| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF153391 |
Definition |
Escherichia phage ST2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; unclassified Kagunavirus. |
DB of origin |
NUCCORE |
Length |
44517 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
72 |
%GC |
50.8 |
Number of singletons |
11 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASH99401.1 | MF153391_p71 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 42485 | 43756 |
| ASH99351.1 | MF153391_p21 | hypothetical protein | phrog_15836 | unknown function | unknown function | -1 | 5717 | 5860 |
| ASH99338.1 | MF153391_p8 | hypothetical protein | phrog_4684 | unknown function | unknown function | -1 | 1609 | 1764 |
| ASH99387.1 | MF153391_p57 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 33959 | 34318 |
| ASH99394.1 | MF153391_p64 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | -1 | 37587 | 38288 |
| ASH99340.1 | MF153391_p10 | hypothetical protein | phrog_20019 | unknown function | unknown function | -1 | 2042 | 2251 |
| ASH99377.1 | MF153391_p47 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | -1 | 26157 | 28430 |
| ASH99399.1 | MF153391_p69 | hypothetical protein | phrog_35937 | unknown function | unknown function | 1 | 40801 | 40968 |
| ASH99396.1 | MF153391_p66 | spanin | phrog_2536 | Rz-like spanin | lysis | -1 | 38480 | 38866 |
| ASH99366.1 | MF153391_p36 | hypothetical protein | phrog_10404 | unknown function | unknown function | 1 | 16145 | 16276 |
| ASH99337.1 | MF153391_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1373 | 1612 |
| ASH99360.1 | MF153391_p30 | hypothetical protein | phrog_3127 | unknown function | unknown function | 1 | 10762 | 11277 |
| ASH99369.1 | MF153391_p39 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 17906 | 19330 |
| ASH99383.1 | MF153391_p53 | replication factor C large subunit | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 31216 | 31785 |
| ASH99354.1 | MF153391_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6954 | 7097 |
| ASH99393.1 | MF153391_p63 | major capsid protein | phrog_247 | major head protein | head and packaging | -1 | 36535 | 37584 |
| ASH99372.1 | MF153391_p42 | hypothetical protein | phrog_16586 | tail fiber protein | tail | -1 | 19675 | 22221 |
| ASH99395.1 | MF153391_p65 | spanin | phrog_5672 | Rz-like spanin | lysis | -1 | 38371 | 38514 |
| ASH99381.1 | MF153391_p51 | calcineurin-like phosphoesterase superfamily domain protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29601 | 30731 |
| ASH99379.1 | MF153391_p49 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | -1 | 28788 | 29204 |
| ASH99370.1 | MF153391_p40 | hypothetical protein | phrog_27617 | unknown function | unknown function | 1 | 19327 | 19512 |
| ASH99344.1 | MF153391_p14 | hypothetical protein | phrog_9632 | unknown function | unknown function | -1 | 3702 | 3995 |
| ASH99388.1 | MF153391_p58 | hypothetical protein | phrog_3614 | unknown function | unknown function | -1 | 34318 | 34932 |
| ASH99361.1 | MF153391_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11300 | 11551 |
| ASH99390.1 | MF153391_p60 | hypothetical protein | phrog_4451 | unknown function | unknown function | -1 | 35594 | 35773 |
| ASH99346.1 | MF153391_p16 | hypothetical protein | phrog_3766 | unknown function | unknown function | -1 | 4347 | 4550 |
| ASH99363.1 | MF153391_p33 | PD-(D/E)XK nuclease superfamily protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 11866 | 13140 |
| ASH99385.1 | MF153391_p55 | hypothetical protein | phrog_290 | minor tail protein | tail | -1 | 31982 | 33151 |
| ASH99356.1 | MF153391_p26 | helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | 1 | 7597 | 9837 |
| ASH99365.1 | MF153391_p35 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13915 | 16155 |
| ASH99389.1 | MF153391_p59 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | -1 | 34935 | 35444 |
| ASH99349.1 | MF153391_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5239 | 5406 |
| ASH99348.1 | MF153391_p18 | hypothetical protein | phrog_35344 | unknown function | unknown function | -1 | 5010 | 5138 |
| ASH99368.1 | MF153391_p38 | hypothetical protein | phrog_1008 | DNA methyltransferase | other | 1 | 17216 | 17869 |
