| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF141539 |
Definition |
Mycobacterium phage MyraDee, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
50514 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
62.69 |
Number of singletons |
18 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR77134.1 | MF141539_p26 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 19887 | 20348 |
| ASR77130.1 | MF141539_p21 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 13288 | 14093 |
| ASR77147.1 | MF141539_p39 | hypothetical protein | phrog_2516 | unknown function | unknown function | -1 | 26826 | 27023 |
| ASR77152.1 | MF141539_p44 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 29960 | 32002 |
| ASR77135.1 | MF141539_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20348 | 20419 |
| ASR77145.1 | MF141539_p37 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 26290 | 26643 |
| ASR77110.1 | MF141539_p2 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 664 | 1128 |
| ASR77202.1 | MF141539_p54 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 35332 | 35736 |
| ASR77189.1 | MF141539_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45142 | 45327 |
| ASR77160.1 | MF141539_p52 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 34551 | 34835 |
| ASR77194.1 | MF141539_p87 | ArdA-like antirestriction protein | phrog_2059 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 46521 | 47060 |
| ASR77186.1 | MF141539_p79 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 44003 | 44293 |
| ASR77118.1 | MF141539_p10 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 6714 | 8150 |
| ASR77192.1 | MF141539_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45667 | 45891 |
| ASR77196.1 | MF141539_p89 | hypothetical protein | phrog_5371 | unknown function | unknown function | -1 | 48041 | 48286 |
| ASR77150.1 | MF141539_p42 | helix-turn-helix DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29043 | 29297 |
| ASR77151.1 | MF141539_p43 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 29361 | 29930 |
| ASR77115.1 | MF141539_p7 | lysin A | phrog_317 | endolysin | lysis | 1 | 3258 | 4625 |
| ASR77139.1 | MF141539_p31 | excise | phrog_733 | excisionase | integration and excision | 1 | 24244 | 24663 |
| ASR77161.1 | MF141539_p53 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 34857 | 35516 |
| ASR77181.1 | MF141539_p74 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 42735 | 43043 |
| ASR77201.1 | MF141539_p94 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49035 | 49379 |
| ASR77173.1 | MF141539_p66 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 38666 | 39043 |
| ASR77179.1 | MF141539_p72 | hypothetical protein | phrog_4421 | unknown function | unknown function | -1 | 41564 | 41845 |
| ASR77129.1 | MF141539_p22 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 13288 | 13680 |
| ASR77185.1 | MF141539_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43803 | 43991 |
| ASR77114.1 | MF141539_p6 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 3130 | 3258 |
| ASR77164.1 | MF141539_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36038 | 36199 |
| ASR77169.1 | MF141539_p62 | helix-turn-helix DNA binding domain protein | phrog_1123 | unknown function | unknown function | -1 | 37120 | 37380 |
| ASR77159.1 | MF141539_p51 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 34052 | 34558 |
| ASR77188.1 | MF141539_p81 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 44695 | 45138 |
| ASR77148.1 | MF141539_p40 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27056 | 28864 |
| ASR77155.1 | MF141539_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32384 | 32494 |
| ASR77172.1 | MF141539_p65 | phosphoribosyl transferase | phrog_2068 | phosphoribosyl transferase | other | -1 | 37957 | 38619 |
| ASR77180.1 | MF141539_p73 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 41872 | 42375 |
| ASR77193.1 | MF141539_p86 | hypothetical protein | phrog_6186 | unknown function | unknown function | -1 | 45904 | 46509 |
| ASR77157.1 | MF141539_p49 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 33097 | 33864 |
| ASR77112.1 | MF141539_p4 | hypothetical protein | phrog_819 | tail protein | tail | 1 | 1517 | 2386 |
| ASR77127.1 | MF141539_p19 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 12134 | 12556 |
| ASR77111.1 | MF141539_p3 | hypothetical protein | phrog_1126 | unknown function | unknown function | 1 | 1206 | 1520 |
| ASR77163.1 | MF141539_p56 | hypothetical protein | phrog_4886 | unknown function | unknown function | -1 | 35877 | 36038 |
| ASR77165.1 | MF141539_p58 | endonuclease VII | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 36225 | 36584 |
| ASR77143.1 | MF141539_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25884 | 26060 |
| ASR77119.1 | MF141539_p11 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 8147 | 9010 |
| ASR77156.1 | MF141539_p48 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 32479 | 33093 |
| ASR77128.1 | MF141539_p20 | major tail protein | phrog_117 | major tail protein | tail | 1 | 12568 | 13170 |
