| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF161328 |
Definition |
Streptococcus phage D4276, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
39707 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
38.03 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASD51001.1 | MF161328_p41 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 32159 | 32941 |
| ASD51005.1 | MF161328_p45 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34937 | 35389 |
| ASD50990.1 | MF161328_p30 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 25078 | 26313 |
| ASD50968.1 | MF161328_p8 | head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 5983 | 6333 |
| ASD51009.1 | MF161328_p49 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 36539 | 36694 |
| ASD50998.1 | MF161328_p38 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30654 | 30866 |
| ASD50972.1 | MF161328_p12 | tail component protein | phrog_1346 | tail protein | tail | 1 | 7849 | 8202 |
| ASD50988.1 | MF161328_p28 | AcrIIA5 | phrog_14794 | unknown function | unknown function | 1 | 24283 | 24705 |
| ASD50965.1 | MF161328_p5 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 3778 | 4446 |
| ASD51004.1 | MF161328_p44 | nuclease | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34086 | 34922 |
| ASD50971.1 | MF161328_p11 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7160 | 7771 |
| ASD50981.1 | MF161328_p21 | hypothetical protein | phrog_1863 | unknown function | unknown function | 1 | 20969 | 21193 |
| ASD50973.1 | MF161328_p13 | hypothetical protein | phrog_2629 | unknown function | unknown function | 1 | 8250 | 8393 |
| ASD50989.1 | MF161328_p29 | hypothetical protein | phrog_27058 | unknown function | unknown function | 1 | 24705 | 25076 |
| ASD50969.1 | MF161328_p9 | tail component protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6340 | 6762 |
| ASD50967.1 | MF161328_p7 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5669 | 5983 |
| ASD50962.1 | MF161328_p2 | large subunit terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 568 | 2439 |
| ASD50992.1 | MF161328_p32 | chromosome partitioning protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 27552 | 28064 |
| ASD50964.1 | MF161328_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2640 | 3791 |
| ASD51014.1 | MF161328_p54 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39179 | 39613 |
| ASD50975.1 | MF161328_p15 | tail component protein | phrog_202 | distal tail protein Dit | tail | 1 | 13009 | 14574 |
| ASD50997.1 | MF161328_p37 | anti-repressor protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 29987 | 30526 |
| ASD50985.1 | MF161328_p25 | lysin | phrog_4238 | endolysin | lysis | 1 | 23157 | 23384 |
| ASD50977.1 | MF161328_p17 | tail protein | phrog_18627 | tail protein | tail | 1 | 18050 | 18952 |
| ASD50994.1 | MF161328_p34 | hypothetical protein | phrog_11483 | unknown function | unknown function | 1 | 28294 | 28551 |
| ASD50993.1 | MF161328_p33 | hypothetical protein | phrog_1529 | unknown function | unknown function | 1 | 28061 | 28279 |
| ASD50999.1 | MF161328_p39 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 30894 | 31028 |
| ASD50991.1 | MF161328_p31 | phosphoadenosine phosphosulfate reductase | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 26297 | 27568 |
| ASD51013.1 | MF161328_p53 | transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 38585 | 38983 |
| ASD50983.1 | MF161328_p23 | lysin | phrog_998 | endolysin | lysis | 1 | 21525 | 22127 |
| ASD51000.1 | MF161328_p40 | DNA replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 31341 | 32147 |
| ASD50970.1 | MF161328_p10 | tail component protein | phrog_1217 | tail protein | tail | 1 | 6767 | 7138 |
| ASD50987.1 | MF161328_p27 | hypothetical protein | phrog_8487 | unknown function | unknown function | 1 | 23936 | 24256 |
| ASD51007.1 | MF161328_p47 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35817 | 36296 |
| ASD50979.1 | MF161328_p19 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20388 | 20774 |
| ASD51008.1 | MF161328_p48 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 36286 | 36522 |
| ASD50966.1 | MF161328_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4461 | 5654 |
| ASD50963.1 | MF161328_p3 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2443 | 2622 |
| ASD50982.1 | MF161328_p22 | holin | phrog_297 | holin | lysis | 1 | 21281 | 21523 |
| ASD50980.1 | MF161328_p20 | hypothetical protein | phrog_1382 | unknown function | unknown function | 1 | 20752 | 20943 |
| ASD50984.1 | MF161328_p24 | endonuclease | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22334 | 23095 |
| ASD50978.1 | MF161328_p18 | minor structural protein | phrog_372 | tail protein | tail | 1 | 18915 | 20372 |
| ASD50996.1 | MF161328_p36 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 29050 | 29994 |
| ASD51012.1 | MF161328_p52 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 37516 | 38223 |
| ASD50986.1 | MF161328_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23375 | 23683 |
| ASD50976.1 | MF161328_p16 | receptor binding protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14574 | 18047 |
| ASD50974.1 | MF161328_p14 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8420 | 13012 |
| ASD51003.1 | MF161328_p43 | RecT recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 33260 | 34093 |
| ASD51011.1 | MF161328_p51 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 37217 | 37519 |
| ASD50961.1 | MF161328_p1 | small subunit terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 88 | 546 |
| ASD50995.1 | MF161328_p35 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 28797 | 29000 |
| ASD51002.1 | MF161328_p42 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 32938 | 33135 |
| ASD51006.1 | MF161328_p46 | endodeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35399 | 35827 |
| ASD51010.1 | MF161328_p50 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36736 | 37242 |