| ASH99333.1 | MF153391_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 529 | 789 |
| ASH99359.1 | MF153391_p29 | hypothetical protein | phrog_34383 | unknown function | unknown function | 1 | 10505 | 10762 |
| ASH99358.1 | MF153391_p28 | transcriptional repressor | phrog_3 | transcriptional repressor | transcription regulation | -1 | 10162 | 10377 |
| ASH99367.1 | MF153391_p37 | VRR-NUC domain protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16358 | 16645 |
| ASH99339.1 | MF153391_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1761 | 2045 |
| ASH99331.1 | MF153391_p1 | hypothetical protein | phrog_268 | unknown function | unknown function | -1 | 136 | 372 |
| ASH99341.1 | MF153391_p11 | hypothetical protein | phrog_2180 | unknown function | unknown function | -1 | 2248 | 2397 |
| ASH99355.1 | MF153391_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7090 | 7539 |
| ASH99332.1 | MF153391_p2 | hypothetical protein | phrog_5407 | unknown function | unknown function | -1 | 369 | 539 |
| ASH99386.1 | MF153391_p56 | tail protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 33567 | 33962 |
| ASH99374.1 | MF153391_p44 | hypothetical protein | phrog_329 | minor tail protein | tail | -1 | 24783 | 25148 |
| ASH99335.1 | MF153391_p5 | hypothetical protein | phrog_9023 | unknown function | unknown function | -1 | 963 | 1202 |
| ASH99347.1 | MF153391_p17 | hypothetical protein | phrog_6094 | unknown function | unknown function | -1 | 4547 | 5020 |
| ASH99392.1 | MF153391_p62 | hypothetical protein | phrog_4366 | head fiber protein | head and packaging | -1 | 36176 | 36475 |
| ASH99375.1 | MF153391_p45 | hypothetical protein | phrog_396 | minor tail protein | tail | -1 | 25145 | 25660 |
| ASH99345.1 | MF153391_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3992 | 4345 |
| ASH99384.1 | MF153391_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31778 | 31954 |
| ASH99357.1 | MF153391_p27 | hypothetical protein | phrog_2638 | unknown function | unknown function | 1 | 9834 | 10130 |
| ASH99382.1 | MF153391_p52 | acid phosphatase | phrog_415 | polynucleotide kinase | other | 1 | 30728 | 31216 |
| ASH99343.1 | MF153391_p13 | holin-like class I | phrog_2508 | holin | lysis | -1 | 3053 | 3325 |
| ASH99334.1 | MF153391_p4 | hypothetical protein | phrog_10509 | unknown function | unknown function | -1 | 794 | 976 |
| ASH99391.1 | MF153391_p61 | hypothetical protein | phrog_4069 | Hoc-like head decoration | head and packaging | -1 | 35810 | 36163 |
| ASH99398.1 | MF153391_p68 | hypothetical protein | phrog_241 | head morphogenesis | head and packaging | -1 | 39670 | 40713 |
| ASH99336.1 | MF153391_p6 | hypothetical protein | phrog_1402 | unknown function | unknown function | -1 | 1195 | 1380 |
| ASH99376.1 | MF153391_p46 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | -1 | 25657 | 26157 |
| ASH99373.1 | MF153391_p43 | tail protein | phrog_469 | tail protein | tail | -1 | 22234 | 24792 |
| ASH99380.1 | MF153391_p50 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 29372 | 29563 |
| ASH99350.1 | MF153391_p20 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 5540 | 5713 |
| ASH99342.1 | MF153391_p12 | endolysin | phrog_7 | endolysin | lysis | -1 | 2578 | 3075 |
| ASH99378.1 | MF153391_p48 | hypothetical protein | phrog_4557 | unknown function | unknown function | -1 | 28423 | 28689 |
| ASH99364.1 | MF153391_p34 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 13229 | 13855 |
| ASH99371.1 | MF153391_p41 | exonuclease subunit SbcD | phrog_5915 | unknown function | unknown function | 1 | 19509 | 19646 |
| ASH99397.1 | MF153391_p67 | tail protein | phrog_3945 | Hoc-like head decoration | head and packaging | -1 | 39209 | 39667 |
| ASH99400.1 | MF153391_p70 | structural protein | phrog_145 | portal protein | head and packaging | -1 | 41003 | 42472 |
| ASH99352.1 | MF153391_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5864 | 6055 |
| ASH99353.1 | MF153391_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6055 | 6288 |
| ASH99402.1 | MF153391_p72 | terminase small subunit | phrog_3064 | terminase | head and packaging | -1 | 43746 | 44255 |
| ASH99362.1 | MF153391_p32 | hypothetical protein | phrog_4965 | unknown function | unknown function | 1 | 11597 | 11869 |