Genomic map of Mycobacterium phage MyraDee (MF141539)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF141539
Definition
Mycobacterium phage MyraDee, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
50514
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
62.69
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR77134.1 MF141539_p26 minor tail protein phrog_352 minor tail protein tail 1 19887 20348
ASR77130.1 MF141539_p21 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 13288 14093
ASR77147.1 MF141539_p39 hypothetical protein phrog_2516 unknown function unknown function -1 26826 27023
ASR77152.1 MF141539_p44 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 29960 32002
ASR77135.1 MF141539_p27 hypothetical protein singleton unknown function unknown function 1 20348 20419
ASR77145.1 MF141539_p37 hypothetical protein phrog_383 unknown function unknown function -1 26290 26643
ASR77110.1 MF141539_p2 terminase small subunit phrog_226 minor tail protein tail 1 664 1128
ASR77202.1 MF141539_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 35332 35736
ASR77189.1 MF141539_p82 hypothetical protein singleton unknown function unknown function -1 45142 45327
ASR77160.1 MF141539_p52 hypothetical protein phrog_5618 unknown function unknown function -1 34551 34835
ASR77194.1 MF141539_p87 ArdA-like antirestriction protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 46521 47060
ASR77186.1 MF141539_p79 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 44003 44293
ASR77118.1 MF141539_p10 portal protein phrog_104 portal protein head and packaging 1 6714 8150
ASR77192.1 MF141539_p85 hypothetical protein singleton unknown function unknown function -1 45667 45891
ASR77196.1 MF141539_p89 hypothetical protein phrog_5371 unknown function unknown function -1 48041 48286
ASR77150.1 MF141539_p42 helix-turn-helix DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29043 29297
ASR77151.1 MF141539_p43 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 29361 29930
ASR77115.1 MF141539_p7 lysin A phrog_317 endolysin lysis 1 3258 4625
ASR77139.1 MF141539_p31 excise phrog_733 excisionase integration and excision 1 24244 24663
ASR77161.1 MF141539_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 34857 35516
ASR77181.1 MF141539_p74 hypothetical protein phrog_1178 unknown function unknown function -1 42735 43043
ASR77201.1 MF141539_p94 hypothetical protein singleton unknown function unknown function -1 49035 49379
ASR77173.1 MF141539_p66 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 38666 39043
ASR77179.1 MF141539_p72 hypothetical protein phrog_4421 unknown function unknown function -1 41564 41845
ASR77129.1 MF141539_p22 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 13288 13680
ASR77185.1 MF141539_p78 hypothetical protein singleton unknown function unknown function -1 43803 43991
ASR77114.1 MF141539_p6 hypothetical protein phrog_1087 unknown function unknown function 1 3130 3258
ASR77164.1 MF141539_p57 hypothetical protein singleton unknown function unknown function -1 36038 36199
ASR77169.1 MF141539_p62 helix-turn-helix DNA binding domain protein phrog_1123 unknown function unknown function -1 37120 37380
ASR77159.1 MF141539_p51 hypothetical protein phrog_2387 nucleotide kinase other -1 34052 34558
ASR77188.1 MF141539_p81 hypothetical protein phrog_2355 unknown function unknown function -1 44695 45138
ASR77148.1 MF141539_p40 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27056 28864
ASR77155.1 MF141539_p47 hypothetical protein singleton unknown function unknown function -1 32384 32494
ASR77172.1 MF141539_p65 phosphoribosyl transferase phrog_2068 phosphoribosyl transferase other -1 37957 38619
ASR77180.1 MF141539_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 41872 42375
ASR77193.1 MF141539_p86 hypothetical protein phrog_6186 unknown function unknown function -1 45904 46509
ASR77157.1 MF141539_p49 phosphoesterase phrog_221 metallo-phosphoesterase other -1 33097 33864
ASR77112.1 MF141539_p4 hypothetical protein phrog_819 tail protein tail 1 1517 2386
ASR77127.1 MF141539_p19 head-to-tail connector protein phrog_123 tail terminator connector 1 12134 12556
ASR77111.1 MF141539_p3 hypothetical protein phrog_1126 unknown function unknown function 1 1206 1520
ASR77163.1 MF141539_p56 hypothetical protein phrog_4886 unknown function unknown function -1 35877 36038
ASR77165.1 MF141539_p58 endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism -1 36225 36584
ASR77143.1 MF141539_p35 hypothetical protein singleton unknown function unknown function -1 25884 26060
ASR77119.1 MF141539_p11 capsid maturation protease phrog_193 head maturation protease head and packaging 1 8147 9010
ASR77156.1 MF141539_p48 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 32479 33093
ASR77128.1 MF141539_p20 major tail protein phrog_117 major tail protein tail 1 12568 13170
