| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF158041 |
Definition |
Shigella phage Sf15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Mooglevirus; unclassified Mooglevirus. |
DB of origin |
NUCCORE |
Length |
88474 |
Host Name |
Shigella flexneri |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
134 |
%GC |
38.99 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE86014.1 | MF158041_p81 | hypothetical protein | phrog_11 | baseplate spike | tail | -1 | 50723 | 51364 |
| ATE85935.1 | MF158041_p2 | hypothetical protein | phrog_3436 | unknown function | unknown function | -1 | 579 | 851 |
| ATE86005.1 | MF158041_p72 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 42486 | 43385 |
| ATE86059.1 | MF158041_p126 | hypothetical protein | phrog_7022 | unknown function | unknown function | -1 | 84767 | 85030 |
| ATE86017.1 | MF158041_p84 | hypothetical protein | phrog_3721 | unknown function | unknown function | -1 | 52679 | 53485 |
| ATE85957.1 | MF158041_p24 | hypothetical protein | phrog_4262 | unknown function | unknown function | -1 | 11895 | 12230 |
| ATE85959.1 | MF158041_p26 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 14146 | 15027 |
| ATE86004.1 | MF158041_p71 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 41939 | 42484 |
| ATE86056.1 | MF158041_p123 | hypothetical protein | phrog_4713 | unknown function | unknown function | 1 | 81713 | 82177 |
| ATE86018.1 | MF158041_p85 | tail tape measure protein | phrog_4036 | tail length tape measure protein | tail | -1 | 53485 | 55722 |
| ATE86009.1 | MF158041_p76 | tail fiber protein | phrog_2097 | tail fiber protein | tail | -1 | 46501 | 47676 |
| ATE86045.1 | MF158041_p112 | hypothetical protein | phrog_4348 | unknown function | unknown function | 1 | 77524 | 77904 |
| ATE85945.1 | MF158041_p12 | hypothetical protein | phrog_2210 | unknown function | unknown function | -1 | 4730 | 4930 |
| ATE85983.1 | MF158041_p50 | hypothetical protein | phrog_4469 | unknown function | unknown function | -1 | 30890 | 31090 |
| ATE85973.1 | MF158041_p40 | hypothetical protein | phrog_3358 | unknown function | unknown function | -1 | 24373 | 24708 |
| ATE86064.1 | MF158041_p131 | hypothetical protein | phrog_10118 | unknown function | unknown function | -1 | 86738 | 87037 |
| ATE85960.1 | MF158041_p27 | hypothetical protein | phrog_4726 | unknown function | unknown function | -1 | 15038 | 15316 |
| ATE86031.1 | MF158041_p98 | hypothetical protein | phrog_3977 | unknown function | unknown function | -1 | 63391 | 63891 |
| ATE85952.1 | MF158041_p19 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | -1 | 6775 | 7470 |
| ATE86030.1 | MF158041_p97 | hypothetical protein | phrog_240 | head protein | head and packaging | -1 | 63059 | 63391 |
| ATE86053.1 | MF158041_p120 | hypothetical protein | phrog_4457 | unknown function | unknown function | 1 | 80731 | 80940 |
| ATE85995.1 | MF158041_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37602 | 38090 |
| ATE86049.1 | MF158041_p116 | hypothetical protein | phrog_5380 | unknown function | unknown function | 1 | 79202 | 79942 |
| ATE85967.1 | MF158041_p34 | anaerobic NTP reductase, large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 18057 | 20201 |
| ATE86021.1 | MF158041_p88 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | -1 | 56436 | 56882 |
| ATE86062.1 | MF158041_p129 | hypothetical protein | phrog_4318 | unknown function | unknown function | -1 | 86022 | 86363 |
| ATE86051.1 | MF158041_p118 | hypothetical protein | phrog_4343 | unknown function | unknown function | 1 | 80154 | 80660 |
| ATE85956.1 | MF158041_p23 | hypothetical protein | phrog_3931 | unknown function | unknown function | -1 | 11734 | 11913 |
| ATE86022.1 | MF158041_p89 | hypothetical protein | phrog_205 | tail sheath | tail | -1 | 56897 | 58249 |
| ATE86042.1 | MF158041_p109 | tail fiber protein | phrog_3995 | tail protein | tail | 1 | 75731 | 76615 |
| ATE85970.1 | MF158041_p37 | ribonucleotide triphosphate reductase, small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 20686 | 21759 |
