Genomic map of Mycobacterium phage AlleyCat (MF185717)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF185717
Definition
Mycobacterium phage AlleyCat, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
62112
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
65.34
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASM62552.1 MF185717_p45 hypothetical protein singleton unknown function unknown function 1 35388 35513
ASM62594.1 MF185717_p87 hypothetical protein phrog_20186 unknown function unknown function 1 56094 56273
ASM62533.1 MF185717_p26 hypothetical protein phrog_10753 unknown function unknown function 1 23707 23991
ASM62518.1 MF185717_p11 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 9056 9439
ASM62522.1 MF185717_p15 major tail subunit phrog_117 major tail protein tail 1 10500 11111
ASM62580.1 MF185717_p73 hypothetical protein phrog_2869 unknown function unknown function 1 49309 49506
ASM62583.1 MF185717_p76 hypothetical protein phrog_9980 unknown function unknown function 1 50302 50883
ASM62595.1 MF185717_p88 hypothetical protein phrog_9985 unknown function unknown function 1 56337 56615
ASM62601.1 MF185717_p94 hypothetical protein phrog_8588 unknown function unknown function 1 59800 60111
ASM62544.1 MF185717_p37 hydrolase phrog_21189 hydrolase other -1 31071 31202
ASM62557.1 MF185717_p50 hypothetical protein phrog_9124 unknown function unknown function 1 37492 37716
ASM62605.1 MF185717_p98 hypothetical protein phrog_10816 unknown function unknown function 1 61513 61695
ASM62531.1 MF185717_p24 minor tail protein phrog_1736 minor tail protein tail 1 20892 21209
ASM62581.1 MF185717_p74 hypothetical protein phrog_3868 unknown function unknown function 1 49520 50002
ASM62551.1 MF185717_p44 hypothetical protein singleton unknown function unknown function 1 35158 35391
ASM62558.1 MF185717_p51 hypothetical protein phrog_1956 unknown function unknown function 1 37713 37991
ASM62603.1 MF185717_p96 hypothetical protein phrog_10342 DNA binding protein DNA, RNA and nucleotide metabolism 1 60311 60703
ASM62588.1 MF185717_p81 hypothetical protein phrog_2493 unknown function unknown function 1 53522 54193
ASM62521.1 MF185717_p14 head-to-tail connector protein phrog_123 tail terminator connector 1 10036 10458
ASM62600.1 MF185717_p93 hypothetical protein phrog_6842 unknown function unknown function 1 59367 59699
ASM62508.1 MF185717_p1 hypothetical protein phrog_10556 unknown function unknown function 1 55 303
ASM62565.1 MF185717_p58 hypothetical protein phrog_1581 unknown function unknown function 1 39910 40122
ASM62582.1 MF185717_p75 hypothetical protein phrog_8324 unknown function unknown function 1 49999 50232
ASM62525.1 MF185717_p18 tape measure protein phrog_971 endolysin lysis 1 12112 16224
ASM62577.1 MF185717_p70 hypothetical protein phrog_2342 unknown function unknown function 1 47878 48732
ASM62606.1 MF185717_p99 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61692 61997
ASM62586.1 MF185717_p79 hypothetical protein phrog_2822 unknown function unknown function 1 52608 53252
ASM62510.1 MF185717_p3 hypothetical protein phrog_2293 unknown function unknown function 1 542 772
ASM62515.1 MF185717_p8 hypothetical protein phrog_1757 unknown function unknown function 1 7021 7221
ASM62599.1 MF185717_p92 hypothetical protein phrog_7638 unknown function unknown function 1 58281 59156
ASM62539.1 MF185717_p32 hypothetical protein phrog_404 minor tail protein tail 1 28365 28694
ASM62598.1 MF185717_p91 hypothetical protein phrog_2974 unknown function unknown function 1 57918 58163
ASM62535.1 MF185717_p28 hypothetical protein phrog_240 head protein head and packaging 1 25101 25499
ASM62593.1 MF185717_p86 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 55143 56027
ASM62576.1 MF185717_p69 hypothetical protein phrog_11424 unknown function unknown function 1 47717 47881
ASM62570.1 MF185717_p63 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41814 42194
ASM62556.1 MF185717_p49 hypothetical protein phrog_301 secreted protein other 1 37151 37489
ASM62538.1 MF185717_p31 holin phrog_565 holin lysis 1 27916 28368
ASM62520.1 MF185717_p13 head-to-tail connector protein phrog_387 neck protein connector 1 9830 10039
ASM62548.1 MF185717_p41 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 33980 34384
ASM62568.1 MF185717_p61 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 41081 41329
ASM62604.1 MF185717_p97 hypothetical protein phrog_12460 unknown function unknown function 1 61228 61500
ASM62541.1 MF185717_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28929 30143
ASM62509.1 MF185717_p2 hypothetical protein phrog_2074 unknown function unknown function 1 300 545
ASM62597.1 MF185717_p90 hypothetical protein phrog_2433 unknown function unknown function 1 57150 57836
ASM62571.1 MF185717_p64 DNA primase/polymerase phrog_10729 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 42225 44393
ASM62550.1 MF185717_p43 hypothetical protein phrog_2908 unknown function unknown function 1 34871 35161
