| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140428 |
Definition |
Mycobacterium phage Slimphazie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
60143 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
66.61 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR87584.1 | MF140428_p71 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47835 | 48533 |
| ASR87540.1 | MF140428_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20879 | 23311 |
| ASR87599.1 | MF140428_p86 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54386 | 55573 |
| ASR87566.1 | MF140428_p52 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38769 | 39119 |
| ASR87529.1 | MF140428_p15 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9702 | 9983 |
| ASR87555.1 | MF140428_p41 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33670 | 34572 |
| ASR87537.1 | MF140428_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18921 | 19397 |
| ASR87531.1 | MF140428_p17 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 10505 | 11119 |
| ASR87522.1 | MF140428_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3020 | 4579 |
| ASR87603.1 | MF140428_p90 | HTH DNA binding protein | phrog_3665 | unknown function | unknown function | 1 | 57045 | 57206 |
| ASR87570.1 | MF140428_p56 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39980 | 40534 |
| ASR87560.1 | MF140428_p46 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36193 | 36360 |
| ASR87561.1 | MF140428_p47 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36357 | 36569 |
| ASR87587.1 | MF140428_p74 | peptidase | phrog_908 | unknown function | unknown function | 1 | 49184 | 50290 |
| ASR87532.1 | MF140428_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11233 | 11670 |
| ASR87536.1 | MF140428_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17155 | 18921 |
| ASR87609.1 | MF140428_p97 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59600 | 59785 |
| ASR87515.1 | MF140428_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 297 |
| ASR87521.1 | MF140428_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1587 | 3008 |
| ASR87567.1 | MF140428_p53 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39116 | 39496 |
| ASR87517.1 | MF140428_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 476 | 730 |
| ASR87592.1 | MF140428_p79 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51821 | 51949 |
| ASR87558.1 | MF140428_p44 | HTH DNA binding protein | phrog_1840 | excisionase | integration and excision | 1 | 35396 | 35662 |
| ASR87554.1 | MF140428_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32477 | 33565 |
| ASR87527.1 | MF140428_p13 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8982 | 9368 |
| ASR87612.1 | MF140428_p95 | hypothetical protein | phrog_13379 | unknown function | unknown function | 1 | 59033 | 59395 |
| ASR87582.1 | MF140428_p68 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44395 | 44766 |
| ASR87524.1 | MF140428_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7091 | 7276 |
| ASR87596.1 | MF140428_p83 | hypothetical protein | phrog_35284 | unknown function | unknown function | 1 | 53599 | 53934 |
| ASR87591.1 | MF140428_p78 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51456 | 51734 |
| ASR87553.1 | MF140428_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31817 | 32119 |
| ASR87610.1 | MF140428_p98 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59782 | 60084 |
| ASR87518.1 | MF140428_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 727 | 954 |
| ASR87541.1 | MF140428_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23323 | 24336 |
| ASR87575.1 | MF140428_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42159 | 42353 |
| ASR87605.1 | MF140428_p92 | HTH DNA binding protein | phrog_5243 | unknown function | unknown function | 1 | 58048 | 58248 |
| ASR87598.1 | MF140428_p85 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 54122 | 54274 |
| ASR87538.1 | MF140428_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19481 | 20563 |
| ASR87539.1 | MF140428_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20570 | 20878 |
| ASR87593.1 | MF140428_p80 | HTH DNA binding protein | phrog_2342 | unknown function | unknown function | 1 | 51946 | 52848 |
| ASR87572.1 | MF140428_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40797 | 41117 |
| ASR87562.1 | MF140428_p48 | HTH DNA binding protein | phrog_2286 | unknown function | unknown function | 1 | 36566 | 37357 |
| ASR87595.1 | MF140428_p82 | hypothetical protein | phrog_5794 | unknown function | unknown function | 1 | 53315 | 53599 |
| ASR87611.1 | MF140428_p70 | hypothetical protein | phrog_7662 | unknown function | unknown function | 1 | 47426 | 47782 |
| ASR87600.1 | MF140428_p87 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55573 | 55947 |
| ASR87516.1 | MF140428_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 294 | 479 |
| ASR87533.1 | MF140428_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11233 | 12080 |