| ATE86033.1 | MF158041_p100 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | -1 | 65370 | 66971 |
| ATE85980.1 | MF158041_p47 | hypothetical protein | phrog_4424 | unknown function | unknown function | -1 | 28519 | 28656 |
| ATE86002.1 | MF158041_p69 | hypothetical protein | phrog_4422 | unknown function | unknown function | 1 | 41158 | 41673 |
| ATE86065.1 | MF158041_p132 | hypothetical protein | phrog_4640 | unknown function | unknown function | -1 | 87038 | 87268 |
| ATE86034.1 | MF158041_p101 | hypothetical protein | phrog_4397 | unknown function | unknown function | -1 | 66993 | 67199 |
| ATE86054.1 | MF158041_p121 | hypothetical protein | phrog_7193 | unknown function | unknown function | 1 | 80984 | 81427 |
| ATE85990.1 | MF158041_p57 | hypothetical protein | phrog_3474 | unknown function | unknown function | 1 | 36534 | 36725 |
| ATE85985.1 | MF158041_p52 | hypothetical protein | phrog_4251 | minor tail protein | tail | -1 | 31892 | 32686 |
| ATE86058.1 | MF158041_p125 | hypothetical protein | phrog_4559 | unknown function | unknown function | -1 | 84450 | 84701 |
| ATE85969.1 | MF158041_p36 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 20444 | 20686 |
| ATE86067.1 | MF158041_p134 | hypothetical protein | phrog_9030 | unknown function | unknown function | -1 | 87974 | 88222 |
| ATE85992.1 | MF158041_p59 | hypothetical protein | phrog_9065 | unknown function | unknown function | 1 | 36845 | 37096 |
| ATE86016.1 | MF158041_p83 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | -1 | 52338 | 52679 |
| ATE86008.1 | MF158041_p75 | tail fiber protein | phrog_4277 | tail fiber protein | tail | -1 | 44077 | 46455 |
| ATE85974.1 | MF158041_p41 | hypothetical protein | phrog_4007 | unknown function | unknown function | -1 | 24701 | 25027 |
| ATE85997.1 | MF158041_p64 | hypothetical protein | phrog_4332 | unknown function | unknown function | 1 | 39429 | 39809 |
| ATE86000.1 | MF158041_p67 | hypothetical protein | phrog_4116 | unknown function | unknown function | 1 | 40309 | 40668 |
| ATE86050.1 | MF158041_p117 | hypothetical protein | phrog_4459 | unknown function | unknown function | 1 | 79939 | 80157 |
| ATE85971.1 | MF158041_p38 | hypothetical protein | phrog_2652 | unknown function | unknown function | -1 | 21756 | 22031 |
| ATE86027.1 | MF158041_p94 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 60176 | 61279 |
| ATE85954.1 | MF158041_p21 | rIIB protein | phrog_609 | RIIB lysis inhibitor | lysis | -1 | 8098 | 9219 |
| ATE86035.1 | MF158041_p102 | hypothetical protein | phrog_2114 | unknown function | unknown function | -1 | 67595 | 68329 |
| ATE86012.1 | MF158041_p79 | baseplate assembly protein | phrog_6 | baseplate wedge subunit | tail | -1 | 48838 | 50307 |
| ATE85953.1 | MF158041_p20 | hypothetical protein | phrog_600 | unknown function | unknown function | -1 | 7448 | 7996 |
| ATE85972.1 | MF158041_p39 | ribonucleotide triphosphate reductase, large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 22087 | 24321 |
| ATE86046.1 | MF158041_p113 | hypothetical protein | phrog_4385 | unknown function | unknown function | 1 | 77906 | 78199 |
| ATE85941.1 | MF158041_p8 | hypothetical protein | phrog_14219 | unknown function | unknown function | -1 | 3050 | 3211 |
| ATE85937.1 | MF158041_p4 | hypothetical protein | phrog_4401 | unknown function | unknown function | -1 | 1251 | 1547 |
| ATE86048.1 | MF158041_p115 | hypothetical protein | phrog_4109 | unknown function | unknown function | 1 | 78538 | 79131 |
| ATE85982.1 | MF158041_p49 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 28906 | 30897 |
| ATE86010.1 | MF158041_p77 | hypothetical protein | phrog_4141 | unknown function | unknown function | -1 | 47679 | 47978 |
| ATE86037.1 | MF158041_p104 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 72251 | 73666 |
| ATE85938.1 | MF158041_p5 | hypothetical protein | phrog_4190 | unknown function | unknown function | -1 | 1632 | 2144 |
| ATE85940.1 | MF158041_p7 | hypothetical protein | phrog_4495 | unknown function | unknown function | -1 | 2585 | 2965 |
| ATE85986.1 | MF158041_p53 | hypothetical protein | phrog_4039 | unknown function | unknown function | -1 | 32670 | 33110 |
