| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF140435 |
Definition |
Mycobacterium phage Wintermute, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
58046 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
68.01 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR87756.1 | MF140435_p48 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36563 | 36748 |
| ASR87738.1 | MF140435_p30 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25611 | 25988 |
| ASR87793.1 | MF140435_p85 | hypothetical protein | phrog_7647 | unknown function | unknown function | 1 | 53209 | 53442 |
| ASR87787.1 | MF140435_p79 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 50923 | 51405 |
| ASR87792.1 | MF140435_p84 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52936 | 53106 |
| ASR87757.1 | MF140435_p49 | hypothetical protein | phrog_14099 | unknown function | unknown function | 1 | 36753 | 37013 |
| ASR87737.1 | MF140435_p29 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 24585 | 25589 |
| ASR87758.1 | MF140435_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37057 | 37239 |
| ASR87739.1 | MF140435_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 26019 | 27629 |
| ASR87751.1 | MF140435_p43 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 32920 | 33441 |
| ASR87801.1 | MF140435_p93 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57134 | 57439 |
| ASR87712.1 | MF140435_p4 | hypothetical protein | phrog_5972 | unknown function | unknown function | 1 | 644 | 913 |
| ASR87795.1 | MF140435_p87 | hypothetical protein | phrog_12916 | unknown function | unknown function | 1 | 53794 | 53949 |
| ASR87772.1 | MF140435_p64 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 42011 | 42154 |
| ASR87733.1 | MF140435_p25 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 20410 | 20928 |
| ASR87783.1 | MF140435_p75 | HNH endonuclease | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 48607 | 49083 |
| ASR87722.1 | MF140435_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 9164 | 10093 |
| ASR87796.1 | MF140435_p88 | hypothetical protein | phrog_11871 | unknown function | unknown function | 1 | 53946 | 54311 |
| ASR87709.1 | MF140435_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 116 | 253 |
| ASR87723.1 | MF140435_p15 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10233 | 10607 |
| ASR87750.1 | MF140435_p42 | hypothetical protein | phrog_8324 | unknown function | unknown function | 1 | 32390 | 32821 |
| ASR87754.1 | MF140435_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35828 | 36187 |
| ASR87748.1 | MF140435_p40 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 31709 | 32011 |
| ASR87720.1 | MF140435_p12 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 8244 | 8441 |
| ASR87721.1 | MF140435_p13 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 8533 | 9105 |
| ASR87740.1 | MF140435_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27629 | 28420 |
| ASR87715.1 | MF140435_p7 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1984 | 2223 |
| ASR87769.1 | MF140435_p61 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40391 | 40987 |
| ASR87798.1 | MF140435_p90 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 55255 | 55962 |
| ASR87791.1 | MF140435_p83 | hypothetical protein | phrog_16540 | unknown function | unknown function | 1 | 52562 | 52939 |
| ASR87753.1 | MF140435_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34926 | 35744 |
| ASR87776.1 | MF140435_p68 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 42831 | 43499 |
| ASR87774.1 | MF140435_p66 | hypothetical protein | phrog_12856 | unknown function | unknown function | 1 | 42366 | 42647 |
| ASR87747.1 | MF140435_p39 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 31413 | 31712 |
| ASR87717.1 | MF140435_p9 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 2464 | 3909 |
| ASR87784.1 | MF140435_p76 | hypothetical protein | phrog_12358 | unknown function | unknown function | 1 | 49080 | 49820 |
| ASR87759.1 | MF140435_p51 | hypothetical protein | phrog_11977 | unknown function | unknown function | 1 | 37236 | 37547 |
| ASR87782.1 | MF140435_p74 | hypothetical protein | phrog_10480 | unknown function | unknown function | 1 | 48221 | 48595 |
| ASR87778.1 | MF140435_p70 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43867 | 44712 |
| ASR87788.1 | MF140435_p80 | protease | phrog_1006 | unknown function | unknown function | 1 | 51441 | 52025 |
| ASR87797.1 | MF140435_p89 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 54390 | 55190 |
| ASR87755.1 | MF140435_p47 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36318 | 36566 |
| ASR87730.1 | MF140435_p22 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 13313 | 17488 |
| ASR87800.1 | MF140435_p92 | hypothetical protein | phrog_14339 | unknown function | unknown function | 1 | 56918 | 57130 |
| ASR87768.1 | MF140435_p60 | hypothetical protein | phrog_13940 | unknown function | unknown function | 1 | 40311 | 40394 |
