Genomic map of Escherichia phage ST2 (MF153391)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF153391
Definition
Escherichia phage ST2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; unclassified Kagunavirus.
DB of origin
NUCCORE
Length
44517
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
50.8
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASH99401.1 MF153391_p71 terminase large subunit phrog_2 terminase large subunit head and packaging -1 42485 43756
ASH99351.1 MF153391_p21 hypothetical protein phrog_15836 unknown function unknown function -1 5717 5860
ASH99338.1 MF153391_p8 hypothetical protein phrog_4684 unknown function unknown function -1 1609 1764
ASH99387.1 MF153391_p57 hypothetical protein phrog_161 head closure Hc1 connector -1 33959 34318
ASH99394.1 MF153391_p64 hypothetical protein phrog_206 head scaffolding protein head and packaging -1 37587 38288
ASH99340.1 MF153391_p10 hypothetical protein phrog_20019 unknown function unknown function -1 2042 2251
ASH99377.1 MF153391_p47 tape measure protein phrog_1538 tail length tape measure protein tail -1 26157 28430
ASH99399.1 MF153391_p69 hypothetical protein phrog_35937 unknown function unknown function 1 40801 40968
ASH99396.1 MF153391_p66 spanin phrog_2536 Rz-like spanin lysis -1 38480 38866
ASH99366.1 MF153391_p36 hypothetical protein phrog_10404 unknown function unknown function 1 16145 16276
ASH99337.1 MF153391_p7 hypothetical protein singleton unknown function unknown function -1 1373 1612
ASH99360.1 MF153391_p30 hypothetical protein phrog_3127 unknown function unknown function 1 10762 11277
ASH99369.1 MF153391_p39 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 17906 19330
ASH99383.1 MF153391_p53 replication factor C large subunit phrog_139 deoxynucleoside monophosphate kinase other 1 31216 31785
ASH99354.1 MF153391_p24 hypothetical protein singleton unknown function unknown function 1 6954 7097
ASH99393.1 MF153391_p63 major capsid protein phrog_247 major head protein head and packaging -1 36535 37584
ASH99372.1 MF153391_p42 hypothetical protein phrog_16586 tail fiber protein tail -1 19675 22221
ASH99395.1 MF153391_p65 spanin phrog_5672 Rz-like spanin lysis -1 38371 38514
ASH99381.1 MF153391_p51 calcineurin-like phosphoesterase superfamily domain protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 29601 30731
ASH99379.1 MF153391_p49 hypothetical protein phrog_313 Tail assembly chaperone tail -1 28788 29204
ASH99370.1 MF153391_p40 hypothetical protein phrog_27617 unknown function unknown function 1 19327 19512
ASH99344.1 MF153391_p14 hypothetical protein phrog_9632 unknown function unknown function -1 3702 3995
ASH99388.1 MF153391_p58 hypothetical protein phrog_3614 unknown function unknown function -1 34318 34932
ASH99361.1 MF153391_p31 hypothetical protein singleton unknown function unknown function 1 11300 11551
ASH99390.1 MF153391_p60 hypothetical protein phrog_4451 unknown function unknown function -1 35594 35773
ASH99346.1 MF153391_p16 hypothetical protein phrog_3766 unknown function unknown function -1 4347 4550
ASH99363.1 MF153391_p33 PD-(D/E)XK nuclease superfamily protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 11866 13140
ASH99385.1 MF153391_p55 hypothetical protein phrog_290 minor tail protein tail -1 31982 33151
ASH99356.1 MF153391_p26 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 7597 9837
ASH99365.1 MF153391_p35 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13915 16155
ASH99389.1 MF153391_p59 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 34935 35444
ASH99349.1 MF153391_p19 hypothetical protein singleton unknown function unknown function -1 5239 5406
ASH99348.1 MF153391_p18 hypothetical protein phrog_35344 unknown function unknown function -1 5010 5138
ASH99368.1 MF153391_p38 hypothetical protein phrog_1008 DNA methyltransferase other 1 17216 17869