| ATE85950.1 | MF158041_p17 | i-spanin | phrog_1152 | Rz-like spanin | lysis | -1 | 5899 | 6246 |
| ATE85975.1 | MF158041_p42 | phosphoribosyl-ATP pyrophosphohydrolase-like protein | phrog_2144 | MazG-like pyrophosphatase | other | -1 | 25008 | 25763 |
| ATE85934.1 | MF158041_p1 | hypothetical protein | phrog_4327 | unknown function | unknown function | -1 | 82 | 489 |
| ATE85955.1 | MF158041_p22 | rIIA protein | phrog_612 | RIIA lysis inhibitor | lysis | -1 | 9299 | 11671 |
| ATE85949.1 | MF158041_p16 | o-spanin | phrog_4180 | unknown function | unknown function | -1 | 5736 | 5933 |
| ATE86057.1 | MF158041_p124 | hypothetical protein | phrog_4330 | unknown function | unknown function | 1 | 82180 | 82845 |
| ATE85943.1 | MF158041_p10 | hypothetical protein | phrog_15689 | unknown function | unknown function | 1 | 3652 | 3837 |
| ATE86066.1 | MF158041_p133 | hypothetical protein | phrog_3303 | unknown function | unknown function | -1 | 87332 | 87889 |
| ATE86013.1 | MF158041_p80 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | -1 | 50307 | 50723 |
| ATE85984.1 | MF158041_p51 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 31094 | 31834 |
| ATE85994.1 | MF158041_p61 | hypothetical protein | phrog_4427 | unknown function | unknown function | 1 | 37354 | 37560 |
| ATE85976.1 | MF158041_p43 | hypothetical protein | phrog_4442 | unknown function | unknown function | -1 | 25763 | 25978 |
| ATE86026.1 | MF158041_p93 | hypothetical protein | phrog_1732 | unknown function | unknown function | -1 | 59704 | 60153 |
| ATE85942.1 | MF158041_p9 | hypothetical protein | phrog_5293 | unknown function | unknown function | -1 | 3224 | 3430 |
| ATE85993.1 | MF158041_p60 | hypothetical protein | phrog_902 | unknown function | unknown function | 1 | 37107 | 37352 |
| ATE86052.1 | MF158041_p119 | hypothetical protein | phrog_6279 | unknown function | unknown function | 1 | 80642 | 80734 |
| ATE86020.1 | MF158041_p87 | tail tape measure chaperone | phrog_1613 | tail assembly chaperone | tail | -1 | 55958 | 56359 |
| ATE85998.1 | MF158041_p65 | hypothetical protein | phrog_4473 | unknown function | unknown function | 1 | 39812 | 40015 |
| ATE86029.1 | MF158041_p96 | head maturation protease | phrog_53 | head maturation protease | head and packaging | -1 | 61701 | 63047 |
| ATE86041.1 | MF158041_p108 | hypothetical protein | phrog_4463 | unknown function | unknown function | 1 | 75366 | 75734 |
| ATE86019.1 | MF158041_p86 | tail tape measure chaperone | phrog_4963 | tail assembly chaperone | tail | -1 | 55722 | 55949 |
| ATE86063.1 | MF158041_p130 | hypothetical protein | phrog_13570 | unknown function | unknown function | -1 | 86449 | 86646 |
| ATE85939.1 | MF158041_p6 | hypothetical protein | phrog_5089 | unknown function | unknown function | -1 | 2236 | 2493 |
| ATE85999.1 | MF158041_p66 | transcriptional regulatory protein | phrog_1373 | transcriptional regulator | transcription regulation | 1 | 40008 | 40307 |
| ATE86024.1 | MF158041_p91 | hypothetical protein | phrog_2874 | unknown function | unknown function | -1 | 58824 | 59225 |
| ATE86043.1 | MF158041_p110 | lysozyme | phrog_7 | endolysin | lysis | 1 | 76618 | 77082 |
| ATE86055.1 | MF158041_p122 | hypothetical protein | phrog_9967 | unknown function | unknown function | 1 | 81430 | 81726 |
| ATE85987.1 | MF158041_p54 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 33370 | 36069 |
| ATE85989.1 | MF158041_p56 | hypothetical protein | phrog_5180 | unknown function | unknown function | 1 | 36328 | 36537 |
| ATE85988.1 | MF158041_p55 | hypothetical protein | phrog_4230 | unknown function | unknown function | 1 | 36131 | 36331 |
| ATE85965.1 | MF158041_p32 | anaerobic NTP reductase, small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 16756 | 17241 |
| ATE85977.1 | MF158041_p44 | GIY-YIG homing endonuclease | phrog_447 | NAD synthetase | other | -1 | 25980 | 26480 |
| ATE85966.1 | MF158041_p33 | hypothetical protein | phrog_4382 | unknown function | unknown function | -1 | 17241 | 17633 |
