| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF158044 |
Definition |
Shigella phage Sf18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Mooglevirus; unclassified Mooglevirus. |
DB of origin |
NUCCORE |
Length |
90270 |
Host Name |
Shigella flexneri |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
136 |
%GC |
39 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE86395.1 | MF158044_p121 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 78539 | 78988 |
| ATE86350.1 | MF158044_p76 | hypothetical protein | phrog_4401 | unknown function | unknown function | 1 | 48712 | 49008 |
| ATE86349.1 | MF158044_p75 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 48115 | 48627 |
| ATE86304.1 | MF158044_p30 | hypothetical protein | phrog_4469 | unknown function | unknown function | 1 | 18945 | 19145 |
| ATE86386.1 | MF158044_p112 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 70363 | 71097 |
| ATE86398.1 | MF158044_p124 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 79843 | 80442 |
| ATE86403.1 | MF158044_p129 | tail length tape measure protein | phrog_4036 | tail length tape measure protein | tail | 1 | 82970 | 85207 |
| ATE86353.1 | MF158044_p79 | hypothetical protein | phrog_4327 | unknown function | unknown function | 1 | 49719 | 50126 |
| ATE86311.1 | MF158044_p37 | hypothetical protein | phrog_4442 | unknown function | unknown function | 1 | 24057 | 24272 |
| ATE86373.1 | MF158044_p99 | hypothetical protein | phrog_4109 | unknown function | unknown function | -1 | 59296 | 59889 |
| ATE86281.1 | MF158044_p7 | dTMP synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 5453 | 6352 |
| ATE86283.1 | MF158044_p9 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 6896 | 7135 |
| ATE86301.1 | MF158044_p27 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 16925 | 17365 |
| ATE86405.1 | MF158044_p131 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 86013 | 86354 |
| ATE86289.1 | MF158044_p15 | hypothetical protein | phrog_4332 | unknown function | unknown function | -1 | 9029 | 9409 |
| ATE86372.1 | MF158044_p98 | hypothetical protein | phrog_5380 | unknown function | unknown function | -1 | 58484 | 59224 |
| ATE86290.1 | MF158044_p16 | hypothetical protein | phrog_5926 | unknown function | unknown function | -1 | 9767 | 10207 |
| ATE86341.1 | MF158044_p67 | hypothetical protein | phrog_4453 | unknown function | unknown function | 1 | 44797 | 45123 |
| ATE86303.1 | MF158044_p29 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18201 | 18941 |
| ATE86399.1 | MF158044_p125 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 80443 | 81795 |
| ATE86321.1 | MF158044_p47 | hypothetical protein | phrog_4382 | unknown function | unknown function | 1 | 32402 | 32794 |
| ATE86294.1 | MF158044_p20 | hypothetical protein | phrog_902 | unknown function | unknown function | -1 | 12683 | 12928 |
| ATE86376.1 | MF158044_p102 | hypothetical protein | phrog_4348 | unknown function | unknown function | -1 | 60523 | 60903 |
| ATE86329.1 | MF158044_p55 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 35944 | 37761 |
| ATE86352.1 | MF158044_p78 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 49324 | 49629 |
| ATE86396.1 | MF158044_p122 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 79036 | 79470 |
| ATE86308.1 | MF158044_p34 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 21602 | 22462 |
| ATE86309.1 | MF158044_p35 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 22525 | 23565 |
| ATE86292.1 | MF158044_p18 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 11378 | 12478 |
| ATE86343.1 | MF158044_p69 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 45327 | 45527 |
| ATE86286.1 | MF158044_p12 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 8170 | 8529 |
| ATE86310.1 | MF158044_p36 | endonuclease | phrog_447 | NAD synthetase | other | 1 | 23555 | 24055 |
| ATE86277.1 | MF158044_p3 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 1162 | 2337 |