ASM62513.1 MF185717_p6 portal protein phrog_104 portal protein head and packaging 1 2788 4326
ASM62536.1 MF185717_p29 lysin A phrog_317 endolysin lysis 1 25527 27161
ASM62514.1 MF185717_p7 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4289 7024
ASM62572.1 MF185717_p65 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 44390 46105
ASM62567.1 MF185717_p60 hypothetical protein phrog_1911 unknown function unknown function 1 40379 40972
ASM62592.1 MF185717_p85 hypothetical protein phrog_19954 unknown function unknown function 1 54924 55091
ASM62560.1 MF185717_p53 hypothetical protein phrog_4832 unknown function unknown function 1 38166 38330
ASM62574.1 MF185717_p67 peptidase phrog_908 unknown function unknown function 1 46549 47403
ASM62563.1 MF185717_p56 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 38832 39692
ASM62530.1 MF185717_p23 minor tail protein phrog_1565 minor tail protein tail 1 19807 20892
ASM62543.1 MF185717_p36 HTH DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30489 30953
ASM62526.1 MF185717_p19 minor tail protein phrog_106 minor tail protein tail 1 16301 17431
ASM62547.1 MF185717_p40 hypothetical protein phrog_950 unknown function unknown function -1 33002 33853
ASM62537.1 MF185717_p30 lysin B phrog_102 endolysin lysis 1 27158 27919
ASM62573.1 MF185717_p66 resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 46184 46549
ASM62545.1 MF185717_p38 integrase phrog_95 integrase integration and excision 1 31272 32717
ASM62527.1 MF185717_p20 minor tail protein phrog_110 minor tail protein tail 1 17473 18690
ASM62555.1 MF185717_p48 hypothetical protein phrog_7933 unknown function unknown function 1 36887 37105
ASM62517.1 MF185717_p10 major capsid protein phrog_10 major head protein head and packaging 1 7993 8925
ASM62587.1 MF185717_p80 hypothetical protein phrog_16134 unknown function unknown function 1 53245 53529
ASM62523.1 MF185717_p17 tail assembly chaperone phrog_1861 unknown function unknown function 1 11208 11699
ASM62529.1 MF185717_p22 minor tail protein phrog_1697 minor tail protein tail 1 19301 19810
ASM62542.1 MF185717_p35 hypothetical protein phrog_1042 unknown function unknown function 1 30143 30367
ASM62540.1 MF185717_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28691 28942
ASM62532.1 MF185717_p25 minor tail protein phrog_346 minor tail protein tail 1 21193 23697
ASM62591.1 MF185717_p84 hypothetical protein phrog_19470 unknown function unknown function 1 54737 54889
ASM62519.1 MF185717_p12 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9439 9801
ASM62546.1 MF185717_p39 hypothetical protein phrog_24177 unknown function unknown function 1 32836 32982
ASM62562.1 MF185717_p55 hypothetical protein phrog_1498 unknown function unknown function 1 38668 38835
ASM62511.1 MF185717_p4 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 997 1356
ASM62589.1 MF185717_p82 hypothetical protein phrog_980 unknown function unknown function 1 54184 54471
ASM62585.1 MF185717_p78 hypothetical protein phrog_3167 unknown function unknown function 1 52246 52608
ASM62564.1 MF185717_p57 hypothetical protein phrog_10500 unknown function unknown function 1 39689 39913
ASM62524.1 MF185717_p16 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11208 12094
ASM62528.1 MF185717_p21 minor tail protein phrog_20962 minor tail protein tail 1 18767 19300
ASM62579.1 MF185717_p72 hypothetical protein phrog_5135 unknown function unknown function 1 48977 49312
ASM62584.1 MF185717_p77 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 51036 52241
ASM62512.1 MF185717_p5 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1349 2776
ASM62602.1 MF185717_p95 hypothetical protein phrog_38546 unknown function unknown function 1 60160 60321
ASM62534.1 MF185717_p27 minor tail protein phrog_416 minor tail protein tail 1 24010 25074
ASM62569.1 MF185717_p62 HNH endonuclease phrog_10696 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41326 41817
ASM62566.1 MF185717_p59 hypothetical protein phrog_2388 unknown function unknown function 1 40119 40298
ASM62554.1 MF185717_p47 hypothetical protein phrog_2781 unknown function unknown function 1 36277 36879
ASM62559.1 MF185717_p52 hypothetical protein phrog_10462 unknown function unknown function 1 37988 38143
ASM62575.1 MF185717_p68 hypothetical protein phrog_5505 unknown function unknown function 1 47473 47682
ASM62596.1 MF185717_p89 hypothetical protein phrog_10190 DNA binding protein DNA, RNA and nucleotide metabolism 1 56617 57015
ASM62549.1 MF185717_p42 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 34517 34864
ASM62578.1 MF185717_p71 hypothetical protein phrog_7217 unknown function unknown function 1 48729 48980
ASM62516.1 MF185717_p9 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7355 7921
ASM62590.1 MF185717_p83 hypothetical protein phrog_3665 unknown function unknown function 1 54468 54611
ASM62561.1 MF185717_p54 hypothetical protein phrog_2870 unknown function unknown function 1 38399 38671
ASM62553.1 MF185717_p46 hypothetical protein phrog_2286 unknown function unknown function 1 35510 36238