| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140427 |
Definition |
Arthrobacter phage Shrooms, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus. |
DB of origin |
NUCCORE |
Length |
59707 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
64.49 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR83919.1 | MF140427_p38 | hypothetical protein | phrog_15842 | unknown function | unknown function | 1 | 24850 | 25353 |
| ASR83901.1 | MF140427_p20 | hypothetical protein | phrog_21351 | unknown function | unknown function | 1 | 16017 | 16466 |
| ASR83945.1 | MF140427_p66 | minor tail protein | phrog_14138 | minor tail protein | tail | 1 | 37884 | 39941 |
| ASR83978.1 | MF140427_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27240 | 27368 |
| ASR83957.1 | MF140427_p78 | hypothetical protein | phrog_15794 | unknown function | unknown function | -1 | 45636 | 46106 |
| ASR83924.1 | MF140427_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26503 | 26676 |
| ASR83980.1 | MF140427_p64 | tail assembly chaperone | phrog_344 | tail assembly chaperone | tail | 1 | 33728 | 34297 |
| ASR83888.1 | MF140427_p7 | ParB-like domain protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 5048 | 5605 |
| ASR83911.1 | MF140427_p30 | hypothetical protein | phrog_2595 | head-tail connector protein | connector | 1 | 21318 | 21758 |
| ASR83920.1 | MF140427_p39 | hypothetical protein | phrog_15272 | unknown function | unknown function | 1 | 25340 | 25864 |
| ASR83909.1 | MF140427_p28 | hypothetical protein | phrog_16085 | unknown function | unknown function | 1 | 20600 | 20923 |
| ASR83973.1 | MF140427_p94 | hypothetical protein | phrog_23786 | unknown function | unknown function | 1 | 56257 | 56454 |
| ASR83951.1 | MF140427_p72 | hypothetical protein | phrog_15044 | unknown function | unknown function | 1 | 43686 | 44045 |
| ASR83921.1 | MF140427_p40 | hypothetical protein | phrog_19533 | unknown function | unknown function | 1 | 25861 | 26040 |
| ASR83966.1 | MF140427_p87 | HTH DNA binding domain protein | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 51343 | 52269 |
| ASR83891.1 | MF140427_p10 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 6730 | 8352 |
| ASR83883.1 | MF140427_p2 | ParB-like nuclease domain protein | phrog_8071 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 226 | 1422 |
| ASR83917.1 | MF140427_p36 | hypothetical protein | phrog_16208 | unknown function | unknown function | 1 | 24029 | 24208 |
| ASR83939.1 | MF140427_p59 | hypothetical protein | phrog_4754 | unknown function | unknown function | 1 | 31690 | 31962 |
| ASR83885.1 | MF140427_p4 | hypothetical protein | phrog_16093 | unknown function | unknown function | 1 | 1712 | 3259 |
| ASR83952.1 | MF140427_p73 | hypothetical protein | phrog_14111 | unknown function | unknown function | 1 | 44046 | 44342 |
| ASR83941.1 | MF140427_p61 | hypothetical protein | phrog_7924 | unknown function | unknown function | 1 | 32354 | 32497 |
| ASR83962.1 | MF140427_p83 | ATPase | phrog_1366 | unknown function | unknown function | 1 | 49336 | 50436 |
| ASR83959.1 | MF140427_p80 | tail sheath protein | phrog_13150 | tail protein | tail | -1 | 46517 | 47635 |
| ASR83932.1 | MF140427_p52 | hypothetical protein | phrog_15501 | unknown function | unknown function | 1 | 28861 | 29079 |
| ASR83954.1 | MF140427_p75 | hypothetical protein | phrog_15634 | unknown function | unknown function | -1 | 44614 | 44994 |
| ASR83918.1 | MF140427_p37 | hypothetical protein | phrog_16288 | unknown function | unknown function | 1 | 24646 | 24840 |
| ASR83906.1 | MF140427_p25 | major capsid protein | phrog_1005 | major head protein | head and packaging | 1 | 18889 | 19848 |
| ASR83889.1 | MF140427_p8 | methyltransferase | phrog_11826 | methyltransferase | other | 1 | 5589 | 6167 |
| ASR83926.1 | MF140427_p45 | hypothetical protein | phrog_16504 | unknown function | unknown function | 1 | 26915 | 27130 |
| ASR83955.1 | MF140427_p76 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 44991 | 45176 |
