346 | unknown function | unknown function | 1 | 53443 | 53676 |
| ASM62331.1 | MF140423_p55 | hypothetical protein | phrog_26876 | unknown function | unknown function | 1 | 38169 | 38321 |
| ASM62289.1 | MF140423_p13 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 8300 | 9553 |
| ASM62294.1 | MF140423_p18 | hypothetical protein | phrog_4338 | unknown function | unknown function | 1 | 13257 | 13814 |
| ASM62313.1 | MF140423_p37 | hypothetical protein | phrog_15466 | unknown function | unknown function | 1 | 30104 | 30418 |
| ASM62298.1 | MF140423_p22 | tail protein | phrog_17931 | tail protein | tail | 1 | 17365 | 18183 |
| ASM62317.1 | MF140423_p41 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 31748 | 32509 |
| ASM62312.1 | MF140423_p36 | hypothetical protein | phrog_38829 | unknown function | unknown function | 1 | 29779 | 30027 |
| ASM62329.1 | MF140423_p53 | hypothetical protein | phrog_6038 | unknown function | unknown function | 1 | 36871 | 37005 |
| ASM62281.1 | MF140423_p5 | hypothetical protein | phrog_4247 | virion structural protein | head and packaging | 1 | 2671 | 3072 |
| ASM62351.1 | MF140423_p78 | HNH endonuclease | phrog_6086 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51419 | 51631 |
| ASM62292.1 | MF140423_p16 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 12048 | 12347 |
| ASM62349.1 | MF140423_p76 | hypothetical protein | phrog_16630 | unknown function | unknown function | 1 | 50651 | 50932 |
| ASM62361.1 | MF140423_p88 | hypothetical protein | phrog_14828 | unknown function | unknown function | 1 | 54136 | 54474 |
| ASM62321.1 | MF140423_p45 | hypothetical protein | phrog_25617 | unknown function | unknown function | 1 | 33839 | 34183 |
| ASM62324.1 | MF140423_p48 | hypothetical protein | phrog_18143 | unknown function | unknown function | 1 | 35430 | 35639 |
| ASM62340.1 | MF140423_p64 | hypothetical protein | phrog_8423 | unknown function | unknown function | 1 | 45339 | 45629 |
| ASM62296.1 | MF140423_p20 | minor tail protein | phrog_9116 | tail protein | tail | 1 | 14641 | 16005 |
| ASM62288.1 | MF140423_p12 | hypothetical protein | phrog_6291 | unknown function | unknown function | 1 | 7725 | 8261 |
| ASM62287.1 | MF140423_p11 | hypothetical protein | phrog_14126 | unknown function | unknown function | 1 | 7342 | 7722 |
| ASM62303.1 | MF140423_p27 | tape measure protein | phrog_4372 | tail length tape measure protein | tail | 1 | 20521 | 25113 |
| ASM62325.1 | MF140423_p49 | hypothetical protein | phrog_18839 | unknown function | unknown function | 1 | 35641 | 35892 |
| ASM62310.1 | MF140423_p34 | hypothetical protein | phrog_9233 | holin | lysis | 1 | 28878 | 29270 |
| ASM62363.1 | MF140423_p91 | HTH DNA binding domain protein | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 55749 | 58502 |
| ASM62315.1 | MF140423_p39 | hypothetical protein | phrog_6618 | unknown function | unknown function | 1 | 30810 | 31052 |
| ASM62278.1 | MF140423_p2 | HNH endonuclease domain protein | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1128 | 1535 |
| ASM62322.1 | MF140423_p46 | hypothetical protein | phrog_4282 | unknown function | unknown function | 1 | 34312 | 34971 |
| ASM62295.1 | MF140423_p19 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 13828 | 14628 |
| ASM62339.1 | MF140423_p63 | hypothetical protein | phrog_6363 | unknown function | unknown function | 1 | 45062 | 45361 |
| ASM62337.1 | MF140423_p61 | hypothetical protein | phrog_14942 | unknown function | unknown function | 1 | 44220 | 44414 |
| ASM62332.1 | MF140423_p56 | hypothetical protein | phrog_4695 | unknown function | unknown function | 1 | 38318 | 39076 |
| ASM62352.1 | MF140423_p79 | hypothetical protein | phrog_17863 | unknown function | unknown function | 1 | 51631 | 51819 |
| ASM62282.1 | MF140423_p6 | hypothetical protein | phrog_7021 | unknown function | unknown function | 1 | 3069 | 3548 |
| ASM62360.1 | MF140423_p87 | hypothetical protein | phrog_27968 | unknown function | unknown function | 1 | 53917 | 54135 |
| ASM62297.1 | MF140423_p21 | minor tail protein | phrog_9116 | tail protein | tail | 1 | 16021 | 17352 |
| ASM62291.1 | MF140423_p15 | hypothetical protein | phrog_4270 | unknown function | unknown function | 1 | 11738 | 12073 |
| ASM62366.1 | MF140423_p71 | hypothetical protein | phrog_14700 | unknown function | unknown function | 1 | 48297 | 48647 |