| ATE86363.1 | MF158044_p89 | membrane protein | phrog_4559 | unknown function | unknown function | 1 | 53720 | 53971 |
| ATE86327.1 | MF158044_p53 | hypothetical protein | phrog_4726 | unknown function | unknown function | 1 | 34727 | 35005 |
| ATE86305.1 | MF158044_p31 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 19138 | 21129 |
| ATE86407.1 | MF158044_p133 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 87328 | 87969 |
| ATE86397.1 | MF158044_p123 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 79467 | 79868 |
| ATE86320.1 | MF158044_p46 | anaerobic ribonucleotide reductase, large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 29834 | 31978 |
| ATE86302.1 | MF158044_p28 | hypothetical protein | phrog_4251 | minor tail protein | tail | 1 | 17349 | 18143 |
| ATE86278.1 | MF158044_p4 | tail fiber protein | phrog_4277 | tail fiber protein | tail | 1 | 2383 | 4761 |
| ATE86317.1 | MF158044_p43 | ribonucleoside triphosphate reductase, small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 28276 | 29349 |
| ATE86394.1 | MF158044_p120 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 77413 | 78516 |
| ATE86325.1 | MF158044_p51 | endonuclease | phrog_4462 | unknown function | unknown function | 1 | 33855 | 34166 |
| ATE86392.1 | MF158044_p118 | head maturation protease | phrog_53 | head maturation protease | head and packaging | 1 | 75645 | 76991 |
| ATE86344.1 | MF158044_p70 | macro domain-containing protein | phrog_335 | phosphatase | other | 1 | 45529 | 46323 |
| ATE86366.1 | MF158044_p92 | hypothetical protein | phrog_9967 | unknown function | unknown function | -1 | 56701 | 56997 |
| ATE86275.1 | MF158044_p1 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 3 | 860 |
| ATE86280.1 | MF158044_p6 | holin | phrog_4038 | unknown function | unknown function | 1 | 5042 | 5416 |
| ATE86354.1 | MF158044_p80 | hypothetical protein | phrog_23636 | unknown function | unknown function | 1 | 50199 | 50447 |
| ATE86379.1 | MF158044_p105 | hypothetical protein | phrog_3995 | tail protein | tail | -1 | 61812 | 62696 |
| ATE86342.1 | MF158044_p68 | hypothetical protein | phrog_6082 | unknown function | unknown function | 1 | 45098 | 45334 |
| ATE86356.1 | MF158044_p82 | hypothetical protein | phrog_4640 | unknown function | unknown function | 1 | 51154 | 51384 |
| ATE86358.1 | MF158044_p84 | hypothetical protein | phrog_13570 | unknown function | unknown function | 1 | 51776 | 51973 |
| ATE86361.1 | MF158044_p87 | hypothetical protein | phrog_4725 | unknown function | unknown function | 1 | 52803 | 53330 |
| ATE86381.1 | MF158044_p107 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 63105 | 63695 |
| ATE86299.1 | MF158044_p25 | hypothetical protein | phrog_4230 | unknown function | unknown function | -1 | 13704 | 13904 |
| ATE86315.1 | MF158044_p41 | ribonucleoside triphosphate reductase, large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 25714 | 27948 |
| ATE86284.1 | MF158044_p10 | hypothetical protein | phrog_4422 | unknown function | unknown function | -1 | 7165 | 7680 |
| ATE86282.1 | MF158044_p8 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 6354 | 6899 |
| ATE86279.1 | MF158044_p5 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 4848 | 5042 |
| ATE86410.1 | MF158044_p136 | baseplate assembly protein | phrog_6 | baseplate wedge subunit | tail | 1 | 89314 | 90270 |
| ATE86369.1 | MF158044_p95 | hypothetical protein | phrog_6279 | unknown function | unknown function | -1 | 57692 | 57784 |
| ATE86384.1 | MF158044_p110 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 64763 | 66178 |
| ATE86370.1 | MF158044_p96 | hypothetical protein | phrog_4343 | unknown function | unknown function | -1 | 57766 | 58272 |
| ATE86293.1 | MF158044_p19 | hypothetical protein | phrog_4427 | unknown function | unknown function | -1 | 12475 | 12681 |
| ATE86389.1 | MF158044_p115 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 73335 | 74801 |
| ATE86338.1 | MF158044_p64 | i-spanin | phrog_1152 | Rz-like spanin | lysis | 1 | 44011 | 44358 |