| ASR87549.1 | MF140428_p35 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29761 | 30192 |
| ASR87583.1 | MF140428_p69 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44808 | 47426 |
| ASR87576.1 | MF140428_p62 | hypothetical protein | phrog_9435 | unknown function | unknown function | 1 | 42407 | 42895 |
| ASR87525.1 | MF140428_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7314 | 7856 |
| ASR87601.1 | MF140428_p88 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55947 | 56486 |
| ASR87579.1 | MF140428_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43309 | 43818 |
| ASR87590.1 | MF140428_p77 | protease | phrog_1006 | unknown function | unknown function | 1 | 50878 | 51339 |
| ASR87548.1 | MF140428_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28360 | 29568 |
| ASR87569.1 | MF140428_p55 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39772 | 39969 |
| ASR87534.1 | MF140428_p20 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12080 | 15916 |
| ASR87586.1 | MF140428_p73 | hypothetical protein | phrog_6689 | unknown function | unknown function | 1 | 48984 | 49187 |
| ASR87519.1 | MF140428_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1180 | 1383 |
| ASR87528.1 | MF140428_p14 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 9365 | 9721 |
| ASR87607.1 | MF140428_p94 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58733 | 59002 |
| ASR87608.1 | MF140428_p96 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 59376 | 59606 |
| ASR87545.1 | MF140428_p31 | holin | phrog_565 | holin | lysis | 1 | 27344 | 27784 |
| ASR87563.1 | MF140428_p49 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37354 | 37617 |
| ASR87585.1 | MF140428_p72 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48526 | 48987 |
| ASR87530.1 | MF140428_p16 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 9980 | 10405 |
| ASR87535.1 | MF140428_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16018 | 17154 |
| ASR87551.1 | MF140428_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30543 | 31229 |
| ASR87544.1 | MF140428_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26461 | 27333 |
| ASR87542.1 | MF140428_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24420 | 24791 |
| ASR87547.1 | MF140428_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28122 | 28373 |
| ASR87594.1 | MF140428_p81 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52845 | 53321 |
| ASR87546.1 | MF140428_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27781 | 28125 |
| ASR87597.1 | MF140428_p84 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53928 | 54125 |
| ASR87523.1 | MF140428_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4584 | 7094 |
| ASR87550.1 | MF140428_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30177 | 30467 |
| ASR87564.1 | MF140428_p50 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37614 | 38555 |
| ASR87602.1 | MF140428_p89 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56479 | 57048 |
| ASR87580.1 | MF140428_p66 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43920 | 44162 |
| ASR87588.1 | MF140428_p75 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50303 | 50536 |
| ASR87557.1 | MF140428_p43 | HTH DNA binding protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35142 | 35399 |
| ASR87552.1 | MF140428_p38 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 31345 | 31743 |
| ASR87556.1 | MF140428_p42 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34599 | 34979 |
| ASR87571.1 | MF140428_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40534 | 40800 |
| ASR87543.1 | MF140428_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24809 | 26464 |
| ASR87604.1 | MF140428_p91 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 57378 | 58016 |
| ASR87565.1 | MF140428_p51 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38567 | 38737 |
| ASR87573.1 | MF140428_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41114 | 41278 |
| ASR87578.1 | MF140428_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43107 | 43226 |
| ASR87520.1 | MF140428_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1376 | 1603 |
| ASR87568.1 | MF140428_p54 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39497 | 39775 |
| ASR87581.1 | MF140428_p67 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 44159 | 44398 |
| ASR87589.1 | MF140428_p76 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50533 | 50805 |
| ASR87577.1 | MF140428_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42892 | 43107 |
| ASR87559.1 | MF140428_p45 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35664 | 36014 |
| ASR87606.1 | MF140428_p93 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58370 | 58585 |
| ASR87574.1 | MF140428_p60 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41275 | 42162 |
| ASR87526.1 | MF140428_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7932 | 8870 |