ASR77120.1 MF141539_p12 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 9070 9564
ASR77175.1 MF141539_p68 hypothetical protein phrog_2903 unknown function unknown function -1 39935 40150
ASR77174.1 MF141539_p67 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 39123 39869
ASR77178.1 MF141539_p71 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 40682 41512
ASR77146.1 MF141539_p38 hypothetical protein singleton unknown function unknown function -1 26630 26836
ASR77168.1 MF141539_p61 hypothetical protein singleton unknown function unknown function -1 36956 37123
ASR77133.1 MF141539_p25 minor tail protein phrog_110 minor tail protein tail 1 18055 19854
ASR77197.1 MF141539_p90 hypothetical protein singleton unknown function unknown function -1 48290 48412
ASR77167.1 MF141539_p60 hypothetical protein phrog_1498 unknown function unknown function -1 36816 36959
ASR77190.1 MF141539_p83 hypothetical protein phrog_2124 unknown function unknown function -1 45327 45467
ASR77117.1 MF141539_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 5029 6714
ASR77137.1 MF141539_p29 minor tail protein phrog_737 minor tail protein tail 1 20768 22630
ASR77144.1 MF141539_p36 hypothetical protein phrog_980 unknown function unknown function -1 26057 26293
ASR77199.1 MF141539_p92 hypothetical protein phrog_2499 unknown function unknown function -1 48646 48828
ASR77158.1 MF141539_p50 hypothetical protein phrog_17770 unknown function unknown function -1 33861 34055
ASR77140.1 MF141539_p32 hypothetical protein phrog_1712 unknown function unknown function -1 24768 25082
ASR77154.1 MF141539_p46 hypothetical protein phrog_499 unknown function unknown function -1 32187 32384
ASR77184.1 MF141539_p77 hypothetical protein singleton unknown function unknown function -1 43529 43801
ASR77113.1 MF141539_p5 hypothetical protein phrog_356 minor tail protein tail 1 2390 3028
ASR77162.1 MF141539_p55 hypothetical protein phrog_20021 unknown function unknown function -1 35729 35884
ASR77166.1 MF141539_p59 hypothetical protein singleton unknown function unknown function -1 36664 36819
ASR77142.1 MF141539_p34 hypothetical protein phrog_6549 unknown function unknown function -1 25703 25891
ASR77136.1 MF141539_p28 minor tail protein phrog_404 minor tail protein tail 1 20416 20760
ASR77176.1 MF141539_p69 helix-turn-helix DNA binding domain protein phrog_520 unknown function unknown function -1 40147 40422
ASR77131.1 MF141539_p23 tape measure protein phrog_305 tail length tape measure protein tail 1 14094 16709
ASR77138.1 MF141539_p30 integrase phrog_95 integrase integration and excision -1 22685 24175
ASR77149.1 MF141539_p41 hypothetical protein singleton unknown function unknown function -1 28873 29043
ASR77183.1 MF141539_p76 hypothetical protein phrog_5098 unknown function unknown function -1 43249 43440
ASR77132.1 MF141539_p24 minor tail protein phrog_106 minor tail protein tail 1 16712 18055
ASR77141.1 MF141539_p33 deoxyxytidylate deaminase phrog_2369 dCMP deaminase DNA, RNA and nucleotide metabolism -1 25126 25725
ASR77124.1 MF141539_p16 head-to-tail connector protein singleton unknown function unknown function 1 11265 11429
ASR77153.1 MF141539_p45 hypothetical protein phrog_1454 unknown function unknown function -1 31999 32187
ASR77200.1 MF141539_p93 hypothetical protein singleton unknown function unknown function -1 48830 49024
ASR77122.1 MF141539_p14 head-to-tail connector protein singleton unknown function unknown function 1 10624 10881
ASR77170.1 MF141539_p63 hypothetical protein phrog_289 GTP-binding domain other -1 37377 37799
ASR77187.1 MF141539_p80 hypothetical protein phrog_1173 unknown function unknown function -1 44290 44574
ASR77121.1 MF141539_p13 major capsid protein phrog_10 major head protein head and packaging 1 9598 10551
ASR77182.1 MF141539_p75 hypothetical protein phrog_1875 unknown function unknown function -1 43040 43252
ASR77116.1 MF141539_p8 holin phrog_526 holin lysis 1 4622 5008
ASR77123.1 MF141539_p15 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 10885 11268
ASR77171.1 MF141539_p64 hypothetical protein phrog_397 unknown function unknown function -1 37787 37954
ASR77195.1 MF141539_p88 hypothetical protein phrog_3906 unknown function unknown function -1 47162 47959
ASR77125.1 MF141539_p17 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 11426 11803
ASR77198.1 MF141539_p91 hypothetical protein phrog_3471 unknown function unknown function -1 48416 48649
ASR77177.1 MF141539_p70 hypothetical protein phrog_642 unknown function unknown function -1 40406 40654
ASR77126.1 MF141539_p18 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 11803 12120
ASR77191.1 MF141539_p84 hypothetical protein singleton unknown function unknown function -1 45479 45670
ASR77109.1 MF141539_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 377 667