Genomic map of Salmonella phage St161 (MF158036)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF158036
Definition
Salmonella phage St161, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
29178
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
50.49
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE85576.1 MF158036_p38 hypothetical protein phrog_4684 unknown function unknown function -1 26517 26690
ATE85556.1 MF158036_p18 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 14265 14774
ATE85582.1 MF158036_p44 hypothetical protein phrog_2359 holin lysis -1 27827 28108
ATE85553.1 MF158036_p15 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 12894 13292
ATE85567.1 MF158036_p29 head morphogenesis protein phrog_241 head morphogenesis head and packaging -1 20672 21715
ATE85539.1 MF158036_p1 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 133 1095
ATE85550.1 MF158036_p12 hypothetical protein phrog_34162 unknown function unknown function 1 11005 11289
ATE85545.1 MF158036_p7 hypothetical protein phrog_396 minor tail protein tail -1 6824 7339
ATE85548.1 MF158036_p10 hypothetical protein phrog_4557 unknown function unknown function -1 10060 10254
ATE85570.1 MF158036_p32 terminase small subunit phrog_3064 terminase head and packaging -1 24841 25392
ATE85551.1 MF158036_p13 tail protein phrog_290 minor tail protein tail -1 11312 12478
ATE85571.1 MF158036_p33 hypothetical protein phrog_10956 unknown function unknown function -1 25480 25644
ATE85575.1 MF158036_p37 hypothetical protein phrog_1402 unknown function unknown function -1 26339 26524
ATE85572.1 MF158036_p34 hypothetical protein phrog_268 unknown function unknown function -1 25644 25862
ATE85569.1 MF158036_p31 terminase large subunit phrog_2 terminase large subunit head and packaging -1 23595 24866
ATE85583.1 MF158036_p45 hypothetical protein phrog_4947 unknown function unknown function -1 28181 28582
ATE85555.1 MF158036_p17 hypothetical protein phrog_3614 unknown function unknown function -1 13648 14262
ATE85562.1 MF158036_p24 hypothetical protein phrog_1267 Rz-like spanin lysis -1 17562 17801
ATE85554.1 MF158036_p16 hypothetical protein phrog_161 head closure Hc1 connector -1 13289 13648
ATE85577.1 MF158036_p39 hypothetical protein phrog_3002 unknown function unknown function -1 26690 26875
ATE85568.1 MF158036_p30 structural protein phrog_145 portal protein head and packaging -1 22085 23578
ATE85563.1 MF158036_p25 spanin phrog_2536 Rz-like spanin lysis -1 17794 18237
ATE85540.1 MF158036_p2 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1092 1598
ATE85560.1 MF158036_p22 coat protein phrog_247 major head protein head and packaging -1 15725 16774
ATE85578.1 MF158036_p40 hypothetical protein phrog_2180 unknown function unknown function -1 26879 27019
ATE85581.1 MF158036_p43 holin phrog_2508 holin lysis -1 27526 27825
ATE85579.1 MF158036_p41 hypothetical protein phrog_33443 unknown function unknown function -1 27016 27222
ATE85541.1 MF158036_p3 hypothetical protein phrog_13851 unknown function unknown function 1 1608 1841
ATE85574.1 MF158036_p36 hypothetical protein phrog_9023 unknown function unknown function -1 26106 26336
ATE85557.1 MF158036_p19 hypothetical protein phrog_4451 unknown function unknown function -1 14778 14972
ATE85566.1 MF158036_p28 hypothetical protein phrog_3945 Hoc-like head decoration head and packaging -1 20197 20670
ATE85559.1 MF158036_p21 hypothetical protein phrog_1954 virion structural protein head and packaging -1 15373 15663
ATE85580.1 MF158036_p42 lysozyme singleton unknown function unknown function -1 27276 27545
ATE85585.1 MF158036_p47 hypothetical protein phrog_37174 unknown function unknown function -1 28962 29171
ATE85584.1 MF158036_p46 hypothetical protein phrog_2452 unknown function unknown function -1 28579 28929
ATE85552.1 MF158036_p14 hypothetical protein phrog_179 tail terminator connector -1 12481 12894
ATE85549.1 MF158036_p11 tail assembly chaperone phrog_313 Tail assembly chaperone tail -1 10422 10841
ATE85546.1 MF158036_p8 hypothetical protein phrog_384 virion structural protein head and packaging -1 7336 7836
ATE85542.1 MF158036_p4 tail fiber protein phrog_1819 tail spike protein tail -1 1969 3996
ATE85573.1 MF158036_p35 hypothetical protein phrog_22503 unknown function unknown function -1 25859 26008
ATE85561.1 MF158036_p23 hypothetical protein phrog_206 head scaffolding protein head and packaging -1 16777 17451
ATE85543.1 MF158036_p5 tail fiber protein phrog_469 tail protein tail -1 4009 6399
ATE85547.1 MF158036_p9 tail length tape measure protein phrog_1538 tail length tape measure protein tail -1 7839 10067
ATE85558.1 MF158036_p20 tail protein phrog_4069 Hoc-like head decoration head and packaging -1 15006 15356
ATE85564.1 MF158036_p26 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 18646 19779
ATE85565.1 MF158036_p27 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 19845 20168
ATE85544.1 MF158036_p6 hypothetical protein phrog_329 minor tail protein tail -1 6462 6827