| ASR83900.1 | MF140427_p19 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15569 | 15937 |
| ASR83923.1 | MF140427_p42 | hypothetical protein | phrog_14681 | unknown function | unknown function | 1 | 26243 | 26503 |
| ASR83887.1 | MF140427_p6 | PAPs reductase | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 3960 | 5051 |
| ASR83944.1 | MF140427_p65 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 34492 | 37881 |
| ASR83942.1 | MF140427_p62 | major tail protein | phrog_9522 | major tail protein | tail | 1 | 32497 | 33246 |
| ASR83977.1 | MF140427_p98 | glutamine amidotransferase domain protein | phrog_14519 | glutamine amidotransferase | moron, auxiliary metabolic gene and host takeover | 1 | 58690 | 59631 |
| ASR83979.1 | MF140427_p1 | hypothetical protein | phrog_16392 | unknown function | unknown function | 1 | 95 | 229 |
| ASR83940.1 | MF140427_p60 | hypothetical protein | phrog_14724 | unknown function | unknown function | 1 | 31964 | 32218 |
| ASR83913.1 | MF140427_p32 | hypothetical protein | phrog_14874 | unknown function | unknown function | 1 | 22224 | 22400 |
| ASR83958.1 | MF140427_p79 | HTH DNA binding domain protein | phrog_4629 | HTH DNA binding domain protein | DNA, RNA and nucleotide metabolism | 1 | 46206 | 46436 |
| ASR83910.1 | MF140427_p29 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20923 | 21321 |
| ASR83884.1 | MF140427_p3 | hypothetical protein | phrog_15999 | unknown function | unknown function | 1 | 1419 | 1646 |
| ASR83943.1 | MF140427_p63 | hypothetical protein | phrog_10528 | major tail protein | tail | 1 | 33262 | 33690 |
| ASR83893.1 | MF140427_p12 | hypothetical protein | phrog_15226 | unknown function | unknown function | 1 | 8982 | 9335 |
| ASR83946.1 | MF140427_p67 | minor tail protein | phrog_1887 | tail protein | tail | 1 | 39941 | 41110 |
| ASR83922.1 | MF140427_p41 | hypothetical protein | phrog_16371 | unknown function | unknown function | 1 | 26034 | 26252 |
| ASR83903.1 | MF140427_p22 | RNase | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 16860 | 17489 |
| ASR83897.1 | MF140427_p16 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 11265 | 12710 |
| ASR83933.1 | MF140427_p53 | hypothetical protein | phrog_14856 | unknown function | unknown function | 1 | 29155 | 29385 |
| ASR83912.1 | MF140427_p31 | hypothetical protein | phrog_14954 | unknown function | unknown function | 1 | 21748 | 22041 |
| ASR83948.1 | MF140427_p69 | hypothetical protein | phrog_12910 | unknown function | unknown function | 1 | 42088 | 42774 |
| ASR83938.1 | MF140427_p58 | HTH DNA binding protein | phrog_16014 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31353 | 31553 |
| ASR83965.1 | MF140427_p86 | HTH DNA binding domain protein | phrog_16198 | transcriptional repressor | transcription regulation | 1 | 51074 | 51343 |
| ASR83892.1 | MF140427_p11 | hypothetical protein | phrog_15885 | unknown function | unknown function | 1 | 8522 | 8881 |
| ASR83905.1 | MF140427_p24 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 18477 | 18854 |
| ASR83936.1 | MF140427_p56 | hypothetical protein | phrog_15661 | unknown function | unknown function | 1 | 29953 | 30366 |
| ASR83886.1 | MF140427_p5 | ParB-like nuclease domain protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 3310 | 3960 |
| ASR83925.1 | MF140427_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26673 | 26855 |
| ASR83971.1 | MF140427_p92 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 53698 | 54537 |
| ASR83894.1 | MF140427_p13 | hypothetical protein | phrog_16457 | unknown function | unknown function | 1 | 9332 | 9676 |
| ASR83929.1 | MF140427_p49 | hypothetical protein | phrog_33088 | unknown function | unknown function | 1 | 28037 | 28234 |
| ASR83907.1 | MF140427_p26 | hypothetical protein | phrog_15173 | unknown function | unknown function | 1 | 19930 | 20187 |
| ASR83960.1 | MF140427_p81 | lysin A | phrog_1512 | endolysin | lysis | 1 | 47775 | 48680 |
| ASR83914.1 | MF140427_p33 | hypothetical protein | phrog_15995 | unknown function | unknown function | 1 | 22385 | 22717 |
