Genomic map of Streptococcus phage D4276 (MF161328)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF161328
Definition
Streptococcus phage D4276, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
NUCCORE
Length
39707
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
38.03
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASD51001.1 MF161328_p41 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 32159 32941
ASD51005.1 MF161328_p45 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34937 35389
ASD50990.1 MF161328_p30 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 25078 26313
ASD50968.1 MF161328_p8 head-tail joining protein phrog_25 head closure Hc1 connector 1 5983 6333
ASD51009.1 MF161328_p49 hypothetical protein phrog_1489 unknown function unknown function 1 36539 36694
ASD50998.1 MF161328_p38 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 30654 30866
ASD50972.1 MF161328_p12 tail component protein phrog_1346 tail protein tail 1 7849 8202
ASD50988.1 MF161328_p28 AcrIIA5 phrog_14794 unknown function unknown function 1 24283 24705
ASD50965.1 MF161328_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3778 4446
ASD51004.1 MF161328_p44 nuclease phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 34086 34922
ASD50971.1 MF161328_p11 major tail protein phrog_88 major tail protein tail 1 7160 7771
ASD50981.1 MF161328_p21 hypothetical protein phrog_1863 unknown function unknown function 1 20969 21193
ASD50973.1 MF161328_p13 hypothetical protein phrog_2629 unknown function unknown function 1 8250 8393
ASD50989.1 MF161328_p29 hypothetical protein phrog_27058 unknown function unknown function 1 24705 25076
ASD50969.1 MF161328_p9 tail component protein phrog_5 tail completion or Neck1 protein connector 1 6340 6762
ASD50967.1 MF161328_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5669 5983
ASD50962.1 MF161328_p2 large subunit terminase phrog_9 terminase large subunit head and packaging 1 568 2439
ASD50992.1 MF161328_p32 chromosome partitioning protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 27552 28064
ASD50964.1 MF161328_p4 portal protein phrog_12 portal protein head and packaging 1 2640 3791
ASD51014.1 MF161328_p54 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39179 39613
ASD50975.1 MF161328_p15 tail component protein phrog_202 distal tail protein Dit tail 1 13009 14574
ASD50997.1 MF161328_p37 anti-repressor protein phrog_2902 anti-repressor transcription regulation 1 29987 30526
ASD50985.1 MF161328_p25 lysin phrog_4238 endolysin lysis 1 23157 23384
ASD50977.1 MF161328_p17 tail protein phrog_18627 tail protein tail 1 18050 18952
ASD50994.1 MF161328_p34 hypothetical protein phrog_11483 unknown function unknown function 1 28294 28551
ASD50993.1 MF161328_p33 hypothetical protein phrog_1529 unknown function unknown function 1 28061 28279
ASD50999.1 MF161328_p39 hypothetical protein phrog_1022 unknown function unknown function 1 30894 31028
ASD50991.1 MF161328_p31 phosphoadenosine phosphosulfate reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 26297 27568
ASD51013.1 MF161328_p53 transcriptional regulator phrog_36 transcriptional regulator transcription regulation 1 38585 38983
ASD50983.1 MF161328_p23 lysin phrog_998 endolysin lysis 1 21525 22127
ASD51000.1 MF161328_p40 DNA replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 31341 32147
ASD50970.1 MF161328_p10 tail component protein phrog_1217 tail protein tail 1 6767 7138
ASD50987.1 MF161328_p27 hypothetical protein phrog_8487 unknown function unknown function 1 23936 24256
ASD51007.1 MF161328_p47 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35817 36296
ASD50979.1 MF161328_p19 hypothetical protein phrog_1060 unknown function unknown function 1 20388 20774
ASD51008.1 MF161328_p48 hypothetical protein phrog_1982 unknown function unknown function 1 36286 36522
ASD50966.1 MF161328_p6 major capsid protein phrog_10 major head protein head and packaging 1 4461 5654
ASD50963.1 MF161328_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2443 2622
ASD50982.1 MF161328_p22 holin phrog_297 holin lysis 1 21281 21523
ASD50980.1 MF161328_p20 hypothetical protein phrog_1382 unknown function unknown function 1 20752 20943
ASD50984.1 MF161328_p24 endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22334 23095
ASD50978.1 MF161328_p18 minor structural protein phrog_372 tail protein tail 1 18915 20372
ASD50996.1 MF161328_p36 hypothetical protein phrog_1733 unknown function unknown function 1 29050 29994
ASD51012.1 MF161328_p52 hypothetical protein phrog_1814 unknown function unknown function 1 37516 38223
ASD50986.1 MF161328_p26 hypothetical protein singleton unknown function unknown function -1 23375 23683
ASD50976.1 MF161328_p16 receptor binding protein phrog_588 tail fiber protein and host specificity tail 1 14574 18047
ASD50974.1 MF161328_p14 tape measure protein phrog_167 tail length tape measure protein tail 1 8420 13012
ASD51003.1 MF161328_p43 RecT recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 33260 34093
ASD51011.1 MF161328_p51 hypothetical protein phrog_884 unknown function unknown function 1 37217 37519
ASD50961.1 MF161328_p1 small subunit terminase phrog_83 terminase small subunit head and packaging 1 88 546
ASD50995.1 MF161328_p35 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 28797 29000
ASD51002.1 MF161328_p42 hypothetical protein phrog_3159 unknown function unknown function 1 32938 33135
ASD51006.1 MF161328_p46 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35399 35827
ASD51010.1 MF161328_p50 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 36736 37242