| ASR87727.1 | MF140435_p19 | major tail protein | phrog_117 | major tail protein | tail | 1 | 11716 | 12327 |
| ASR87731.1 | MF140435_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17489 | 18622 |
| ASR87790.1 | MF140435_p82 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 52275 | 52544 |
| ASR87789.1 | MF140435_p81 | hypothetical protein | phrog_14347 | unknown function | unknown function | 1 | 52135 | 52245 |
| ASR87760.1 | MF140435_p52 | hypothetical protein | phrog_12473 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37544 | 37855 |
| ASR87735.1 | MF140435_p27 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 22034 | 22279 |
| ASR87725.1 | MF140435_p17 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 10953 | 11213 |
| ASR87729.1 | MF140435_p20 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 12430 | 13310 |
| ASR87786.1 | MF140435_p78 | hypothetical protein | phrog_12502 | unknown function | unknown function | 1 | 50720 | 50926 |
| ASR87773.1 | MF140435_p65 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42151 | 42369 |
| ASR87718.1 | MF140435_p10 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3921 | 5507 |
| ASR87794.1 | MF140435_p86 | hypothetical protein | phrog_3963 | unknown function | unknown function | 1 | 53471 | 53779 |
| ASR87726.1 | MF140435_p18 | head-to tail connector protein | phrog_123 | tail terminator | connector | 1 | 11210 | 11635 |
| ASR87728.1 | MF140435_p21 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 12430 | 12879 |
| ASR87767.1 | MF140435_p59 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40036 | 40311 |
| ASR87711.1 | MF140435_p3 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 477 | 644 |
| ASR87732.1 | MF140435_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18622 | 20409 |
| ASR87777.1 | MF140435_p69 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43607 | 43870 |
| ASR87802.1 | MF140435_p94 | methyltransferase | phrog_2675 | DNA methyltransferase | other | 1 | 57439 | 58014 |
| ASR87764.1 | MF140435_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 39130 | 39519 |
| ASR87752.1 | MF140435_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 33680 | 34945 |
| ASR87771.1 | MF140435_p63 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41148 | 42011 |
| ASR87741.1 | MF140435_p33 | holin | phrog_565 | holin | lysis | 1 | 28458 | 28856 |
| ASR87745.1 | MF140435_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30625 | 30906 |
| ASR87765.1 | MF140435_p57 | hypothetical protein | phrog_14062 | unknown function | unknown function | 1 | 39516 | 39725 |
| ASR87766.1 | MF140435_p58 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39722 | 39943 |
| ASR87744.1 | MF140435_p36 | phosphoesterase | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29432 | 30622 |
| ASR87716.1 | MF140435_p8 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 2220 | 2492 |
| ASR87710.1 | MF140435_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 250 | 480 |
| ASR87780.1 | MF140435_p72 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44872 | 45252 |
| ASR87799.1 | MF140435_p91 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 56049 | 56747 |
| ASR87736.1 | MF140435_p28 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 22272 | 24581 |
| ASR87785.1 | MF140435_p77 | HTH DNA binding protein | phrog_908 | unknown function | unknown function | 1 | 49845 | 50723 |
| ASR87770.1 | MF140435_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40987 | 41151 |
| ASR87719.1 | MF140435_p11 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 5488 | 8247 |
| ASR87713.1 | MF140435_p5 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 910 | 1272 |
| ASR87724.1 | MF140435_p16 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 10610 | 10966 |
| ASR87761.1 | MF140435_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37848 | 38198 |
| ASR87714.1 | MF140435_p6 | hypothetical protein | phrog_7999 | unknown function | unknown function | 1 | 1272 | 1958 |
| ASR87743.1 | MF140435_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29185 | 29445 |
| ASR87775.1 | MF140435_p67 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42644 | 42760 |
| ASR87734.1 | MF140435_p26 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 20925 | 22022 |
| ASR87763.1 | MF140435_p55 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38441 | 39133 |
| ASR87749.1 | MF140435_p41 | hypothetical protein | phrog_3851 | unknown function | unknown function | 1 | 32004 | 32393 |
| ASR87742.1 | MF140435_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28853 | 29188 |
| ASR87762.1 | MF140435_p54 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38198 | 38437 |
| ASR87746.1 | MF140435_p38 | HTH DNA binding protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31055 | 31381 |
| ASR87779.1 | MF140435_p71 | hypothetical protein | phrog_12554 | unknown function | unknown function | 1 | 44712 | 44882 |
| ASR87781.1 | MF140435_p73 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45344 | 47965 |