| ASR83931.1 | MF140427_p51 | HTH DNA binding domain protein | phrog_229 | MazG-like pyrophosphatase | other | 1 | 28395 | 28697 |
| ASR83963.1 | MF140427_p84 | HTH DNA binding domain protein | phrog_16411 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 50495 | 50647 |
| ASR83902.1 | MF140427_p21 | hypothetical protein | phrog_16538 | unknown function | unknown function | 1 | 16456 | 16863 |
| ASR83937.1 | MF140427_p57 | hypothetical protein | phrog_15011 | unknown function | unknown function | 1 | 30418 | 31356 |
| ASR83934.1 | MF140427_p54 | hypothetical protein | phrog_19007 | unknown function | unknown function | 1 | 29447 | 29725 |
| ASR83953.1 | MF140427_p74 | hypothetical protein | phrog_14677 | unknown function | unknown function | -1 | 44420 | 44617 |
| ASR83970.1 | MF140427_p91 | hypothetical protein | phrog_16475 | unknown function | unknown function | 1 | 53356 | 53490 |
| ASR83950.1 | MF140427_p71 | hypothetical protein | phrog_12298 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 43231 | 43674 |
| ASR83949.1 | MF140427_p70 | holin | phrog_15431 | holin | lysis | 1 | 42774 | 43223 |
| ASR83961.1 | MF140427_p82 | host nuclease inhibitor | phrog_2205 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 48736 | 49323 |
| ASR83896.1 | MF140427_p15 | hypothetical protein | phrog_14886 | unknown function | unknown function | 1 | 10585 | 11112 |
| ASR83968.1 | MF140427_p89 | HNH endonuclease | phrog_15522 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52679 | 53008 |
| ASR83908.1 | MF140427_p27 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 20191 | 20610 |
| ASR83904.1 | MF140427_p23 | hypothetical protein | phrog_13547 | unknown function | unknown function | 1 | 17661 | 18473 |
| ASR83947.1 | MF140427_p68 | hypothetical protein | phrog_16436 | unknown function | unknown function | 1 | 41098 | 42087 |
| ASR83967.1 | MF140427_p88 | hypothetical protein | phrog_15900 | unknown function | unknown function | 1 | 52287 | 52682 |
| ASR83895.1 | MF140427_p14 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9704 | 10450 |
| ASR83976.1 | MF140427_p97 | amidoligase | phrog_2443 | amidoligase enzyme | other | 1 | 57552 | 58568 |
| ASR83974.1 | MF140427_p95 | hypothetical protein | phrog_15119 | unknown function | unknown function | 1 | 56459 | 56983 |
| ASR83972.1 | MF140427_p93 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 54534 | 56189 |
| ASR83890.1 | MF140427_p9 | HTH DNA binding domain protein | phrog_4102 | terminase small subunit | head and packaging | 1 | 6167 | 6730 |
| ASR83935.1 | MF140427_p55 | hypothetical protein | phrog_15298 | unknown function | unknown function | 1 | 29741 | 29941 |
| ASR83916.1 | MF140427_p35 | hypothetical protein | phrog_14698 | unknown function | unknown function | 1 | 23253 | 24029 |
| ASR83899.1 | MF140427_p18 | aldolase class I | phrog_14859 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 14470 | 15588 |
| ASR83928.1 | MF140427_p48 | hypothetical protein | phrog_28402 | unknown function | unknown function | 1 | 27837 | 28040 |
| ASR83898.1 | MF140427_p17 | capsid maturation protease | phrog_16493 | head maturation protease | head and packaging | 1 | 12685 | 14292 |
| ASR83915.1 | MF140427_p34 | hypothetical protein | phrog_16729 | unknown function | unknown function | 1 | 22717 | 23268 |
| ASR83930.1 | MF140427_p50 | hypothetical protein | phrog_32360 | unknown function | unknown function | 1 | 28231 | 28398 |
| ASR83964.1 | MF140427_p85 | HTH DNA binding domain protein | phrog_15148 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 50820 | 51077 |
| ASR83975.1 | MF140427_p96 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56980 | 57447 |
| ASR83969.1 | MF140427_p90 | HTH DNA binding domain protein | phrog_15152 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 53069 | 53281 |
| ASR83927.1 | MF140427_p47 | hypothetical protein | phrog_36192 | unknown function | unknown function | 1 | 27430 | 27849 |
| ASR83956.1 | MF140427_p77 | hypothetical protein | phrog_16111 | unknown function | unknown function | -1 | 45256 | 45507 |