Genomic map of Mycobacterium phage Slimphazie (MF140428)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF140428
Definition
Mycobacterium phage Slimphazie, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
60143
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
66.61
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR87584.1 MF140428_p71 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47835 48533
ASR87540.1 MF140428_p26 minor tail protein phrog_346 minor tail protein tail 1 20879 23311
ASR87599.1 MF140428_p86 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54386 55573
ASR87566.1 MF140428_p52 hypothetical protein phrog_301 secreted protein other 1 38769 39119
ASR87529.1 MF140428_p15 head-to-tail connector protein phrog_387 neck protein connector 1 9702 9983
ASR87555.1 MF140428_p41 hypothetical protein phrog_950 unknown function unknown function -1 33670 34572
ASR87537.1 MF140428_p23 minor tail protein phrog_1697 minor tail protein tail 1 18921 19397
ASR87531.1 MF140428_p17 major tail subunit phrog_117 major tail protein tail 1 10505 11119
ASR87522.1 MF140428_p8 portal protein phrog_104 portal protein head and packaging 1 3020 4579
ASR87603.1 MF140428_p90 HTH DNA binding protein phrog_3665 unknown function unknown function 1 57045 57206
ASR87570.1 MF140428_p56 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39980 40534
ASR87560.1 MF140428_p46 hypothetical protein phrog_2654 unknown function unknown function 1 36193 36360
ASR87561.1 MF140428_p47 hypothetical protein phrog_3903 unknown function unknown function 1 36357 36569
ASR87587.1 MF140428_p74 peptidase phrog_908 unknown function unknown function 1 49184 50290
ASR87532.1 MF140428_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11233 11670
ASR87536.1 MF140428_p22 minor tail protein phrog_110 minor tail protein tail 1 17155 18921
ASR87609.1 MF140428_p97 hypothetical protein phrog_5633 unknown function unknown function 1 59600 59785
ASR87515.1 MF140428_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
ASR87521.1 MF140428_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1587 3008
ASR87567.1 MF140428_p53 hypothetical protein phrog_3186 unknown function unknown function 1 39116 39496
ASR87517.1 MF140428_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
ASR87592.1 MF140428_p79 hypothetical protein phrog_5776 unknown function unknown function 1 51821 51949
ASR87558.1 MF140428_p44 HTH DNA binding protein phrog_1840 excisionase integration and excision 1 35396 35662
ASR87554.1 MF140428_p40 integrase phrog_1 integrase integration and excision 1 32477 33565
ASR87527.1 MF140428_p13 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8982 9368
ASR87612.1 MF140428_p95 hypothetical protein phrog_13379 unknown function unknown function 1 59033 59395
ASR87582.1 MF140428_p68 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44395 44766
ASR87524.1 MF140428_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7091 7276
ASR87596.1 MF140428_p83 hypothetical protein phrog_35284 unknown function unknown function 1 53599 53934
ASR87591.1 MF140428_p78 hypothetical protein phrog_2974 unknown function unknown function 1 51456 51734
ASR87553.1 MF140428_p39 hypothetical protein phrog_658 unknown function unknown function -1 31817 32119
ASR87610.1 MF140428_p98 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59782 60084
ASR87518.1 MF140428_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 954
ASR87541.1 MF140428_p27 minor tail protein phrog_416 minor tail protein tail 1 23323 24336
ASR87575.1 MF140428_p61 hypothetical protein phrog_3492 unknown function unknown function 1 42159 42353
ASR87605.1 MF140428_p92 HTH DNA binding protein phrog_5243 unknown function unknown function 1 58048 58248
ASR87598.1 MF140428_p85 hypothetical protein phrog_6426 unknown function unknown function 1 54122 54274
ASR87538.1 MF140428_p24 minor tail protein phrog_1565 minor tail protein tail 1 19481 20563
ASR87539.1 MF140428_p25 minor tail protein phrog_1736 minor tail protein tail 1 20570 20878
ASR87593.1 MF140428_p80 HTH DNA binding protein phrog_2342 unknown function unknown function 1 51946 52848
ASR87572.1 MF140428_p58 hypothetical protein phrog_2870 unknown function unknown function 1 40797 41117
ASR87562.1 MF140428_p48 HTH DNA binding protein phrog_2286 unknown function unknown function 1 36566 37357
ASR87595.1 MF140428_p82 hypothetical protein phrog_5794 unknown function unknown function 1 53315 53599
ASR87611.1 MF140428_p70 hypothetical protein phrog_7662 unknown function unknown function 1 47426 47782
ASR87600.1 MF140428_p87 hypothetical protein phrog_3167 unknown function unknown function 1 55573 55947
ASR87516.1 MF140428_p2 hypothetical protein phrog_5284 unknown function unknown function 1 294 479
ASR87533.1 MF140428_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11233 12080