| ATE86393.1 | MF158044_p119 | hypothetical protein | phrog_4146 | tail protease | other | 1 | 77004 | 77381 |
| ATE86285.1 | MF158044_p11 | hypothetical protein | phrog_9143 | unknown function | unknown function | -1 | 7682 | 8185 |
| ATE86374.1 | MF158044_p100 | hypothetical protein | phrog_4040 | unknown function | unknown function | -1 | 59891 | 60235 |
| ATE86307.1 | MF158044_p33 | hypothetical protein | phrog_4424 | unknown function | unknown function | 1 | 21379 | 21516 |
| ATE86318.1 | MF158044_p44 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 29349 | 29591 |
| ATE86323.1 | MF158044_p49 | hypothetical protein | phrog_5082 | unknown function | unknown function | 1 | 33305 | 33562 |
| ATE86402.1 | MF158044_p128 | tape measure chaperone | phrog_4963 | tail assembly chaperone | tail | 1 | 82743 | 82970 |
| ATE86313.1 | MF158044_p39 | deoxyribonucleoside reductase | phrog_4007 | unknown function | unknown function | 1 | 25008 | 25334 |
| ATE86348.1 | MF158044_p74 | hypothetical protein | phrog_5089 | unknown function | unknown function | 1 | 47766 | 48023 |
| ATE86339.1 | MF158044_p65 | o-spanin | phrog_4180 | unknown function | unknown function | 1 | 44324 | 44518 |
| ATE86362.1 | MF158044_p88 | hypothetical protein | phrog_7022 | unknown function | unknown function | 1 | 53391 | 53654 |
| ATE86316.1 | MF158044_p42 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 28082 | 28279 |
| ATE86314.1 | MF158044_p40 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 25327 | 25662 |
| ATE86319.1 | MF158044_p45 | hypothetical protein | phrog_4532 | unknown function | unknown function | 1 | 29584 | 29784 |
| ATE86346.1 | MF158044_p72 | hypothetical protein | phrog_14219 | unknown function | unknown function | 1 | 47046 | 47204 |
| ATE86387.1 | MF158044_p113 | hypothetical protein | phrog_4397 | unknown function | unknown function | 1 | 71493 | 71699 |
| ATE86334.1 | MF158044_p60 | rIIB | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 41038 | 42159 |
| ATE86383.1 | MF158044_p109 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 64313 | 64684 |
| ATE86291.1 | MF158044_p17 | hypothetical protein | phrog_4652 | unknown function | unknown function | -1 | 10210 | 10797 |
| ATE86355.1 | MF158044_p81 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 50533 | 51090 |
| ATE86330.1 | MF158044_p56 | hypothetical protein | phrog_2375 | unknown function | unknown function | 1 | 37815 | 38030 |
| ATE86382.1 | MF158044_p108 | hypothetical protein | phrog_5064 | unknown function | unknown function | -1 | 63689 | 63922 |
| ATE86404.1 | MF158044_p130 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 85207 | 86013 |
| ATE86365.1 | MF158044_p91 | hypothetical protein | phrog_4713 | unknown function | unknown function | -1 | 56280 | 56714 |
| ATE86326.1 | MF158044_p52 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 34219 | 34734 |
| ATE86312.1 | MF158044_p38 | phosphoribosyl-ATP pyrophosphohydrolase-like protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 24272 | 25027 |
| ATE86300.1 | MF158044_p26 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 13966 | 16665 |
| ATE86388.1 | MF158044_p114 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 71721 | 73322 |
| ATE86336.1 | MF158044_p62 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | 1 | 42787 | 43482 |
| ATE86401.1 | MF158044_p127 | tape measure chaperone | phrog_1613 | tail assembly chaperone | tail | 1 | 82333 | 82734 |
| ATE86287.1 | MF158044_p13 | helix-turn-helix transcriptional regulator | phrog_1373 | transcriptional regulator | transcription regulation | -1 | 8531 | 8830 |
| ATE86357.1 | MF158044_p83 | hypothetical protein | phrog_10118 | unknown function | unknown function | 1 | 51385 | 51684 |
| ATE86380.1 | MF158044_p106 | hypothetical protein | phrog_4463 | unknown function | unknown function | -1 | 62693 | 63061 |
| ATE86385.1 | MF158044_p111 | hypothetical protein | phrog_14202 | unknown function | unknown function | 1 | 69691 | 69918 |
