| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF158036 |
Definition |
Salmonella phage St161, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
29178 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
50.49 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE85576.1 | MF158036_p38 | hypothetical protein | phrog_4684 | unknown function | unknown function | -1 | 26517 | 26690 |
| ATE85556.1 | MF158036_p18 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | -1 | 14265 | 14774 |
| ATE85582.1 | MF158036_p44 | hypothetical protein | phrog_2359 | holin | lysis | -1 | 27827 | 28108 |
| ATE85553.1 | MF158036_p15 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 12894 | 13292 |
| ATE85567.1 | MF158036_p29 | head morphogenesis protein | phrog_241 | head morphogenesis | head and packaging | -1 | 20672 | 21715 |
| ATE85539.1 | MF158036_p1 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 133 | 1095 |
| ATE85550.1 | MF158036_p12 | hypothetical protein | phrog_34162 | unknown function | unknown function | 1 | 11005 | 11289 |
| ATE85545.1 | MF158036_p7 | hypothetical protein | phrog_396 | minor tail protein | tail | -1 | 6824 | 7339 |
| ATE85548.1 | MF158036_p10 | hypothetical protein | phrog_4557 | unknown function | unknown function | -1 | 10060 | 10254 |
| ATE85570.1 | MF158036_p32 | terminase small subunit | phrog_3064 | terminase | head and packaging | -1 | 24841 | 25392 |
| ATE85551.1 | MF158036_p13 | tail protein | phrog_290 | minor tail protein | tail | -1 | 11312 | 12478 |
| ATE85571.1 | MF158036_p33 | hypothetical protein | phrog_10956 | unknown function | unknown function | -1 | 25480 | 25644 |
| ATE85575.1 | MF158036_p37 | hypothetical protein | phrog_1402 | unknown function | unknown function | -1 | 26339 | 26524 |
| ATE85572.1 | MF158036_p34 | hypothetical protein | phrog_268 | unknown function | unknown function | -1 | 25644 | 25862 |
| ATE85569.1 | MF158036_p31 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 23595 | 24866 |
| ATE85583.1 | MF158036_p45 | hypothetical protein | phrog_4947 | unknown function | unknown function | -1 | 28181 | 28582 |
| ATE85555.1 | MF158036_p17 | hypothetical protein | phrog_3614 | unknown function | unknown function | -1 | 13648 | 14262 |
| ATE85562.1 | MF158036_p24 | hypothetical protein | phrog_1267 | Rz-like spanin | lysis | -1 | 17562 | 17801 |
| ATE85554.1 | MF158036_p16 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 13289 | 13648 |
| ATE85577.1 | MF158036_p39 | hypothetical protein | phrog_3002 | unknown function | unknown function | -1 | 26690 | 26875 |
| ATE85568.1 | MF158036_p30 | structural protein | phrog_145 | portal protein | head and packaging | -1 | 22085 | 23578 |
| ATE85563.1 | MF158036_p25 | spanin | phrog_2536 | Rz-like spanin | lysis | -1 | 17794 | 18237 |
| ATE85540.1 | MF158036_p2 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1092 | 1598 |
| ATE85560.1 | MF158036_p22 | coat protein | phrog_247 | major head protein | head and packaging | -1 | 15725 | 16774 |
| ATE85578.1 | MF158036_p40 | hypothetical protein | phrog_2180 | unknown function | unknown function | -1 | 26879 | 27019 |
| ATE85581.1 | MF158036_p43 | holin | phrog_2508 | holin | lysis | -1 | 27526 | 27825 |
| ATE85579.1 | MF158036_p41 | hypothetical protein | phrog_33443 | unknown function | unknown function | -1 | 27016 | 27222 |
| ATE85541.1 | MF158036_p3 | hypothetical protein | phrog_13851 | unknown function | unknown function | 1 | 1608 | 1841 |
| ATE85574.1 | MF158036_p36 | hypothetical protein | phrog_9023 | unknown function | unknown function | -1 | 26106 | 26336 |
| ATE85557.1 | MF158036_p19 | hypothetical protein | phrog_4451 | unknown function | unknown function | -1 | 14778 | 14972 |
| ATE85566.1 | MF158036_p28 | hypothetical protein | phrog_3945 | Hoc-like head decoration | head and packaging | -1 | 20197 | 20670 |
| ATE85559.1 | MF158036_p21 | hypothetical protein | phrog_1954 | virion structural protein | head and packaging | -1 | 15373 | 15663 |
| ATE85580.1 | MF158036_p42 | lysozyme | singleton | unknown function | unknown function | -1 | 27276 | 27545 |
| ATE85585.1 | MF158036_p47 | hypothetical protein | phrog_37174 | unknown function | unknown function | -1 | 28962 | 29171 |
| ATE85584.1 | MF158036_p46 | hypothetical protein | phrog_2452 | unknown function | unknown function | -1 | 28579 | 28929 |
| ATE85552.1 | MF158036_p14 | hypothetical protein | phrog_179 | tail terminator | connector | -1 | 12481 | 12894 |
| ATE85549.1 | MF158036_p11 | tail assembly chaperone | phrog_313 | Tail assembly chaperone | tail | -1 | 10422 | 10841 |
| ATE85546.1 | MF158036_p8 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | -1 | 7336 | 7836 |
| ATE85542.1 | MF158036_p4 | tail fiber protein | phrog_1819 | tail spike protein | tail | -1 | 1969 | 3996 |
| ATE85573.1 | MF158036_p35 | hypothetical protein | phrog_22503 | unknown function | unknown function | -1 | 25859 | 26008 |
| ATE85561.1 | MF158036_p23 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | -1 | 16777 | 17451 |
| ATE85543.1 | MF158036_p5 | tail fiber protein | phrog_469 | tail protein | tail | -1 | 4009 | 6399 |
| ATE85547.1 | MF158036_p9 | tail length tape measure protein | phrog_1538 | tail length tape measure protein | tail | -1 | 7839 | 10067 |
| ATE85558.1 | MF158036_p20 | tail protein | phrog_4069 | Hoc-like head decoration | head and packaging | -1 | 15006 | 15356 |
| ATE85564.1 | MF158036_p26 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 18646 | 19779 |
| ATE85565.1 | MF158036_p27 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 19845 | 20168 |
| ATE85544.1 | MF158036_p6 | hypothetical protein | phrog_329 | minor tail protein | tail | -1 | 6462 | 6827 |