| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140429 |
Definition |
Arthrobacter phage Swenson, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Decurrovirus; unclassified Decurrovirus. |
DB of origin |
NUCCORE |
Length |
15680 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
26 |
%GC |
59.88 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR83989.1 | MF140429_p9 | hypothetical protein | phrog_6768 | unknown function | unknown function | 1 | 5775 | 6131 |
| ASR84005.1 | MF140429_p25 | hypothetical protein | phrog_10672 | unknown function | unknown function | 1 | 15104 | 15400 |
| ASR83985.1 | MF140429_p5 | hypothetical protein | phrog_7332 | unknown function | unknown function | 1 | 2417 | 2620 |
| ASR84001.1 | MF140429_p21 | XRE-like HTH DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 13625 | 13897 |
| ASR83986.1 | MF140429_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2672 | 3832 |
| ASR83997.1 | MF140429_p17 | N-acetylmuramoyl-L-alanine amidase | phrog_4018 | amidase | lysis | 1 | 12177 | 12821 |
| ASR83987.1 | MF140429_p7 | capsid & capsid maturation protease | phrog_2263 | major head protein | head and packaging | 1 | 3829 | 5412 |
| ASR84002.1 | MF140429_p22 | MerR-like HTH DNA binding domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 14007 | 14240 |
| ASR83992.1 | MF140429_p12 | hypothetical protein | phrog_6889 | unknown function | unknown function | 1 | 6942 | 7292 |
| ASR83990.1 | MF140429_p10 | major tail protein | phrog_4574 | major tail protein | tail | 1 | 6137 | 6559 |
| ASR83998.1 | MF140429_p18 | holin | phrog_9284 | holin | lysis | 1 | 12818 | 13027 |
| ASR83993.1 | MF140429_p13 | tape measure protein | phrog_3981 | tail length tape measure protein | tail | 1 | 7403 | 9400 |
| ASR83983.1 | MF140429_p3 | hypothetical protein | phrog_10836 | unknown function | unknown function | 1 | 714 | 929 |
| ASR83996.1 | MF140429_p16 | endolysin | phrog_6700 | endolysin | lysis | 1 | 11731 | 12180 |
| ASR83981.1 | MF140429_p1 | hypothetical protein | phrog_9475 | unknown function | unknown function | 1 | 43 | 348 |
| ASR83984.1 | MF140429_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 923 | 2413 |
| ASR84003.1 | MF140429_p23 | HTH DNA binding protein | phrog_8540 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 14237 | 14905 |
| ASR84006.1 | MF140429_p26 | HNH endonuclease | phrog_5718 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15387 | 15653 |
| ASR83991.1 | MF140429_p11 | minor tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6559 | 6936 |
| ASR84004.1 | MF140429_p24 | hypothetical protein | phrog_10694 | unknown function | unknown function | 1 | 14892 | 15107 |
| ASR83994.1 | MF140429_p14 | minor tail protein | phrog_10760 | minor tail protein | tail | 1 | 9397 | 11211 |
| ASR83982.1 | MF140429_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 345 | 683 |
| ASR83999.1 | MF140429_p19 | hypothetical protein | phrog_689 | holin | lysis | 1 | 13017 | 13274 |
| ASR83988.1 | MF140429_p8 | head-to-tail-connector protein | phrog_5938 | head-tail connector protein | connector | 1 | 5416 | 5772 |
| ASR84000.1 | MF140429_p20 | HTH DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 13342 | 13596 |
| ASR83995.1 | MF140429_p15 | hypothetical protein | phrog_10587 | unknown function | unknown function | 1 | 11216 | 11734 |