| ASR77120.1 | MF141539_p12 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 9070 | 9564 |
| ASR77175.1 | MF141539_p68 | hypothetical protein | phrog_2903 | unknown function | unknown function | -1 | 39935 | 40150 |
| ASR77174.1 | MF141539_p67 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 39123 | 39869 |
| ASR77178.1 | MF141539_p71 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 40682 | 41512 |
| ASR77146.1 | MF141539_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26630 | 26836 |
| ASR77168.1 | MF141539_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36956 | 37123 |
| ASR77133.1 | MF141539_p25 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18055 | 19854 |
| ASR77197.1 | MF141539_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48290 | 48412 |
| ASR77167.1 | MF141539_p60 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 36816 | 36959 |
| ASR77190.1 | MF141539_p83 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 45327 | 45467 |
| ASR77117.1 | MF141539_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 5029 | 6714 |
| ASR77137.1 | MF141539_p29 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 20768 | 22630 |
| ASR77144.1 | MF141539_p36 | hypothetical protein | phrog_980 | unknown function | unknown function | -1 | 26057 | 26293 |
| ASR77199.1 | MF141539_p92 | hypothetical protein | phrog_2499 | unknown function | unknown function | -1 | 48646 | 48828 |
| ASR77158.1 | MF141539_p50 | hypothetical protein | phrog_17770 | unknown function | unknown function | -1 | 33861 | 34055 |
| ASR77140.1 | MF141539_p32 | hypothetical protein | phrog_1712 | unknown function | unknown function | -1 | 24768 | 25082 |
| ASR77154.1 | MF141539_p46 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 32187 | 32384 |
| ASR77184.1 | MF141539_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43529 | 43801 |
| ASR77113.1 | MF141539_p5 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 2390 | 3028 |
| ASR77162.1 | MF141539_p55 | hypothetical protein | phrog_20021 | unknown function | unknown function | -1 | 35729 | 35884 |
| ASR77166.1 | MF141539_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36664 | 36819 |
| ASR77142.1 | MF141539_p34 | hypothetical protein | phrog_6549 | unknown function | unknown function | -1 | 25703 | 25891 |
| ASR77136.1 | MF141539_p28 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 20416 | 20760 |
| ASR77176.1 | MF141539_p69 | helix-turn-helix DNA binding domain protein | phrog_520 | unknown function | unknown function | -1 | 40147 | 40422 |
| ASR77131.1 | MF141539_p23 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 14094 | 16709 |
| ASR77138.1 | MF141539_p30 | integrase | phrog_95 | integrase | integration and excision | -1 | 22685 | 24175 |
| ASR77149.1 | MF141539_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28873 | 29043 |
| ASR77183.1 | MF141539_p76 | hypothetical protein | phrog_5098 | unknown function | unknown function | -1 | 43249 | 43440 |
| ASR77132.1 | MF141539_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16712 | 18055 |
| ASR77141.1 | MF141539_p33 | deoxyxytidylate deaminase | phrog_2369 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 25126 | 25725 |
| ASR77124.1 | MF141539_p16 | head-to-tail connector protein | singleton | unknown function | unknown function | 1 | 11265 | 11429 |
| ASR77153.1 | MF141539_p45 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 31999 | 32187 |
| ASR77200.1 | MF141539_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48830 | 49024 |
| ASR77122.1 | MF141539_p14 | head-to-tail connector protein | singleton | unknown function | unknown function | 1 | 10624 | 10881 |
| ASR77170.1 | MF141539_p63 | hypothetical protein | phrog_289 | GTP-binding domain | other | -1 | 37377 | 37799 |
| ASR77187.1 | MF141539_p80 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 44290 | 44574 |
| ASR77121.1 | MF141539_p13 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 9598 | 10551 |
| ASR77182.1 | MF141539_p75 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 43040 | 43252 |
| ASR77116.1 | MF141539_p8 | holin | phrog_526 | holin | lysis | 1 | 4622 | 5008 |
| ASR77123.1 | MF141539_p15 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10885 | 11268 |
| ASR77171.1 | MF141539_p64 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 37787 | 37954 |
| ASR77195.1 | MF141539_p88 | hypothetical protein | phrog_3906 | unknown function | unknown function | -1 | 47162 | 47959 |
| ASR77125.1 | MF141539_p17 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 11426 | 11803 |
| ASR77198.1 | MF141539_p91 | hypothetical protein | phrog_3471 | unknown function | unknown function | -1 | 48416 | 48649 |
| ASR77177.1 | MF141539_p70 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 40406 | 40654 |
| ASR77126.1 | MF141539_p18 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 11803 | 12120 |
| ASR77191.1 | MF141539_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45479 | 45670 |
| ASR77109.1 | MF141539_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 377 | 667 |