| ATE86044.1 | MF158041_p111 | hypothetical protein | phrog_4266 | unknown function | unknown function | 1 | 77133 | 77531 |
| ATE85946.1 | MF158041_p13 | hypothetical protein | phrog_6082 | unknown function | unknown function | -1 | 4923 | 5159 |
| ATE85951.1 | MF158041_p18 | hypothetical protein | phrog_2267 | unknown function | unknown function | -1 | 6299 | 6763 |
| ATE85948.1 | MF158041_p15 | hypothetical protein | phrog_4391 | unknown function | unknown function | -1 | 5470 | 5739 |
| ATE86015.1 | MF158041_p82 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 51361 | 52338 |
| ATE85947.1 | MF158041_p14 | hypothetical protein | phrog_4453 | unknown function | unknown function | -1 | 5134 | 5460 |
| ATE86025.1 | MF158041_p92 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 59222 | 59704 |
| ATE85996.1 | MF158041_p63 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 38087 | 39187 |
| ATE86039.1 | MF158041_p106 | hypothetical protein | phrog_5064 | unknown function | unknown function | 1 | 74505 | 74738 |
| ATE85964.1 | MF158041_p31 | hypothetical protein | phrog_5082 | unknown function | unknown function | -1 | 16473 | 16793 |
| ATE86006.1 | MF158041_p73 | holin | phrog_4038 | unknown function | unknown function | -1 | 43422 | 43796 |
| ATE85944.1 | MF158041_p11 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 3934 | 4728 |
| ATE86038.1 | MF158041_p105 | hypothetical protein | phrog_4114 | unknown function | unknown function | -1 | 73743 | 74114 |
| ATE86047.1 | MF158041_p114 | hypothetical protein | phrog_4040 | unknown function | unknown function | 1 | 78192 | 78536 |
| ATE86001.1 | MF158041_p68 | hypothetical protein | phrog_9143 | unknown function | unknown function | 1 | 40653 | 41156 |
| ATE86036.1 | MF158041_p103 | hypothetical protein | phrog_10765 | unknown function | unknown function | -1 | 68810 | 69022 |
| ATE85958.1 | MF158041_p25 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 12284 | 14101 |
| ATE85968.1 | MF158041_p35 | hypothetical protein | phrog_4532 | unknown function | unknown function | -1 | 20251 | 20451 |
| ATE85991.1 | MF158041_p58 | hypothetical protein | phrog_2381 | unknown function | unknown function | 1 | 36712 | 36855 |
| ATE86028.1 | MF158041_p95 | hypothetical protein | phrog_4146 | tail protease | other | -1 | 61311 | 61688 |
| ATE85962.1 | MF158041_p29 | HNH endonuclease | phrog_4462 | unknown function | unknown function | -1 | 15877 | 16188 |
| ATE85978.1 | MF158041_p45 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 26470 | 27510 |
| ATE85963.1 | MF158041_p30 | hypothetical protein | phrog_4425 | unknown function | unknown function | -1 | 16200 | 16457 |
| ATE86007.1 | MF158041_p74 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 43796 | 43990 |
| ATE86032.1 | MF158041_p99 | hypothetical protein | phrog_113 | portal protein | head and packaging | -1 | 63891 | 65357 |
| ATE86060.1 | MF158041_p127 | hypothetical protein | phrog_4725 | unknown function | unknown function | -1 | 85092 | 85619 |
| ATE85979.1 | MF158041_p46 | hypothetical protein | phrog_3877 | unknown function | unknown function | -1 | 27573 | 28433 |
| ATE86023.1 | MF158041_p90 | hypothetical protein | phrog_4082 | unknown function | unknown function | -1 | 58250 | 58849 |
| ATE86011.1 | MF158041_p78 | hypothetical protein | phrog_4017 | baseplate protein | tail | -1 | 47978 | 48835 |
| ATE85961.1 | MF158041_p28 | hypothetical protein | phrog_3500 | unknown function | unknown function | -1 | 15309 | 15824 |
| ATE85981.1 | MF158041_p48 | hypothetical protein | phrog_4982 | unknown function | unknown function | -1 | 28653 | 28931 |
| ATE86003.1 | MF158041_p70 | hypothetical protein | phrog_2993 | unknown function | unknown function | 1 | 41703 | 41942 |
| ATE85936.1 | MF158041_p3 | hypothetical protein | phrog_4375 | unknown function | unknown function | -1 | 910 | 1257 |
| ATE86061.1 | MF158041_p128 | hypothetical protein | phrog_7482 | unknown function | unknown function | -1 | 85685 | 85825 |
| ATE86040.1 | MF158041_p107 | hypothetical protein | phrog_4034 | unknown function | unknown function | 1 | 74732 | 75322 |