ASH99333.1 MF153391_p3 hypothetical protein singleton unknown function unknown function -1 529 789
ASH99359.1 MF153391_p29 hypothetical protein phrog_34383 unknown function unknown function 1 10505 10762
ASH99358.1 MF153391_p28 transcriptional repressor phrog_3 transcriptional repressor transcription regulation -1 10162 10377
ASH99367.1 MF153391_p37 VRR-NUC domain protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 16358 16645
ASH99339.1 MF153391_p9 hypothetical protein singleton unknown function unknown function -1 1761 2045
ASH99331.1 MF153391_p1 hypothetical protein phrog_268 unknown function unknown function -1 136 372
ASH99341.1 MF153391_p11 hypothetical protein phrog_2180 unknown function unknown function -1 2248 2397
ASH99355.1 MF153391_p25 hypothetical protein singleton unknown function unknown function 1 7090 7539
ASH99332.1 MF153391_p2 hypothetical protein phrog_5407 unknown function unknown function -1 369 539
ASH99386.1 MF153391_p56 tail protein phrog_169 tail completion or Neck1 protein connector -1 33567 33962
ASH99374.1 MF153391_p44 hypothetical protein phrog_329 minor tail protein tail -1 24783 25148
ASH99335.1 MF153391_p5 hypothetical protein phrog_9023 unknown function unknown function -1 963 1202
ASH99347.1 MF153391_p17 hypothetical protein phrog_6094 unknown function unknown function -1 4547 5020
ASH99392.1 MF153391_p62 hypothetical protein phrog_4366 head fiber protein head and packaging -1 36176 36475
ASH99375.1 MF153391_p45 hypothetical protein phrog_396 minor tail protein tail -1 25145 25660
ASH99345.1 MF153391_p15 hypothetical protein singleton unknown function unknown function -1 3992 4345
ASH99384.1 MF153391_p54 hypothetical protein singleton unknown function unknown function 1 31778 31954
ASH99357.1 MF153391_p27 hypothetical protein phrog_2638 unknown function unknown function 1 9834 10130
ASH99382.1 MF153391_p52 acid phosphatase phrog_415 polynucleotide kinase other 1 30728 31216
ASH99343.1 MF153391_p13 holin-like class I phrog_2508 holin lysis -1 3053 3325
ASH99334.1 MF153391_p4 hypothetical protein phrog_10509 unknown function unknown function -1 794 976
ASH99391.1 MF153391_p61 hypothetical protein phrog_4069 Hoc-like head decoration head and packaging -1 35810 36163
ASH99398.1 MF153391_p68 hypothetical protein phrog_241 head morphogenesis head and packaging -1 39670 40713
ASH99336.1 MF153391_p6 hypothetical protein phrog_1402 unknown function unknown function -1 1195 1380
ASH99376.1 MF153391_p46 hypothetical protein phrog_384 virion structural protein head and packaging -1 25657 26157
ASH99373.1 MF153391_p43 tail protein phrog_469 tail protein tail -1 22234 24792
ASH99380.1 MF153391_p50 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 29372 29563
ASH99350.1 MF153391_p20 hypothetical protein phrog_924 unknown function unknown function -1 5540 5713
ASH99342.1 MF153391_p12 endolysin phrog_7 endolysin lysis -1 2578 3075
ASH99378.1 MF153391_p48 hypothetical protein phrog_4557 unknown function unknown function -1 28423 28689
ASH99364.1 MF153391_p34 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 13229 13855
ASH99371.1 MF153391_p41 exonuclease subunit SbcD phrog_5915 unknown function unknown function 1 19509 19646
ASH99397.1 MF153391_p67 tail protein phrog_3945 Hoc-like head decoration head and packaging -1 39209 39667
ASH99400.1 MF153391_p70 structural protein phrog_145 portal protein head and packaging -1 41003 42472
ASH99352.1 MF153391_p22 hypothetical protein singleton unknown function unknown function -1 5864 6055
ASH99353.1 MF153391_p23 hypothetical protein singleton unknown function unknown function -1 6055 6288
ASH99402.1 MF153391_p72 terminase small subunit phrog_3064 terminase head and packaging -1 43746 44255
ASH99362.1 MF153391_p32 hypothetical protein phrog_4965 unknown function unknown function 1 11597 11869