| ASM62338.1 | MF140423_p62 | hypothetical protein | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44420 | 44995 |
| ASM62367.1 | MF140423_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48635 | 48880 |
| ASM62368.1 | MF140423_p89 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54909 | 55247 |
| ASM62306.1 | MF140423_p30 | hypothetical protein | phrog_9081 | unknown function | unknown function | 1 | 27103 | 27342 |
| ASM62344.1 | MF140423_p69 | hypothetical protein | phrog_15335 | unknown function | unknown function | 1 | 47250 | 47453 |
| ASM62299.1 | MF140423_p23 | hypothetical protein | phrog_3971 | unknown function | unknown function | 1 | 18210 | 19145 |
| ASM62356.1 | MF140423_p83 | hypothetical protein | phrog_14862 | unknown function | unknown function | 1 | 52529 | 53017 |
| ASM62309.1 | MF140423_p33 | hypothetical protein | phrog_7656 | unknown function | unknown function | 1 | 28570 | 28875 |
| ASM62284.1 | MF140423_p8 | hypothetical protein | phrog_38171 | unknown function | unknown function | 1 | 5301 | 5912 |
| ASM62354.1 | MF140423_p81 | hypothetical protein | phrog_16421 | unknown function | unknown function | 1 | 52046 | 52324 |
| ASM62277.1 | MF140423_p1 | hypothetical protein | phrog_4259 | unknown function | unknown function | 1 | 767 | 1135 |
| ASM62279.1 | MF140423_p3 | lysin A | phrog_7698 | endolysin | lysis | 1 | 1557 | 2510 |
| ASM62359.1 | MF140423_p86 | hypothetical protein | phrog_15031 | unknown function | unknown function | 1 | 53676 | 53924 |
| ASM62290.1 | MF140423_p14 | capsid & capsid maturation protease | phrog_3270 | head maturation protease | head and packaging | 1 | 9575 | 11731 |
| ASM62345.1 | MF140423_p70 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47676 | 48179 |
| ASM62300.1 | MF140423_p24 | hypothetical protein | phrog_3971 | unknown function | unknown function | 1 | 19157 | 19975 |
| ASM62316.1 | MF140423_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31142 | 31351 |
| ASM62307.1 | MF140423_p31 | minor tail protein | phrog_6977 | minor tail protein | tail | 1 | 27342 | 28130 |
| ASM62285.1 | MF140423_p9 | hypothetical protein | phrog_7502 | unknown function | unknown function | 1 | 5909 | 6760 |
| ASM62318.1 | MF140423_p42 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 32534 | 33052 |
| ASM62343.1 | MF140423_p67 | hypothetical protein | phrog_6363 | unknown function | unknown function | 1 | 46698 | 46961 |
| ASM62335.1 | MF140423_p59 | hypothetical protein | phrog_15586 | unknown function | unknown function | 1 | 43673 | 43897 |
| ASM62357.1 | MF140423_p84 | hypothetical protein | phrog_11305 | unknown function | unknown function | 1 | 52989 | 53279 |
| ASM62301.1 | MF140423_p25 | hypothetical protein | phrog_14645 | unknown function | unknown function | 1 | 19984 | 20118 |
| ASM62353.1 | MF140423_p80 | hypothetical protein | phrog_28463 | unknown function | unknown function | 1 | 51816 | 52049 |
| ASM62333.1 | MF140423_p57 | hypothetical protein | phrog_4678 | unknown function | unknown function | 1 | 39081 | 39638 |
| ASM62334.1 | MF140423_p58 | DNA primase/polymerase | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 39662 | 43600 |
| ASM62341.1 | MF140423_p65 | hypothetical protein | phrog_15961 | unknown function | unknown function | 1 | 45626 | 45940 |
| ASM62305.1 | MF140423_p29 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 25921 | 27081 |
| ASM62304.1 | MF140423_p28 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25103 | 25921 |
| ASM62348.1 | MF140423_p75 | hypothetical protein | phrog_21246 | unknown function | unknown function | 1 | 50514 | 50648 |
| ASM62319.1 | MF140423_p43 | hypothetical protein | phrog_15880 | unknown function | unknown function | 1 | 33078 | 33323 |
| ASM62365.1 | MF140423_p68 | hypothetical protein | phrog_20572 | unknown function | unknown function | 1 | 46969 | 47214 |
| ASM62311.1 | MF140423_p35 | hypothetical protein | phrog_5818 | unknown function | unknown function | 1 | 29329 | 29625 |
| ASM62302.1 | MF140423_p26 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20141 | 20524 |
| ASM62355.1 | MF140423_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52321 | 52485 |
| ASM62327.1 | MF140423_p51 | hypothetical protein | phrog_4079 | unknown function | unknown function | 1 | 36046 | 36684 |