ASR87549.1 MF140428_p35 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29761 30192
ASR87583.1 MF140428_p69 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44808 47426
ASR87576.1 MF140428_p62 hypothetical protein phrog_9435 unknown function unknown function 1 42407 42895
ASR87525.1 MF140428_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7314 7856
ASR87601.1 MF140428_p88 hypothetical protein phrog_2822 unknown function unknown function 1 55947 56486
ASR87579.1 MF140428_p65 hypothetical protein phrog_1911 unknown function unknown function 1 43309 43818
ASR87590.1 MF140428_p77 protease phrog_1006 unknown function unknown function 1 50878 51339
ASR87548.1 MF140428_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28360 29568
ASR87569.1 MF140428_p55 hypothetical protein phrog_4832 unknown function unknown function 1 39772 39969
ASR87534.1 MF140428_p20 tape measure protein phrog_971 endolysin lysis 1 12080 15916
ASR87586.1 MF140428_p73 hypothetical protein phrog_6689 unknown function unknown function 1 48984 49187
ASR87519.1 MF140428_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1180 1383
ASR87528.1 MF140428_p14 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9365 9721
ASR87607.1 MF140428_p94 hypothetical protein phrog_4560 unknown function unknown function 1 58733 59002
ASR87608.1 MF140428_p96 hypothetical protein phrog_4561 unknown function unknown function 1 59376 59606
ASR87545.1 MF140428_p31 holin phrog_565 holin lysis 1 27344 27784
ASR87563.1 MF140428_p49 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 37354 37617
ASR87585.1 MF140428_p72 hypothetical protein phrog_3478 unknown function unknown function 1 48526 48987
ASR87530.1 MF140428_p16 head-to-tail connector protein phrog_123 tail terminator connector 1 9980 10405
ASR87535.1 MF140428_p21 minor tail protein phrog_106 minor tail protein tail 1 16018 17154
ASR87551.1 MF140428_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30543 31229
ASR87544.1 MF140428_p30 lysin B phrog_102 endolysin lysis 1 26461 27333
ASR87542.1 MF140428_p28 hypothetical protein phrog_240 head protein head and packaging 1 24420 24791
ASR87547.1 MF140428_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28122 28373
ASR87594.1 MF140428_p81 hypothetical protein phrog_3868 unknown function unknown function 1 52845 53321
ASR87546.1 MF140428_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27781 28125
ASR87597.1 MF140428_p84 hypothetical protein phrog_666 unknown function unknown function 1 53928 54125
ASR87523.1 MF140428_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4584 7094
ASR87550.1 MF140428_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30177 30467
ASR87564.1 MF140428_p50 hypothetical protein phrog_2781 unknown function unknown function 1 37614 38555
ASR87602.1 MF140428_p89 hypothetical protein phrog_2493 unknown function unknown function 1 56479 57048
ASR87580.1 MF140428_p66 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43920 44162
ASR87588.1 MF140428_p75 hypothetical protein phrog_4269 unknown function unknown function 1 50303 50536
ASR87557.1 MF140428_p43 HTH DNA binding protein phrog_1702 transcriptional repressor transcription regulation 1 35142 35399
ASR87552.1 MF140428_p38 hypothetical protein phrog_7081 unknown function unknown function 1 31345 31743
ASR87556.1 MF140428_p42 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 34599 34979
ASR87571.1 MF140428_p57 hypothetical protein phrog_2596 unknown function unknown function 1 40534 40800
ASR87543.1 MF140428_p29 lysin A phrog_1519 endolysin lysis 1 24809 26464
ASR87604.1 MF140428_p91 hypothetical protein phrog_5812 unknown function unknown function 1 57378 58016
ASR87565.1 MF140428_p51 hypothetical protein phrog_542 unknown function unknown function 1 38567 38737
ASR87573.1 MF140428_p59 hypothetical protein phrog_1498 unknown function unknown function 1 41114 41278
ASR87578.1 MF140428_p64 hypothetical protein phrog_2388 unknown function unknown function 1 43107 43226
ASR87520.1 MF140428_p6 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1376 1603
ASR87568.1 MF140428_p54 hypothetical protein phrog_1956 unknown function unknown function 1 39497 39775
ASR87581.1 MF140428_p67 hypothetical protein phrog_3641 unknown function unknown function 1 44159 44398
ASR87589.1 MF140428_p76 hypothetical protein phrog_1338 unknown function unknown function 1 50533 50805
ASR87577.1 MF140428_p63 hypothetical protein phrog_1581 unknown function unknown function 1 42892 43107
ASR87559.1 MF140428_p45 hypothetical protein phrog_2908 unknown function unknown function 1 35664 36014
ASR87606.1 MF140428_p93 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58370 58585
ASR87574.1 MF140428_p60 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41275 42162
ASR87526.1 MF140428_p12 major capsid protein phrog_10 major head protein head and packaging 1 7932 8870