| ATE86364.1 | MF158044_p90 | hypothetical protein | phrog_4330 | unknown function | unknown function | -1 | 55612 | 56277 |
| ATE86295.1 | MF158044_p21 | hypothetical protein | phrog_9065 | unknown function | unknown function | -1 | 12939 | 13190 |
| ATE86333.1 | MF158044_p59 | rIIA | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 38586 | 40958 |
| ATE86359.1 | MF158044_p85 | hypothetical protein | phrog_4318 | unknown function | unknown function | 1 | 52059 | 52400 |
| ATE86298.1 | MF158044_p24 | hypothetical protein | phrog_5180 | unknown function | unknown function | -1 | 13498 | 13707 |
| ATE86367.1 | MF158044_p93 | hypothetical protein | phrog_7193 | unknown function | unknown function | -1 | 57000 | 57443 |
| ATE86371.1 | MF158044_p97 | hypothetical protein | phrog_4459 | unknown function | unknown function | -1 | 58269 | 58487 |
| ATE86347.1 | MF158044_p73 | hypothetical protein | phrog_4495 | unknown function | unknown function | 1 | 47294 | 47674 |
| ATE86406.1 | MF158044_p132 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 86354 | 87331 |
| ATE86345.1 | MF158044_p71 | hypothetical protein | phrog_5293 | unknown function | unknown function | 1 | 46828 | 47034 |
| ATE86351.1 | MF158044_p77 | hypothetical protein | phrog_4375 | unknown function | unknown function | 1 | 49002 | 49349 |
| ATE86340.1 | MF158044_p66 | hypothetical protein | phrog_4391 | unknown function | unknown function | 1 | 44518 | 44787 |
| ATE86288.1 | MF158044_p14 | hypothetical protein | phrog_4473 | unknown function | unknown function | -1 | 8823 | 9026 |
| ATE86400.1 | MF158044_p126 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 81810 | 82256 |
| ATE86276.1 | MF158044_p2 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 860 | 1159 |
| ATE86331.1 | MF158044_p57 | hypothetical protein | phrog_4262 | unknown function | unknown function | 1 | 38027 | 38362 |
| ATE86375.1 | MF158044_p101 | hypothetical protein | phrog_4385 | unknown function | unknown function | -1 | 60228 | 60521 |
| ATE86332.1 | MF158044_p58 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 38344 | 38523 |
| ATE86337.1 | MF158044_p63 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 43494 | 43958 |
| ATE86409.1 | MF158044_p135 | baseplate assembly protein | phrog_6 | baseplate wedge subunit | tail | 1 | 88385 | 89392 |
| ATE86378.1 | MF158044_p104 | lysozyme | phrog_7 | endolysin | lysis | -1 | 61345 | 61809 |
| ATE86368.1 | MF158044_p94 | hypothetical protein | phrog_4457 | unknown function | unknown function | -1 | 57486 | 57695 |
| ATE86391.1 | MF158044_p117 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 75301 | 75633 |
| ATE86296.1 | MF158044_p22 | hypothetical protein | phrog_2381 | unknown function | unknown function | -1 | 13180 | 13323 |
| ATE86377.1 | MF158044_p103 | hypothetical protein | phrog_4266 | unknown function | unknown function | -1 | 60896 | 61306 |
| ATE86360.1 | MF158044_p86 | membrane protein | phrog_7482 | unknown function | unknown function | 1 | 52598 | 52738 |
| ATE86328.1 | MF158044_p54 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 35018 | 35899 |
| ATE86335.1 | MF158044_p61 | lysozyme domain-containing protein | phrog_600 | unknown function | unknown function | 1 | 42261 | 42809 |
| ATE86322.1 | MF158044_p48 | anaerobic ribonucleotide reductase, small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 32794 | 33279 |
| ATE86390.1 | MF158044_p116 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 74801 | 75301 |
| ATE86324.1 | MF158044_p50 | hypothetical protein | phrog_4425 | unknown function | unknown function | 1 | 33580 | 33843 |
| ATE86297.1 | MF158044_p23 | hypothetical protein | phrog_3474 | unknown function | unknown function | -1 | 13310 | 13501 |
| ATE86408.1 | MF158044_p134 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 87969 | 88385 |
| ATE86306.1 | MF158044_p32 | hypothetical protein | phrog_4982 | unknown function | unknown function | 1 | 21104 | 21382 |